Clarias gariepinus (North African catfish): 128529712
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Entry
128529712 CDS
T10780
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128529712 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Ank_2
EGF_CA
EGF_2
Ank
Notch
NOD
Ank_5
NODP
Ank_3
Ank_4
EGF_3
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
128529712
NCBI-ProteinID:
XP_053359164
LinkDB
All DBs
Position
9:3125525..3185241
Genome browser
AA seq
2506 aa
AA seq
DB search
MGRFPGVFSGNVILIIVSWTHLSHALQCVDHVNPCVNNASCITYANGTGYCRCPPGYLGE
YCHHKDPCQPRYCLNGGSCVSSGPPSAPSCLCPLGYSGPLCEKQDNSSCYPNNPCRHGGT
CSLLHNDQYTCQCASKWTGTQCEQEDSCTSSSCFNGGACTSLPNKTFSCTCPPGYDGSRC
QNDVDECAREPALCLNGGTCINVPGLYRCNCPPRYTGPKCETSYVPCSPSPCMNGGTCRQ
TSDTSYSCHCLPGFSGTNCEMNIDDCPDHQCQNGGTCMDGVNTYNCQCPPEWTGQFCTDD
VDECRLQPNTCQNGGTCSNTPGGYTCVCVNGWSGPDCSENIDDCAARPCSAGSTCIDRVA
SFFCSCPFGKTGLLCHIDDACISNPCREGSQCDTNPVNGKFNCNCPFGYKGNTCNDDVNE
CTIGPNPCEHGGTCENTAGSFTCNCARGYSGPRCEQDVNECGSNPCLNDATCLDQIGDYT
CICMPGFVGVHCEIEVDECASSPCLNNGKCQDQISRFVCECPPGFTGDTCQIDTDECAST
PCQNGAKCIDQPNGYECECAEGFTGRLCSENIDDCNPKPCHHGVCKDGIAMFTCECELGW
MGQICNQQFNECTSDPCQNGGRCLDRVNNYQCICQPGTSGVNCENNYNDCISNPCQHGVC
EDGINKYKCVCDPGYTGERCSKEIDECSSNPCLSGGTCVDKVNGFECQCPAGTHGLLCHS
GADHCAPQPCHHGRCEEVQNGYRCVCVPGYEGQNCDQEKNECESSPCQNGGRCKNAVNSY
TCSCLLGYTGVNCEININECQSNPCENKGNCIDGVNSYTCNCPLPYTGRHCEEELMPCAS
QPCQRGGVCRPSPDYTSFTCKCPTGWKGAQCTEDVDECKKKPCLNGARCHNTQGSYLCSC
QPGYSGVNCQTNIDDCSSNPCINGGSCVDKVGRFSCECRPGFYGERCEEEVNECESSPCR
HEGTCTDFVNSYTCQCQPGYDGINCERNIPECTETSCLNNGTCVDGINRFSCRCHPGFTG
SFCQYEINECESQPCKNGGTCVDGLGTFRCICPMEYTGRFCQSMENLCKNIQCKNGGECV
QQETTWRCRCPQDWSGLYCDIPNLSCQNAAEKKGVLVERLCMNGGVCVNKDNTHSCSCQV
GWTGSYCEIGIDECLSNPCRNGGTCVDYQAEYDCQCKPGYQGVNCEYDVNECLSNPCRNG
GSCINLENQFYCACPPGTKGVRCEVDVDECSTEYGSPCLNGGRCMDGIGHYKCTCPPGFT
GDHCEGDINECSSSPCNKLGSIDCVQLANDYQCRCRLGYTGRHCESMVDLCQSKPCHNGG
KCYMNTSSVHGYTCTCPPGHTGSNCGDIEIYTCANLRCQNGGWCRLSSLRQPECVCPSGF
SGALCENQNPPCSCQNGGVCVKGPHKSNSFFCHCLAGYSGEHCQIRDRTASCPYVECRER
RGDRVCDPQCKNAECDWDGGDCTLHRLRPWENCTASVPCWEYFRNGRCDPECNNAVCLFD
SFECPKTSPSTPSVCKYDLYCRDHYQNGYCNEGCNNEACGWDGLDCSTDKPAQLADGTLI
IVVLLQPTELLGDINGFLRSLGMLLHTNLRVKHDDQQQPMVYPYYGPDHNNAHVDSAGAK
