Clarias gariepinus (North African catfish): 128529297
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Entry
128529297 CDS
T10780
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128529297
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Gene cluster
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Motif
Pfam:
V-set
Ig_3
C1-set
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
128529297
NCBI-ProteinID:
XP_053358685
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Position
8:complement(5303263..5311119)
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AA seq
439 aa
AA seq
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MKDISTIYKLSVIAFALLEGVCTSSRCSVLECWFVQERPGGGGFSAGMSQEKAALYIRTD
SEKIEQKSPSDIDPSRIYYVSDPASTFCSAALHPPEGTVNKPQCEINPFNPQASMVKWAA
PLTASAQSPIYLHADWFSVAAQGLNKELTLANVMRAPSGSKEPSVILSVSSKTSAVQSRL
GEPVLLDCGFWVNPSSPLHDSGFAVEWRYQFRGEGRLIVAYDGKNDRFAESSETDGDLDI
VGLYKTGNASLVLKEAQVRHVGTYICTVYLPHLLAQVALELEIVEPPSLAVYPSPLPLSV
PGQVVTVHCEASGFYPLSLDLDWEFTDAEGKKRSLGQGSVTGHRQARDGTFSQSSRLELD
SYKMDLGRGGELSCVAKHQGGTRRAMVAVNVIGVSAPSIEDSMAMVAVALVLYGVIKVFF
WTFSSNGSSNGEPDNKKEK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatatttcaacaatatataaactctcagtgattgcatttgcgctgttggagggt
gtgtgtactagttcaagatgctcggtgctggagtgctggtttgttcaggagaggccgggt
ggtggaggtttctcagcgggaatgagccaggagaaagccgcactttacatcagaaccgac
agcgagaagattgaacagaaatctccatcagacatcgacccttccagaatttactatgtt
tctgatcctgcgtctactttctgcagcgctgccctccatccaccagagggcactgtgaac
aaaccacagtgtgagataaaccctttcaaccctcaagcctccatggtaaaatgggctgct
cctctgaccgcctccgcacaaagccctatctacctgcatgcagactggttttcagtagca
gcacaaggtcttaacaaagagctgacactggcgaacgtgatgcgggcaccgtctgggtcc
aaagagccgagcgtaatcctcagcgtctctagtaaaacatccgccgttcagtccagactg
ggagagccggttctcctcgactgtgggttctgggtcaacccgtcttcacctcttcatgac
tctggttttgctgtggagtggcgctaccagttccggggtgaaggcagactgatcgtggcc
tacgacggaaagaatgatcgcttcgcagagtcctctgagacagatggtgacttggacatc
gtgggactttataagacaggaaacgcatcgctggttctaaaagaggcccaagtgaggcat
gtcgggacatacatctgtaccgtttacttgcctcaccttctggctcaggtagcattagag
ctggaaattgtggagcctccatcgctagcagtctacccctcccctctgccactgtctgtc
ccggggcaggtggtcacggtccactgcgaggcctccggtttctaccccctgtctctggac
ctggactgggagtttactgatgctgagggaaagaagcgatcgctcggtcagggcagcgtg
acaggccacagacaggccagagatgggaccttcagccaaagctctcgcctagagctcgac
tcatataagatggacctcggacggggcggagagctcagctgcgtagccaaacaccaggga
ggaactcgacgtgccatggtggctgtgaatgtcatcggtgtcagtgcgccatccattgag
gactccatggcgatggtcgcagtggctcttgtactttacggtgtaataaaggtctttttc
tggactttcagctctaatggctcaagcaatggagaacccgataataagaaggaaaaataa
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