Clarias gariepinus (North African catfish): 128529370
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Entry
128529370 CDS
T10780
Name
(RefSeq) E3 ubiquitin-protein ligase RNF138-like isoform X1
KO
K10668
E3 ubiquitin-protein ligase RNF138 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128529370
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128529370
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128529370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-Di19
zf-C3HC4
zf_C2HC_14
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-Nse
zf-RING_5
zf-RING_6
zf-RING_4
zf-C3HC4_4
zf-MIZ
U-box
TRAF3_RING
Sina_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128529370
NCBI-ProteinID:
XP_053358855
LinkDB
All DBs
Position
1:complement(12691057..12699413)
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AA seq
278 aa
AA seq
DB search
MWGRPVMETDRIERIDCNCHCTVVEMSRKMGNTSGLGMDLNKASPKADVDSDTEQDYDCP
ICQEVLKMPIRTKNCHHVFCRSCFETAVRSQGPQCPMCRSPVSEKEHQARDIQQRMREKK
GRCRACGQEKILSKMRLHYKTCRKYIEEFGPISAPSVPLPTRTPDVPQNSVFIPNNFIPA
PSNSAARVYTCPYCSLMNLSDMALVHHCLLLHHQEHSRNTIVCPICACMPFGDANYASRN
FLGHLMRRHRFSYTNYVNESEDEDVQLFWALQTSVHLF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtggggacgtccagtaatggagacggacaggatagagagaatagactgtaactgccac
tgtactgtggtggaaatgagcagaaaaatgggaaacacgtcaggattgggcatggatttg
aataaggcttctccaaaagcagatgtagattccgacacggagcaggactacgactgcccc
atctgtcaggaggttctgaaaatgcccatccgcaccaagaactgccaccatgtgttctgt
aggagctgttttgagacagcggtgagaagtcagggccctcagtgccccatgtgccggagc
cccgtgtcggagaaagagcaccaagccagggatatccagcagaggatgcgagagaagaag
ggcagatgcagagcttgtggacaagagaaaattctcagcaagatgaggctccattacaaa
acctgcaggaagtatattgaggaatttggtcctatcagtgcaccctccgtaccgctgcct
acccgaacgcctgacgtcccacaaaacagtgtatttatccccaacaacttcattcctgca
ccctctaacagtgcagcgagggtgtatacttgtccttactgctccctgatgaacctcagt
gacatggccctggtgcaccactgccttcttctccatcaccaagagcacagccgaaacacg
atcgtttgtccaatctgtgcgtgtatgccgtttggagatgccaactacgccagccgcaac
tttcttggccatttgatgcgcagacaccgcttcagctacaccaactacgtgaatgaaagt
gaggatgaagatgtgcagctcttctgggccctgcagacgtcagtccacctgttttaa
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