Clarias gariepinus (North African catfish): 128529399
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Entry
128529399 CDS
T10780
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128529399 (rrp12)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
90S particles
Other 90S particles
128529399 (rrp12)
Pre-60S particles
Other pre-60S particles
128529399 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
128529399
NCBI-ProteinID:
XP_053358857
LinkDB
All DBs
Position
8:complement(18101969..18119240)
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AA seq
1285 aa
AA seq
DB search
MVKSGKLRSGTAQKLKRWKKGHSSDSNPESSRYRQAARSRFFSRPIEKSDLTVDALKLHN
ELQAGSLERKKDGLGDAMDDTAALTERTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHKE
ICAVLAAVTEVIRSQGGKETETEYFAALMTTLEAVESSESLAAVAYLLNLVMKRVPAPVL
IKKFSDVAKAFMDVMSKQATADCVSCIRWILSCLTTLLRKQDLSVWSYPSTLQVYHGLLS
FTVHSKPKVRKAAQQGVCAILRGSDCMFGENAPSHHPAAVTTANYCVKEMEKAGGSKEDT
TTLHVLGLLKELITTFPLSSIKACCETLLRVMTLSHALVTASAMQAFHKLFSVKQKPSNM
TAALNAQIITVLYEYIPSENDLQPLLAWLAVMEKAHIHLSSLQSSLSLGHLPRFFSATMP
CLLSPHTQVVSAAAQTLKTLISECVAPHMAEIGPVLPSVSSGNGLSICKMFRVVEEGLSY
RFHASWPFVLQILGSFYKAAGKQAHPVMMKSLQSLSDLRATPQFPFCGELDLAVGAAVES
MGPQVVLGAVPLLITGTDDDLEFPRSWLIPVIRDNVKNTQLEYFISYFLPLASTLKQRAD
EFEKAGQKLVAKVYQTLQLQIWSMLPGFCTKPTDVVSSFKGIARSLGMAITDRTDLRMCI
YQALRTLIYKSCETEEEKAEVGRFAKNFLPILFNVHTQQPPPRESDPSRLAVLDTIRAYL
TITDPKVVGTFLLKALERLSSPDSTEFSRLTVMDLVVAMSAFVEEEAMAQTYQQIKPYLE
SKDSGIQKKAYRVLEEMCGGEREQCKRFVLANLEQLKVVLLDNLKSASSPAKRPRLKCLS
HIVKQLNEEHKDFITALLPEVIICTKEVSVGARKNAYALLVEIGNAFVRFYGNNKDALNE
CLGHVYVGLTGSVTMITCTVLALTRLVFQFKDCLDVSPLEQLLQNICLLLSSRTREIVKA
SLAFIKVILFILDVKVLASHLTLIMDGISGMKDDMRRHCRTNLKNIFTKLVRKFGFELVK
SMLPAEFHKVLANIRKVEARTKRRKQLNKAEEDGSDSEEDLPKAKTDSIEDVLADSDSDD
SEDEKPKKGQKKPVKQKAQAWLKEGVSDEPLNFLDPKAAQRVLSTNPDLKKSSKREHGFK
MTSDGRLIIKDDDEKDDGSKGDKEMDDILKEAGVKTKKSQKRKIEDDVDDDMEIEPQMKY
KAGGVGIHRPLGGKEESGAGYKAKKGKGDIKKKGKHDPYAYIPLKKAQLNRRKKAKLQGQ
FKGMVRGAQKGALSGKRMQKNKRRT
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatccggcaaacttcggtccggaacagcgcagaagttaaagcgatggaagaaa
ggacacagcagcgattcaaacccagagtcgagccgctatcgacaagctgccagaagccga
tttttcagccggccgatagaaaaaagtgatcttacagttgatgctctgaaattgcataat
gagcttcaggctggttcactggaaagaaagaaggatggtttgggcgatgccatggacgat
acagcagccctgaccgaaagaacatccggcacatttctgagtggcctgtctgattgctct
aatctgacttttagaaaagttcagcgttactgggagtccaactctgctgcacacaaagag
atctgtgctgtactggcagctgttactgaagtaattcgatcacaggggggaaaggagact
gagacagaatactttgctgctttgatgacgactcttgaggcggttgaaagcagtgaatca
ctggctgctgttgcttacctactcaacctagtgatgaaaagggtgcctgctccagtgttg
ataaaaaaattttcagatgtagcaaaggcctttatggatgtcatgtcaaaacaagccact
gccgactgtgtctcctgcattcgatggatcttgtcctgcctgacgactttgctgaggaag
caggatctctctgtgtggagttatccatccacccttcaggtgtatcacggcttgctcagc
ttcactgtgcactcaaaaccaaaggtgcgtaaagcagctcagcagggtgtgtgcgccatc
ctgcgtggtagtgactgcatgtttggagagaacgctcccagccaccatcctgctgctgtt
actacagcaaactactgcgttaaagagatggagaaggcaggaggtagcaaggaagatacg
accacactgcatgtgctggggctcctgaaggagctgattactacatttcccctcagctcg