RIGKRELKNEVIGSKVYLEIDNRQCAETTPSECFASTDQAASYIAAESLKDELHYPIVSV
DSLPSYPPDKNPLLYLVAVAGGIILLILILGVLIAKRKRKHGILWMPDGFLAKKDSKRRE
PVGQDDFGMKNLQKSQVEGLIDGSAGHHWPEEEHRPKKPRLEDKPLLGVDAGVDRREWTL
QHHKAADITLTPPQADIDMDCLDVNVKGPDGFTPLMLASLRGGSSPECVSVLAEEEEESG
VDEPGTNMISDLISQGATLNAQTERTGETALHLAARYARADAAKRLLDAGADPNAHDNLG
RTPLHAAIAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEELVHCHADV
NAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQNNKEETPLFLAAREGSFEAAQVLL
DHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHSGPNHVGNGGGGHPSMVC
PGNGVMGMRPGQQNKKNRRSGGGAAKVGGPNGPGGGVKDLKEMKTKRRKKPTGGEATGLA
ATSSGTMVTSTVTANTNGTKGTAGTPGTGVPESSVTMSPVDSLESPHSYTTDVAGAATMA
KSPPLMTTASTRPLLPPVSHMLGQQQSWVGVTKHGYPSPHVFGHMVSHQMPQAHSGLPQH
HPGQGILSPVNVSREQLPSIVTFQMMASRNQALLKPNQQGAMQMSQTQPQGLNHMHCSPE
MMYPMQDARLQHGIPHLHSHAHNMAEPQVRQVTPYHQQLQSPVDKYPTPPSHRSYTSGAG
SEVVTTPGQGSEVTTPGHGAPPSSEHPYLTPSPESPDPWSSSSSPHSHSDWSDVTTSPHG
ALHTHAHPHTHAHTHVPEQASLLQPQPSQPAQPPQQQQQPCSSVYA
NT seq
7521 nt
NT seq
+upstream
nt +downstream
nt
atgggccgatttcccggtgtcttctcgggcaacgtcattctaatcatcgtttcctggact
catctttcacacgctctgcagtgcgtggaccatgtgaatccgtgtgtgaacaatgcgagc
tgcatcacctacgccaacggaacggggtactgcaggtgtcctccaggttacctgggtgag
tactgccatcataaggatccgtgtcagccgaggtactgtttgaacggtgggagctgtgtg
agcagtgggccgcccagtgccccttcgtgtttgtgtcctctggggtacagcggccctctg
tgtgaaaaacaggacaactcgtcatgttaccccaacaacccctgccgccatgggggaacc
tgctcgctcctgcacaatgaccagtacacctgccagtgtgcttctaaatggacaggtaca
cagtgtgagcaagaggacagctgcacctcctcttcgtgtttcaacggaggagcctgtacg
tctcttcccaataagactttctcctgcacgtgtcctccgggctacgacgggtcgcgctgc
cagaacgatgtggacgagtgcgcgagggagccggctctgtgccttaacggaggaacgtgc
attaacgttccaggcttgtaccggtgtaactgccccccgaggtatacggggcccaagtgc
gaaacgtcatacgtcccctgttctccatcaccatgcatgaacggcggaacctgcagacag
acgtctgacaccagctactcgtgccactgtcttccaggttttagcggcacaaactgtgag
atgaacatcgacgactgtccggatcatcagtgccagaacggaggaacctgcatggacggt
gtcaacacctacaactgccagtgtcctcccgagtggactggtcagttttgcacagacgac
gtggacgagtgtcgcctgcagcccaacacctgtcagaacggaggcacgtgcagcaacacg
cccggcggctacacctgcgtgtgcgtgaatggctggagcggcccagactgctctgagaac
attgatgactgcgccgctagaccctgctcggctgggtccacctgcatcgaccgcgtagcg
tccttcttctgcagctgccccttcggcaaaaccggtttgttgtgtcacattgatgatgcc
tgcataagtaacccgtgcagggagggctcccagtgcgacaccaatcccgtaaatggcaaa
