Clarias gariepinus (North African catfish): 128529441
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Entry
128529441 CDS
T10780
Symbol
pax2a
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128529441 (pax2a)
04131 Membrane trafficking [BR:
cgar04131
]
128529441 (pax2a)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128529441 (pax2a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128529441 (pax2a)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
128529441 (pax2a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128529441 (pax2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
Homeodomain
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
128529441
NCBI-ProteinID:
XP_053358913
LinkDB
All DBs
Position
8:17192716..17221310
Genome browser
AA seq
414 aa
AA seq
DB search
MQRVFYMYVMLRCCVCAVVSHIGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCD
ISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWE
IRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGTGTSLTTAGHTIVPSTASPP
VSSASNDPVGSYSINGILGIPRSNGEKRKRDDVLWSGNHLDGRKIGYYGSDGSGPNSDSQ
GSVESLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPALNPGLD
EVKPSLSTSASSELGSSVSQSYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVP
GSDFSGNPYSHPQYTTYNEAWRFSNPALLSSPYYYSAASRGSAPPTAATAYDRH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtgtcttctatatgtatgtaatgttacgctgttgtgtatgtgctgttgtctcc
cacatagggcatgggggtgtgaaccagctcggaggggtgtttgtgaacggcagaccccta
cctgacgtggttcggcagaggatcgtggagctggcacaccaaggggtcagaccgtgtgac
atctccaggcagctccgggtcagccatggctgtgtcagcaaaattctcggcagatactac
gaaactggcagtattaaacctggagttattggcggttccaaaccaaaagttgccactccg
aaagtagtggataaaattgcagaatataagcggcagaaccccaccatgttcgcctgggag
atcagagaccgacttctcgccgaaggcgtgtgtgacaacgacacggttccgagcgtatcc
tcaatcaacaggataatacggactaaagttcagcagccctttcatccatctccagacggg
acaggaacttccctcaccacagcaggacatactatagtgcctagcacagcctccccacct
gtatcaagtgcttcgaatgacccggtgggctcttactccattaacggcatccttggaatc
cctcgctctaacggcgaaaagagaaaacgcgatgatgttctctggagtggcaaccacttg
gatgggaggaaaataggatattatggctcagatggctctggcccaaacagtgattctcag
ggtagtgtggagagtttacgaaagcacctgagggctgatgcctttactcaacagcagctg
gaggctctggaccgggtgtttgagcggccatcgtaccctgacgtcttcccaacatcagag
cacatcaagccagagcaggctaatgaatactcactaccagcactgaacccgggactggat
gaggtcaagcccagcctatccaccagcgccagctccgaactgggctccagcgtttcccag
agctacccagtagtgacaggtcgagacatggccagcacaactctcccaggttacccccct
cacgtcccccccactgggcaaggcagctaccccacctcaacacttgctggaatggttcct
ggaagtgatttttcaggaaacccctactcccatccacaatacacaacctacaatgaagct
tggagattcagcaaccctgcactattaagttccccttattattatagtgccgcgtcccgg
ggctcggcccctcccactgctgccactgcctatgaccgccactag
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