Clarias gariepinus (North African catfish): 128529649
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Entry
128529649 CDS
T10780
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128529649 (nphp4)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
128529649 (nphp4)
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GFIT
Other DBs
NCBI-GeneID:
128529649
NCBI-ProteinID:
XP_053359084
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Position
9:complement(10728879..10937177)
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AA seq
1415 aa
AA seq
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MEGDRTRAGRMSAWKRICEENRVIPPPNQTARLAQGTSQAFQLVFKRLDGLHLNQAEEAR
SLRYELRVSLFDQSHHRFFGRTWKSEPHQATKRNQEQPSKVHFNEVVYFHTSLCLASVVA
VVELASLPSGTETSHNAVGQGFGILQLFSEQAQGEGRLTLFYGTPRALLHPTLRDPLQIN
TVLSAIEGTQLLYSLQPHSALNPIMHLLPPNIMVSGNELIPGVLPPTDSTEDALRKPRLL
PTFSCVLEKMRVSLSPSIQAFEADMLERLNSDRNMTICMEVQSLVIQERRLHIGVHNGLG
WVDGPQVMVLEPRAGGSSDLKESSTDTHSSLLMPRGNVELRMISHPAFSLLFQLEYVFSV
PLVGDGKMPSMVVQRAVFMQCVRWGVWSPFSDPDGPCESVCVRLLGGALPNPYGVMVYTA
HTQQTDAERSSIKFKFMSHIEGTASNVTSKSISQDKPQSKKWHVTSQDESKLALEASPLH
STRGPELSLSQLAVPSHYPSLSHTAGSPWQQQLPAPLALSPMASAHQLSHVVFPVVGIAH
LEVSAMEKEGMRDAPEEECDLQELTFTPVHAPVITLGTHTTGTNRTSSRGFFAHLFSSRF
PEIRDDLNQVAEFLDPDEPVNFDPYREEADPLQANTLLLQFLAFSRVHQAGVNMEWPRTV
HFTFQLYRFPPVTTQRLKLVASDASSRPDHPCIFYVINKDGSVGSGPPGLQLQYRVDPAL
LKPGERIWFLRYLALHTLHIDVWDSDSLLLIGSAAVQLKHLLRQGRAAVQVIHELEVIST
EYLQDANLARVHAGGQRVMPAMSVYTVVKGRLHIRLGNIGGVVQKNLNSSVLLPPSRSRV
IQPSQTPTGFQGGSLFSNVSVLNHNARNVRRAQRLPDIDGELAGLLHSRIREVDVSRLQS
RSETEEVRQRKIERMAAVRQHEENSIPNTHEKANYMRRKEDRTQHSQDLRLIEAYRERCK
VEGIMNMLSQTITTSHTIYATLGTAEFFEFVLKNPFNIPQTVTIECEDPEISVIVNAEEW
RYFKDLTKTCTPLEVEMFHMKEDGLTPQVYLRPRESVHIPLKYQSFVSGHVLLSQDSKTS
TSPHFAHHQQSNTVMAKSIKVFFRTADSQPLAICQVRVEPTPHIVDQTFRFYQPELSFFK
KAIRLPPAEPGAPDVCSRLQVRCSDPNVICHVIGTAPGEPQDIYLKVPGAPSPQIKTFVI
TVFNDPWLASPTQTWQVYMHYLQKMDISCVCGTLSWHSLVLRGTQSIRKVKCYTSHPLEL
QVDPEDVFALPALGVQDIRLGVKSLHSGSCFRYLNVVDVDTRQLVASWLLCLTCRQPVIS
RAFEIQVLVGGGRGNNKKITFTNPYSSSRGFRLCSDHPDLLQFKEETFQIEGGASYNIGL
RFAPSQSAGTEEILVFINDLEDKNEETYCIKVVYR
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacaggacgcgtgctgggagaatgtcggcgtggaaacgcatttgcgaagaa
aaccgagtgattcctcctcctaaccaaacagcccggttagcacagggcacgagccaggct
ttccaactcgtgttcaaacgactggatgggcttcatttaaaccaggctgaggaggcgaga
tcactcaggtacgagctgcgcgtcagcctgtttgaccaaagtcaccatcgcttttttgga
aggacatggaaaagtgaaccacatcaagccactaagcgaaatcaggaacaacccagcaaa
gtgcattttaatgaggttgtatacttccacacatctttgtgtttggcctcagtggtggct
gtagtggagctagcctctctcccttctgggacagaaacttcccataatgcagtgggccag
ggttttgggatcctacagctcttctctgaacaagcacaaggagagggcaggttaactctg
ttttatggtactcctcgagctctgctacacccaacactgagggacccgttgcagataaat
acagtgttgtcagcaatagagggaactcagctgctgtattctctccagccacactccgcc
ctcaatcccatcatgcacctactcccacccaatatcatggtatctggcaatgaactcatc
cctggtgtccttcctcctacagacagcacagaagatgctttgcggaaaccaaggctgcta
cctactttctcttgtgtgctggagaagatgcgtgtgtccctcagtccctccatacaggca
tttgaggcagacatgctagagaggctgaacagtgatcgcaacatgacaatttgcatggag
gtacagtcgttggtcatacaggagcgaaggctgcatattggtgttcataatggtctgggc
tgggtggatggacctcaggtgatggtgctggagcccagagctggtggaagcagtgacctt
aaagaaagttctacagacacacacagctctctcctgatgccacgtggtaacgtggagctg
agaatgataagccacccagccttcagcttgctcttccagctggagtatgtcttctctgtt
ccccttgtcggagatggaaagatgccgtccatggtcgtgcagagggcagtgttcatgcag
