Clarias gariepinus (North African catfish): 128529494
Help
Entry
128529494 CDS
T10780
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128529494 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128529494 (psip1a)
Spliceosome [BR:
cgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
128529494 (psip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
128529494
NCBI-ProteinID:
XP_053359007
LinkDB
All DBs
Position
8:complement(6742913..6755638)
Genome browser
AA seq
511 aa
AA seq
DB search
MARDYKAGDLIFAKMKGYPHWPARIDDVPDGAVKPPNAKFPIFFFGTHETAFLGPKDIFP
YLPNKDKYGKPNKRKGFNEGLWEIENNPTVELNGEKVMAMEAVSDKESDGSPDDEREGSE
KSQEKKRKSSKVAGEEEEEVEEEEEVEEEEEEEGDGMEMSLVEEDSPLKDSADPAKAKRV
WKKKLHAEAEQDSGEEGGPASHTSSPVAVEAPAPKRRGRKPNAEKLMLLQQQASHGDAGG
DVEKKRKRTVEDKSRSSDGEKDQTSEGKKKKEKDESKGGKKEPEAKKKRSAKEESSSESD
EDAKRNRKRMKQTTETEKDGRRKPDEINELGKEEGKKEERKGEKKKEVSTESRLHRLHGE
IKISLKINNPDVKKCLVALDELSSLQLTTQHLQKHRELIATLKKIRRFKASQDVMDKATM
LYHKFKTMFLVGEGETLISQVINKSLAEQRQFEDAKKGALKRVEQSKEPGTDNRAVNGDS
SPEDKTTETEMERTEEPAEQNSVMNPAEESV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagattataaagctggagacctgatcttcgctaagatgaagggttatcctcac
tggcctgcgcggattgatgatgttccggacggagcggtgaagcctcctaatgctaaattc
cccatctttttcttcgggactcatgaaacggcgttcctcggtcctaaagatattttccca
tatttaccaaacaaagataaatacggaaaacccaacaagaggaaaggatttaatgaggga
ttgtgggaaatcgagaacaaccctacagtggagctgaacggagagaaggtgatggcgatg
gaagctgtttcggataaagagtcggacggcagccccgatgatgaacgagaggggagcgaa
aaaagtcaggagaagaagaggaagtccagtaaagtggctggagaggaggaggaggaggtg
gaggaggaggaggaggtggaggaggaggaggaggaggaaggtgatggcatggagatgtct
ctagtggaggaagactcaccactaaaagactcggcagatcctgcgaaagctaagagagtc
tggaagaagaagttgcacgctgaagccgagcaggactcgggggaagaaggcggacccgct
agccacacctccagccccgtggctgtagaggcaccagctcccaaacggagaggcagaaaa
cccaacgcggaaaaacttatgctgctgcagcaacaggcctcacatggagatgctggtgga
gacgtagagaagaagcgcaagagaacagtggaggataagagcaggtcctcggatggagag
aaggatcaaacctcagaggggaaaaagaaaaaagaaaaagatgaaagtaaaggagggaag
aaggagccagaagccaagaagaagcgcagtgccaaggaggaaagctcatcggagtctgac
gaggatgcgaagcgaaaccgtaaacgaatgaagcaaacaacagagacagaaaaagacgga
cgacgtaaaccagatgaaataaacgagttgggaaaagaggaagggaaaaaagaggaaaga
aaaggagagaagaaaaaggaagtgtcgacagagtcacgactgcataggctacacggcgag
attaaaatctcactgaaaatcaacaacccggatgtgaagaagtgtctggtggctctggac
gagctgagctcactacagctcaccactcagcacctccagaaacacagggagctcatcgcc
acactcaagaagatccgcaggttcaaggcgagtcaggacgtgatggacaaagccaccatg
ctatatcataaatttaagaccatgttcctggtgggagagggagagacgctgatcagtcag
gtcatcaacaagtctctggctgagcagcggcagttcgaggacgccaagaagggggcgctg
aaaagagtcgagcaaagcaaggaacccggcacagataacagagctgtgaatggagactct
agtcccgaagataagaccactgagacggagatggaaaggactgaggaaccagcagaacag
aacagtgtgatgaatccagcagaagaatctgtctaa
DBGET
integrated database retrieval system
