Clarias gariepinus (North African catfish): 128529220
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Entry
128529220 CDS
T10780
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128529220 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128529220 (papolg)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128529220 (papolg)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
128529220 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
128529220
NCBI-ProteinID:
XP_053358592
LinkDB
All DBs
Position
8:complement(14927312..14940584)
Genome browser
AA seq
750 aa
AA seq
DB search
MKEMSASSGNNMLGGQQPQKHYGITSSISLAFPREIDHMYTQKLIEAMKPFGVFEDEDEL
NHRLAVLGKLNSFVKEWIAEISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALC
VAPRHVERSDFFTSFFEKLKQHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSI
PDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYS
NMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLP
VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLTVTDEILQGKAEW
SKLFEPPNFFQKYKHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNP
QSFPWSKEGRSENDFISMWFIGIIFKKLENADCVNIDLTYDIQSFTDTVYRQASNINMLK
DGMTIEATHVRKKQLHQYLPAELVQRGKKKSLGDLNRSSNGGGSKRCSLDGSQLDSSRDT
DTGTPFSSPTPVTKSCKSASTPEDSITPPKPSVPMFVDSSPSPSSPPKKEPGMSIPVIGA
KTSVTQVAKPTVPVTGSTIPTVVGRNVMPRLSPPNTSSSDLANGVNGAAPKRPHSPSLEE
PHKKLKDTEPQVFSGDYTFKEPYPPSSNGQETVDDPAGDGHAFTKPMPIPTIDTSRTQRL
PSKELPDASSPVPTSNLRVIKNSIRLTLNR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcagccagttcgggaaataatatgcttggtgggcagcagcctcagaaa
cactatggcatcacatcctcaatcagcctggcctttccccgtgaaatcgatcacatgtac
acccagaaactcatagaggccatgaaaccttttggagtgtttgaggatgaagatgagctt
aatcacaggcttgcagttcttggtaaactgaattcatttgttaaagagtggattgcagag
atcagtgaatcaaagaatctgccaccctcagctgtagcaaacgttgggggcaaaattttt
acctttgggtcttatagactgggagtgcacacaaaaggtgctgatatagatgccttgtgt
gtggcaccccgtcatgtcgaaaggagtgattttttcacatctttttttgaaaaactcaaa
cagcacgatgagatcaaggatctacgggctgtagaagatgcatttgtaccagtgattaaa
ttcaagtttgatggaattgagattgatcttctttttgcaaggcttgccctgcagtcaatc
ccagataacctggaccttagaggagattcgctgctcagaaacctggatattagatgtatt
cgcagtttaaatggttgtcgtgttactgatgaaatcctgtacttggtgcccaacaaagag
aacttcagacttactctacgggccatcaaactgtgggctaagcgtcgtgggatttactcc
aacatgcttggattccttggtggtgtctcttgggccatgctggtggccagaacctgtcaa
ctttacccaaatgctgtggctgccacacttgtgcacaaatttttccttgtcttctccaaa
tgggagtggccaaaccctgtgcttttaaagcaacctgaagatagtaacttgaatctgcca
gtctgggatccacgggtaaacccatcggacaggtaccatttgatgccgattatcacacct
gcatatccccagcagaattctacctacaacgtgtcaacctccactcgtaccatcatgagc
gaagaatttaaatatggccttacagttacagatgaaatccttcagggtaaggctgaatgg
tccaagttgttcgagccaccaaacttttttcaaaaatacaaacattacattgtgcttact
gccagtgcatcaacagaggagaaccaccttgaatgggttggtttggttgagtcgaagatt
agagtcctggttggcaatttggagcgaaatgagtacatcactcttgctcacgtgaatcca
cagtcttttccctggtcgaaggagggtcgtagtgaaaatgacttcatttcgatgtggttc
attggaataattttcaaaaagttggagaatgctgactgtgtgaacattgatctgacttat
gacatacagtcctttacagacactgtctacaggcaagccagtaacattaacatgctaaag
gatgggatgaccatcgaagccacacatgtgagaaagaagcagcttcatcagtacttgcct
gctgagctcgtgcaaagaggcaagaagaagagcttgggagatctgaatcgcagttcaaat
ggtggtgggtctaagcgctgttcactggatggcagtcaactggacagttccagagacaca
gatacaggaaccccgttcagctctcctaccccagtcaccaaaagctgcaagtcagcctcc
actcctgaagacagcattaccccacccaagccttcagttcccatgtttgtggatagctcc
ccatctccatcatctcctccaaagaaagagccaggaatgtcaattccagttatcggagca
aagacatcagtcactcaggtggccaagcccacagtgcctgtcacagggagtacgattcca
acggtggtgggccgaaacgtaatgccacgcctgagccctcccaacaccagctcatctgac
ctggccaatggtgttaatggagctgcacccaagaggccccactcaccttcactggaggaa
ccacacaagaaactaaaggacacagagccgcaggtcttctctggtgattatacatttaag
gaaccataccctccttcctctaatggccaggaaacagttgatgacccagcaggggatggt
catgcttttacaaagcctatgcccattcccactattgatacatcaaggacacagagactg
cccagtaaagaactgccagatgcgtcttcaccagtacctacaagcaacctgcgcgtcata
aagaactcaatcagactcactcttaaccgatag
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