Clarias gariepinus (North African catfish): 128529400
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Entry
128529400 CDS
T10780
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
128529400 (smarca5)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
128529400 (smarca5)
RSF complex
128529400 (smarca5)
WICH complex
128529400 (smarca5)
B-WICH complex
128529400 (smarca5)
NORC complex
128529400 (smarca5)
BRF complex
128529400 (smarca5)
NuRF complex (fruit fly)
128529400 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128529400
NCBI-ProteinID:
XP_053358858
LinkDB
All DBs
Position
8:complement(2021513..2034815)
Genome browser
AA seq
1031 aa
AA seq
DB search
MSEAEGSVEKQREDEAEEVEQPGTAQDGVSSAEEAAQDGGEESSSPQAEKAKTEQSAGYE
EKVKTDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDN
RHRRTEQEEDEELLSESSKAANVCTRFDESPSYVKTGKLRDYQVRGLNWLISLYENGING
ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLI
GDRDERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLS
EIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLV
ERLHTVLRPFLLRRIKADVEKSLLPKKEIKMYIGLSKMQREWYTKILMKDIDILNSAGKM
DKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLATNSGKMAVLDKLLPKLKEQGSR
VLIFSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRA
GGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERA
EMKLRLDSIVIQQGRLVDPNMNKLGKDEMLSIIRHGATHVFASKESEITDEDIDAILERG
EKKTMEMKEKMSTLGESSLRNFTMDTENSVYNFEGEDYREKKKVINNWIEPPKRERKANY
AVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPR
NPDLPNAAQMQREEQAKIDEAEPLNEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGR
DDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALD
SKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQ
FRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPRTSSAQKRKQDGTP
DGRGRKKKLKL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggagggaagcgtggagaaacagcgggaggacgaggctgaagaagttgag
cagcccgggacagcccaggatggtgtttcaagtgctgaagaagcagcgcaggacgggggc
gaggagtcgtcctctcctcaggccgagaaggcgaagacggagcagtcggcgggttacgag
gagaaagtgaaaacagaccggaccaacagattcgagtacctgctgaagcagacggaggtg
ttcgctcacttcattcagccggctgcccagaagactccgacctcgccgctgaagatgaag
cccggccggcctcgcattaaaaaggacgagaaacagaacctgctgtccgccggggataac
cgtcaccgtcgtaccgagcaggaggaggacgaggagctgctgagcgagagcagtaaagcc
gccaacgtgtgcacacgctttgacgagtctccatcctacgtgaaaaccgggaaactccga
gattatcaggtccgtggactgaactggctgatttcactctacgagaacggaatcaacggc
atcctggctgacgaaatgggtcttgggaagactctacagaccatctctctcctgggctac
atgaaacattacaggaacatccccggccctcacatggtcctggttcccaagtcgacactg
tacaactggatgaatgagtttaagcgctgggtgccgtcgctccgagccgtctgtctgata
ggagacagggacgagaggacggctttcattcgtgacacgctgctgccgggagagtgggac
gtgtgcgtcacttcttacgaaatgctcatcatcgagagagccgtctttaagaagtttaac
tggagatacctggtgatcgacgaggctcatcgtatcaaaaacgaaaaatcaaagctgtcg
gaaatcgtgcgagagttcaagaccaccaaccggttgctgctcaccgggacccctcttcag
aacaacctgcacgagctgtgggctctgcttaacttcctcctacccgacgtcttcaactcc
tccgaggactttgattcctggtttgacactaataactgtcttggagaccagaaactggtt
gagcgtttacacactgtattgcgtccttttctgctgagacgtatcaaagcagacgtggag
aaatctttgcttcctaaaaaagaaatcaagatgtacatcgggctgagcaagatgcagaga
gaatggtacaccaaaatcctgatgaaggacatcgatatcctgaactcggcagggaagatg
gacaagatgcgtctgctgaacgtgctgatgcagctcaggaagtgctgtaaccacccgtac
ctgttcgacggcgcagagcccggcccaccttacaccaccgatcttcatctcgccaccaac
agcggcaagatggccgtcctcgacaaactgctgcccaagctgaaggaacaaggttctcgt
gtgctgatcttcagccagatgaccaggatgctggacatcctggaggactactgtatgtgg
cgtaattacggttactgccgcctggatggacagacacctcacgaggagagacagatctcc
atcaacgcctttaacgagcccaacagcagcaagtttctctttatgctgagcaccagagcc
ggtgggctggggattaacctggctacagccgacgtggtcattatttacgactctgactgg
aaccctcaagtggacctgcaggccatggaccgcgctcaccgaatcggtcagaagaagcaa
gtccgcgtgttccgtttcatcacagagaacacggtcgaggagaggatcgtggaacgtgcc
gaaatgaaactgcgtctcgactccatagtcatccaacaaggtagactggtcgatcccaac
atgaacaagctgggcaaagacgagatgttgtccatcattcggcacggtgccactcacgtc
ttcgcctccaaggaaagcgaaatcacagacgaagacatcgacgccatcctggagagaggc
gaaaagaagaccatggagatgaaggagaagatgtctacactgggtgaaagctctctaagg
aattttacgatggacacagaaaacagcgtgtacaacttcgaaggtgaagattatcgagag
aagaaaaaggtcatcaacaactggatcgaaccgccgaaaagagagcgtaaagcaaactac
gctgtcgacgcctatttcagagaagctctgcgtgttagtgagcccaaagcaccaaaggct
cctagacctcccaaacagcccaacgttcaagacttccagttctttccacctcggcttttt
gagctgcttgagaaggagatcttgtactacaggaaaactataggctacaaggtgccaaga
aatcctgacctgcccaatgctgctcaaatgcagagggaggagcaggctaagattgatgaa
gcagaacctcttaatgaagaagagctggaggagaaggagaacctcctgtcacagggcttc
actatttggaacaagcgagatttcaaccagttcattaaggctaatgagaaatggggacga
gacgatatcgagaacatcgctcgtgaagtggaaggcaaaacacccgaagaagtcatggag
tattccgctgtgttttgggagcgctgcaatgagctgcaggatatcgagaagattatggca
cagatcgagagaggtgaagccaggattcagaggaggatcagcatcaagaaagcgctagac
tcaaaaatcggccgttacaaggcaccgttccaccagctgaggatttcttacgggaccaac
aaagggaagaactacaccgaggaggaggaccgattcctcatctgcatgcttcacaagctg
ggcttcgacaaggaaagcgtctacgacgagctccgccagtgcattcgcaactcgccccag
ttccgcttcgactggttcctgaagtctcgcacagccatggagttacagaggagatgtaat
acactgatcactctaatcgagcgcgagaacatggaactggaagagcgggagaaggcggag
aagaagaaacgcggacctcgcacatcttcggcacagaagcgtaagcaggatgggacccca
gacggccgcggtcgcaagaagaagctgaagttgtaa
DBGET
integrated database retrieval system