tgtgtgcgttggggggtatggagtcctttctccgatcctgatggcccatgtgaaagtgtg
tgtgttagactgctgggtggtgccctacccaacccttatggagttatggtttatacagca
cacacacagcagactgatgcagagagaagcagtatcaaattcaagtttatgagccacata
gaaggcacagcttccaatgtgacatcaaaatcaatctctcaagacaagcctcagtctaag
aaatggcatgtcacctcccaagatgaaagcaagctcgcacttgaagcttcaccactgcac
agcacccgtggtcccgaactctcgctttctcagctggctgtgccatcgcactatccaagt
ctgagccacacggcagggtcgccatggcaacagcagcttcccgctccactcgctctctcc
ccgatggcgtcggcccaccagctgtcacacgtcgtatttccggttgtaggtatagcacac
ctagaagttagtgcaatggagaaagagggcatgagggatgccccagaggaagagtgtgat
ctacaagaactgaccttcacccctgtccatgctcctgtcatcacgcttggaacgcacaca
actggcaccaacaggacgagttctcgaggtttcttcgctcatctcttctcctcccgcttt
cctgaaatccgtgatgacctcaaccaagtggctgagtttctagaccctgatgagcctgtg
aactttgacccctatagagaagaggcagatccattgcaggctaacacactccttctgcag
ttcttggcttttagcagggttcatcaggcaggtgtgaacatggaatggccaagaacggtg
cattttacctttcagctttatcgctttcctcctgtcaccacacagcggcttaagcttgtg
gcatctgatgccagttcaaggcctgaccatccctgcattttttatgttataaacaaggat
ggcagcgttggatcaggtccacctgggctgcagttgcagtatcgcgtggatcctgccctg
ctaaagcctggggagcgtatatggttcctccgctacctggctctgcacacactgcacata
gacgtgtgggacagcgactcgctgctgctcatcggctctgctgctgttcagctgaagcat
ctgttgcgtcagggccgagctgctgtgcaagtgattcatgagctggaggtcattagcact
gagtacctgcaggatgccaatttggcaagagtgcatgcaggtgggcagagagtcatgcct
gccatgagcgtctacaccgttgtcaaaggcaggctgcatatccgactcggcaacatcggt
ggtgtggtgcagaaaaacctgaactcgtctgtccttctccccccatcgcgctctcgtgtc
attcagcccagccagactcccacaggctttcaaggaggcagtctgttctcaaacgtcagc
gtcctcaaccacaacgcacggaacgtgaggcgggcccagcgtttgccagatattgatggt
gagttggctggtctcctgcacagtcggattagagaagtagatgtctccaggctgcagagt
cgaagtgaaacagaggaagtacgtcagagaaaaattgagaggatggcagctgtccgtcaa
catgaagaaaactccatacccaacacacacgagaaagcaaactatatgaggagaaaggaa
gatcggacacagcactctcaggacctacgcttaatagaggcctatcgagagcgctgcaaa
gtggagggcatcatgaacatgctgagccaaaccatcacaacctcgcacacaatctatgct
accctcggtaccgccgagttttttgaatttgtgctgaagaaccccttcaacattccacag
acggttactattgagtgtgaagaccctgagattagtgttatagtgaatgctgaggaatgg
aggtattttaaagacttgacaaagacatgcactccgttggaagtggagatgttccacatg
aaggaggatggcttgacaccccaggtttacttgcggcccagagagagcgtccacatccct
ctgaagtaccaaagctttgtctctgggcatgttctgctttcacaggactcgaagacttct
accagtccacattttgctcaccaccagcagtctaacacagtgatggctaaatctatcaag
gtgttcttccgaacggcggacagtcagccgctggccatctgccaagtgagagtggagccg
actccccacatcgtcgaccagacctttcgcttctatcagcctgagctctccttctttaag
aaagccatccggctgcctcctgctgaacccggcgcaccagatgtttgttccaggctccag
gtgcgctgcagcgaccccaatgtgatctgccacgtcattggcacggctccgggggaacct
caggacatttatctgaaagtgccaggggcgcccagtccacaaattaagacatttgtcatc
actgtgttcaatgatccctggctggcctctcccactcaaacgtggcaggtgtacatgcat
tacctgcagaaaatggatattagctgtgtgtgtggtacgctcagctggcactccctggta
ctgcgtggtacacagagcatccgcaaggtcaagtgctacacatcccaccctctggagtta
caggtggacccagaggatgtgtttgcccttcctgctcttggtgtgcaggacattaggctg
ggagtgaagtctctgcattctggaagctgtttccgttaccttaatgtggttgatgtggac
acgaggcagctggtggcatcctggcttctgtgcctcacctgcaggcagcctgttatatca
cgggcctttgagatccaagtgcttgtaggaggtgggagaggtaacaataagaagatcaca
ttcaccaatccctattcttccagcagaggattcagactgtgctcggaccatcctgacctg
ctgcagttcaaagaggaaacatttcagattgagggaggtgcgagctacaacatcgggctg
cgtttcgctccaagtcagagtgcaggtacagaggagatcctcgtcttcatcaatgatctg
gaggataagaacgaggagacatactgcatcaaagttgtctacagataa
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