ttcaactgcaactgcccttttggatacaagggcaacacatgcaatgacgatgtcaacgag
tgcaccattgggccaaacccgtgcgaacacggtggcacgtgcgagaatacggcaggctcg
ttcacttgtaactgcgcacgtggatattcgggtccccggtgcgagcaggacgtcaacgag
tgcggctcgaacccctgtctgaacgacgccacgtgtctggaccagatcggtgattacacc
tgcatctgcatgccaggttttgtgggtgtccactgtgaaattgaagtggacgagtgcgcc
agttcaccctgcctcaacaacggaaagtgtcaagatcagatcagccgcttcgtctgcgag
tgtcctccaggtttcacaggagatacgtgccagattgacactgacgagtgtgcgagcacg
ccatgccaaaatggagccaaatgcatcgatcagcccaatggctacgagtgcgagtgtgct
gaaggtttcactggacgcctgtgttcggagaacatcgacgactgtaacccaaagccgtgt
caccacggcgtgtgtaaggacggcatcgctatgttcacctgtgagtgtgagctggggtgg
atggggcagatctgcaaccagcaatttaacgagtgtacaagtgacccgtgccagaatgga
gggcgctgccttgaccgcgtcaacaattaccagtgcatctgtcagcccggaacctccggt
gtgaactgtgagaacaactataacgactgcatcagtaacccgtgtcagcacggtgtgtgt
gaggacggaattaacaagtacaagtgtgtgtgcgatcctggatatacaggtgagcggtgc
agcaaggagatagacgagtgcagttcgaacccgtgtctcagcggagggacgtgtgtggat
aaagtcaacgggttcgagtgtcagtgtccagctgggactcacggcctgctgtgtcactcc
ggggccgatcactgcgcccctcaaccctgtcaccacgggagatgcgaggaggtccagaac
gggtaccgttgtgtgtgtgtgcctgggtatgagggtcagaactgcgatcaggagaagaac
gagtgcgagtccagcccctgtcagaacggaggacgctgtaaaaacgctgtgaacagctac
acatgcagttgtctgctgggatacactggtgtgaattgtgagataaacattaacgagtgt
cagtcgaacccctgtgagaacaagggcaactgcatcgatggagttaacagctacacctgt
aactgccctctgccgtacacagggagacactgcgaggaggaattaatgccgtgtgcgtct
cagccatgtcagagaggaggtgtgtgtcggccctcaccggattacacctcctttacctgc
aagtgtcctactgggtggaaaggagcccagtgtacggaggacgtggatgagtgtaagaag
aagccgtgtttgaacggcgctcgctgtcataacactcagggcagctacttgtgtagttgc
cagcccgggtacagcggcgttaactgtcagaccaacatcgatgactgcagctccaacccc
tgtatcaacggaggctcatgcgtggacaaagtgggccgcttctcgtgtgagtgcaggccc
ggtttctacggcgagcgatgtgaggaggaggtgaatgagtgcgagagctccccttgcagg
cacgaaggaacttgcacagactttgtcaacagctacacgtgccagtgtcaacctggttac
gacggcatcaactgcgaacgcaacatccccgaatgcaccgagacctcctgtctgaataat
ggcacgtgcgtggacggcataaaccgcttctcctgtcggtgtcatcctggattcaccggc
tcgttctgccagtacgagattaacgagtgtgagtcgcagccgtgtaaaaacggaggcacc
tgcgtagacggcctcggaacgttccgctgcatctgtcctatggagtacacgggacgattc
tgccagtcaatggagaatctatgcaagaacatccagtgtaagaacggtggcgagtgtgtc
cagcaggagacgacatggcgctgtcggtgtccacaggactggagcgggctttactgtgac