ataaaggcttgctgtgagactcttcttcgtgttatgaccctgagtcatgcgctagtgacg
gcgagcgccatgcaggctttccacaagctcttcagtgtaaaacaaaagccctccaacatg
actgcagcactcaatgcacagattatcacagttctgtatgagtatatccccagtgagaac
gacttgcagccattgctagcctggcttgctgtcatggagaaagcccacatccatttgtcc
agcttacagagctctttgagtctgggtcaccttcctcggttcttttccgctaccatgccc
tgtctcctttccccgcacactcaggttgtctctgccgccgcacagactctgaagaccctg
atcagtgaatgcgtggcacctcatatggcagagatcggacctgttctacccagtgtatct
tctggtaatgggctttccatctgtaagatgttccgggttgtagaggaaggcttgtcctat
cgcttccatgcttcatggccgtttgtgctgcagatccttggcagcttctacaaagctgca
gggaaacaagctcatcctgttatgatgaagagtctgcagtctctgagtgacctgcgtgcg
acaccgcagttcccgttctgtggagagttggatttggcggtaggtgctgcagtggagagc
atgggcccacaggtcgtcctcggcgctgtcccactcctcattactgggactgatgacgac
ctggagttcccacgcagctggctcattcccgtcatccgagacaatgtaaagaacacccag
ctggaatacttcatctcttacttccttcccctagcatccacactgaaacagagagcggat
gaatttgagaaggcagggcagaagctggttgcaaaagtatatcagacattacagttgcag
atctggtcgatgcttcctggattctgcactaaacccactgatgtggtcagctcatttaag
ggcattgcccgctcattgggtatggccatcactgatcgcactgatcttcgcatgtgcatt
taccaggccctgcgcacactcatctacaagagctgtgagacagaagaggagaaggcagaa
gtgggccgcttcgctaagaactttttgcccattctgtttaacgtgcacacgcagcagccg
ccacccagagaaagtgacccgtccagactggctgtgctcgacaccatcagagcttacctg
accattactgatcccaaggtggtaggcacatttctgctaaaagctctggaaaggctcagc
agccctgacagcacggagttttcacggcttaccgtaatggatttggttgtcgcaatgtct
gcatttgtggaggaagaggctatggcacaaacataccaacaaatcaaaccttacttggag
agtaaggattctggtattcaaaagaaagcgtaccgggtgttggaggagatgtgtggagga
gagagagagcagtgtaagcgttttgttctggccaatctggaacagctcaaggtggtcctt
ctggacaacctgaaaagcgcatcctcacctgccaaaagacccagactgaagtgtctcagt
cacattgtgaagcagctgaacgaagagcacaaggacttcatcactgcacttcttcctgag
gttataatttgcactaaggaagtctctgtcggggcacgcaaaaacgcctacgccttgttg
gtggagatcggcaatgcctttgtccggttctatggaaacaacaaagatgccttgaatgag
tgcttgggtcatgtgtatgttggactcactggatcagtcacaatgataacctgcactgtg
ctggcccttaccagactagtgtttcagttcaaagactgcttagatgtatcaccactggag
cagctcctgcaaaacatctgcttgctgctctccagcaggacacgggagattgtcaaggct
tctttagccttcatcaaagtcatcctcttcatcctggatgtaaaagttctagccagtcat
ctgacccttattatggacggcattagtggtatgaaagacgatatgagaaggcactgtaga
acgaatctgaaaaacattttcactaaattagtccgcaagtttggttttgagctggtgaag
agcatgctgcctgcggagttccataaggtactggccaatatccgtaaagtggaggctaga
acgaagagacgcaaacagctgaacaaggctgaggaagacggttcagacagtgaggaagat
ctacccaaagctaagactgacagtattgaggacgtcctggcagactcggactctgatgac
tcagaggatgagaagcctaagaaaggccagaagaagccagttaaacaaaaagcgcaggcc
tggctgaaagaaggcgtgtctgacgaaccgctcaatttccttgaccctaaagcagcacag
agagttctatccaccaaccctgacttgaaaaaatcttccaagagggagcacggcttcaag
atgacatcagatgggagactgatcattaaagatgacgatgagaaggatgatggatctaaa
ggtgacaaggaaatggatgacatcctgaaagaggctggagtaaaaacaaaaaaaagccag
aagaggaaaatcgaagatgatgtcgatgacgacatggagattgagccgcaaatgaaatat
aaggctggtggcgttgggattcacagaccactgggaggaaaagaggagtcaggtgctgga
tacaaagctaagaaaggaaaaggtgacattaagaaaaaggggaagcacgacccatatgcc
tacatccctcttaagaaggcccagctaaaccgcaggaaaaaggccaaactgcagggccag
tttaagggcatggtcagaggagctcagaagggagcactgtctggaaaaagaatgcagaaa
aataaaaggagaacctga
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