Clarias gariepinus (North African catfish): 128529654
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Entry
128529654 CDS
T10780
Symbol
chpf2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cgar01100
Metabolic pathways
Module
cgar_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128529654 (chpf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128529654 (chpf2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
128529654 (chpf2)
Glycosyltransferases [BR:
cgar01003
]
Glycan extension
O-Glycan
128529654 (chpf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
128529654
NCBI-ProteinID:
XP_053359094
LinkDB
All DBs
Position
1:complement(37638148..37648059)
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AA seq
763 aa
AA seq
DB search
MRLSPFLAVFRPAMPLILGLSLGCTLSLLMVSWTQGDTDDVCSDQLRLGLLPGDRAGDPQ
RVEAGDRNEDFQPRIVPYHKDPSKPHKKVLRTRYIHTELGIRERLLVGILTSRATLNTLA
VAVNRTLAHHFHRTFFFTGLRSAKLPHGMAVVAHGDDRPVWLMYETIRHLHQHHGNEYDW
FYLAQDDTYTQAERIMNLVGHLSAGQDLYMGRAEEFIGGEERARYCHGGYGYLLSRSLLA
RLQPHLDACRNDILSVRPDEWLGRCIIDYLGLSCMEKYQEMTYYYFELQKNADPEREDSV
QFKNAFTVHPVSEPALMYRLHKRYSQIELDWTYAQIHQLQVQINNLSELTPEGKAGATWP
VGVNPPFRPKTRFEVINWEYFTEEHIYSCADSSPKCELRGADRADVNSILETAVERLNER
YQPQLRFRKQRLLNGYRRFDPTRGMEYILDLALQAFTQKGHSQVIAKRVGLLRPLSAIEI
IPMPYVTEATRVQVILPVTARDQDFVGNFLDTYVMNTLDTRDNALLTFLFVYDPYDAQRV
SQTDVFASVKSMISEVEKRYSDVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLASVW
TEVTGDFLNRCRMNAISNWQVFFPVHFQEYSPALVYRDQQPSAASSFSSEALRDGRFDRH
AFEEACFYNADYMATRTKMANDIMDNDELLESMDVYEIFVRYSNLHVFRAVEPALIQKYV
RRTCNPRFSEDIYHRCVLSNLEGLASRSHLAMALFEQEQANST
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtcccctttccttgccgtcttccgacccgccatgcccctcatcctgggcttg
tctttgggctgcactctcagcctgctcatggtgtcctggacgcagggggacacggacgac
gtctgtagtgatcagctgcgtcttggactccttccgggcgatcgtgccggagatccccag
agagtggaggcaggtgacaggaacgaggatttccaacctcgcatcgtaccgtatcataag
gacccgagcaagccacacaagaaagtgctcaggacccgttacatccacacagaacttggc
attcgtgagcgcctcctggtgggcatcctgacctcgcgtgccacactcaatacactggct
gtggcggtgaaccgtaccttggctcatcacttccaccgcacctttttcttcaccggcctt
cgtagcgccaagctgccccatggcatggccgtggtcgctcacggagatgaccgacccgtc
tggctgatgtatgaaaccatccgccacttgcatcagcaccatggcaacgaatatgactgg
ttctatctggcccaggacgacacgtacacgcaggcggagcgcatcatgaacctagtggga
catttgagtgcgggacaggatctctacatgggccgcgcggaagagtttatcggcggcgaa
gagcgggcgcggtactgccacggcggctacggctacctgctgtcacggagtttgctggct
cggctacagccgcacctcgacgcctgccgcaacgacatcctcagcgtgaggccggacgag
tggctgggtcgctgcatcatcgactacctgggactgagctgcatggaaaagtaccaggaa
atgacctactattactttgagctgcagaaaaatgcagaccccgagcgcgaggacagcgtc
cagttcaagaacgccttcaccgtgcaccccgtctcagagccggcgctcatgtatcgctta
cataaacgctacagccagatcgaactggactggacctacgcccaaatacatcagcttcag
gtacaaattaacaatctgagtgagctcactccagaaggcaaagcaggagccacatggcct
gttggggtcaacccacctttccgtcccaagacgagatttgaagtaatcaactgggagtat
ttcacggaggagcacatctactcgtgcgcggacagctccccgaagtgtgaactccgggga
gcggaccgtgcagacgtcaactccattttggagactgctgtggaacgtttaaacgagcga
tatcaaccacagctgcgtttccggaagcagcgtttgttaaacggctaccgccgcttcgac
cccactcgcggtatggagtatatactggacctggccctacaggccttcacacagaaagga
cacagtcaggtgattgccaagcgtgttggcctgctgaggcctctcagtgccatagagatc
attccaatgccgtatgtgactgaagcaacaagagtgcaggtcatccttcctgtgacagca
cgagatcaggactttgtgggcaattttttggacacgtatgtgatgaacactttggacacg
cgggacaatgccctactaaccttcctctttgtgtatgacccctatgacgcacaaagggtc
agccagaccgatgtctttgccagcgtgaaatcaatgatcagcgaagtggagaagcgatat
agtgatgtgaagatcccgtggatcagcgtcaaaacagaggttccctcccaggtgaagctg
atggacatcatctccaagaagcatccagtggacacactgttcttcctagccagcgtctgg
accgaggtcactggggacttcctgaaccgttgccgaatgaacgccatcagcaactggcag
gtcttcttccctgttcacttccaagagtacagcccagccttggtgtaccgagaccagcaa
ccttctgcagcctcgtcgttttcttcagaggcgctccgagacggccgcttcgaccgccac
gccttcgaggaggcctgtttttacaatgcagattacatggccactcgtaccaagatggcc
aacgacataatggacaacgatgagctgctggagagcatggacgtttacgagatttttgtg
cgctactcaaacttgcatgtctttcgggcagtggagccagcactgatccagaaatacgta
cggcgaacctgtaacccccggttcagcgaagacatctaccatcgctgtgtgttgagcaac
ttagagggactggcctcacgatcccacttagccatggctctgtttgaacaagagcaggca
aacagcacctag
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