atccctaacctctcgtgccaaaacgcagctgaaaagaaaggtgtcctagtggagcgtttg
tgtatgaatggcggagtgtgtgtaaacaaggataacacacactcctgctcgtgtcaggtg
ggctggacgggcagctactgtgagatcgggatcgacgagtgtttgtccaatccctgcagg
aacggagggacgtgtgtggactaccaggcagaatatgactgccagtgtaagcctggttat
cagggagtaaactgcgagtatgatgtaaacgagtgtctgtcgaacccgtgtcgtaacgga
ggcagctgcatcaacctggagaatcagttctactgcgcctgcccacctggaaccaaaggt
gtgcggtgcgaggtggacgtcgacgagtgttccaccgagtatggctcgccctgtctgaac
ggcggtcgctgcatggacggtatcggtcactacaagtgcacgtgtcctccaggttttacc
ggtgatcactgcgaaggcgacattaacgagtgcagctcatctccgtgcaacaaactcggc
agcatcgactgtgtccagctcgccaacgactaccagtgtcgctgtcgcctcggttacacc
ggtcgtcattgtgagtcgatggttgatctttgtcagtcgaaaccgtgccacaacgggggc
aagtgctatatgaacacgagctcagtccatgggtacacctgcacctgtccacctggccat
acgggttctaactgcggtgatatcgagatctacacttgtgccaacctgcgatgtcagaat
ggcggatggtgccggttgtcctcactccgccagcctgagtgcgtctgcccatctggcttc
tccggtgcgctgtgcgaaaaccaaaatccaccctgctcgtgccaaaacggcggcgtatgc
gtgaaaggtccgcacaaatccaactcgttcttttgccactgcctggctggctacagcgga
gagcactgccagatcagagacaggactgcgtcctgcccttacgtggagtgtcgggaacgc
cgtggcgacagggtgtgtgacccacagtgtaaaaacgcagagtgcgactgggacggagga
gactgcactctgcaccggctccgcccgtgggagaactgcacagcctctgtaccgtgctgg
gagtactttcgtaatggacgctgcgacccagagtgcaataacgcagtctgcctcttcgac
agcttcgagtgcccgaagacctcgccgtccacgcctagcgtgtgcaagtatgacctgtac
tgtcgtgaccactatcagaacggctactgtaacgagggctgtaacaacgaggcgtgcggc
tgggacggcttagactgctccaccgacaagccggctcagctggcggacggcacgctgatc
atcgtggtgctgctgcagcccacagaacttctcggagatataaacggcttcctgcgctct
ctgggcatgttgcttcacaccaacctgcgcgtcaagcacgacgatcagcagcagcccatg
gtctatccgtattacggccccgaccacaacaacgcgcacgtcgactccgccggcgccaag
cgaatcggcaaaagggagctgaagaatgaggtcatcgggtcgaaggtgtatctggagatc
gataaccgtcagtgcgctgagacgacgcccagtgaatgtttcgccagcaccgaccaggcc
gcctcgtacatcgcagccgagtccctcaaggacgagctgcattatcccatcgtctctgtg
gatagtcttccatcttatccaccggataaaaatcctctcctctacctggtcgctgtggca
ggtggcatcatcctgcttatcctgattttgggcgttttgattgccaaacgtaaacgcaag
cacggcatcctctggatgccagacggattcctggccaagaaggacagcaagcggagagaa
ccagtaggccaggatgacttcggcatgaagaatcttcagaagtcacaggttgaaggactg
attgacggcagtgctggacatcactggccggaggaggagcatcggccaaagaagccaagg
ttggaagacaagccgttgttgggagtggatgcaggagtggatcgcagagagtggactctg
cagcaccacaaagctgctgatatcacccttaccccacctcaggctgatatcgacatggac
tgtctggacgttaacgtgaaaggacctgacggtttcactcctctgatgctggcgtctctg
cggggtggcagcagtcccgagtgtgttagcgtcttagccgaagaggaggaggagagcgga
gtcgatgagcctggcacaaacatgatcagtgacctgatctctcagggtgccacactcaac
gcacagacggagcgcacaggcgagactgctcttcacctggccgcccgctacgcccgcgcc
gacgccgccaagaggctgctggacgccggcgccgaccccaacgctcacgacaacttgggt
cgaacacctctgcacgctgccattgccgccgacgcacagggagtgtttcagatcctgata
cgtaaccgtgccacggagctggatgcgaggatgaacgatggaacgactcctttaattctg
gcagctaggttggccgtcgagggcatggtggaggagctggtgcactgccacgccgatgta
aacgccgtggacgatcacggtaaatctgctctgcattgggctgctgccgtgaacaacgtc
gaggccacactggtgctcctgaagaacggcgccaatcgagacatgcagaacaacaaggag
gagactccgctgttcctggcggcacgtgaaggcagtttcgaggcagctcaggttctcctg
gatcactactccaaccgtgacatcaccgatcatctggaccggttgccacgtgacacagca
caggaacggatgcaccacgatatcgttcgcctgctcgaccagtacaatctcgtgcacagc
ccgcattctggaccgaaccatgttggaaacggtgggggtggacacccctccatggtgtgc
cctggtaacggggtcatgggcatgcgaccggggcagcagaacaagaagaaccggcgtagc
ggtggtggcgccgccaaagtcggtggccctaatggccctgggggtggagtcaaagatctg
aaagagatgaagacaaagaggaggaagaaaccaaccggaggagaagcgacaggattggcg
gctacatccagtggtaccatggtaacctcaaccgtgactgctaacactaacggcaccaaa
ggaacagcaggaacaccaggcacgggtgtacctgaaagctcggtcacgatgtcgccggtg
gattcgctagaatcgccacattcatacacgacggatgtggcaggagctgctaccatggca
aaatcccctccgctgatgaccaccgcctcaacccgccccctcctgccccctgtcagccac
atgctagggcagcagcagagctgggtgggtgtgactaagcacggctatccctccccgcac
gtttttggccacatggtttcccaccagatgccgcaggcgcactcgggcctcccgcagcac
caccccggccaaggcatcctctcgcccgtgaacgtgagccgagagcagcttccgtcgatc
gtcaccttccagatgatggcatcgagaaaccaggcacttctcaaaccaaaccagcagggg
gccatgcagatgagtcaaacccaaccccagggtcttaaccacatgcactgcagcccggag
atgatgtatcccatgcaggatgcgaggctacaacatggcatcccacaccttcacagccac
gcccataacatggcagagcctcaggtgagacaggtgacgccgtaccatcagcagctacag
agcccagtggataaatacccgactcctccctcgcaccgcagctacaccagcggcgccggg
tccgaggtggtgacgactccgggtcagggctctgaagtcacaacaccggggcatggagct
ccaccttctagcgagcacccgtacctgactccgtcgcccgagtcaccagatccctggtcc
tcttcgtcttcgcctcactcgcattcagactggtctgatgtaaccacaagcccgcacggc
gctttgcacacacatgcgcacccacacacacatgcacacactcacgttccagaacaggct
tctctgctgcagccgcagccctcacagccagcgcagccgccgcagcaacagcagcaaccg
tgcagcagcgtgtacgcgtaa
DBGET
integrated database retrieval system
