Clarias gariepinus (North African catfish): 128529713
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Entry
128529713 CDS
T10780
Symbol
kcnn1b
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1b
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128529713 (kcnn1b)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128529713 (kcnn1b)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DExH14_plug
Mu_Gam-Sipho_Gp157-TOTE
DUF6775
Motif
Other DBs
NCBI-GeneID:
128529713
NCBI-ProteinID:
XP_053359165
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All DBs
Position
9:complement(639643..689997)
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AA seq
918 aa
AA seq
DB search
MRLVLVRPTNETSRVDSTVGASAARSTESESAPKRLGPQPAARDPQEEEEEEAVMRHRDA
RAVRPQQQQQQRAPHAASPHAHAPSAAAAPPLYTLPPPPPPSHSARGHRKPPSATGQPQR
GGAREPSSPPSSSSSSSQSHSQRRSCTVTRPSARALGSVSADCPGDPAWCGSRLAEDQSR
GIQWIKPAHRLSCSCGKEGGSLPEEQQQLQRPQQALEQSSGGGNPFTALLLHNPPPAPSS
PPPSSSSAAAAAAAAHQNQQHQHPRAPAGQPPETSAAAARALQDPQAARLQVQRLVRSSL
PESCARAPPHELRAHRPCTVQQQQQQQQQQPGARAEWHRDGDTNPTAEHEPQRHQGHQVS
ADGSRLSHAWSRSSLSPSGPTVPQIAMNSCKYNGGVVRPLGSRNLADLDSETQPLQTLHT
SGLEVVVSKGNGDEPGKPLREDAGNAPHKRNKDIGYKLGHRRALFEKRKRLSDYALIFGM
FGIVVMVTETELSWGVYTKESSYSFALKCLISLSTLILLGLIIMYHAREIQLFMVDNGAD
DWRIAMTYERILFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMF
LRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWI
IAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGA
GCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKI
DHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEEL
DKRIGHLEEKLDSIALSIQSLPELLNRAITQQQRHLLDGLIHHSTHSTHSSHSSHTSSAS
VRRRRSPSTAPHTSSDSG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggttctggttcgacccaccaatgagacgagccgcgtggactcgacggtgggg
gcctccgccgcgcgcagcaccgagagcgagagcgcgccgaagcggctcggtccgcagccc
gccgcacgcgacccgcaggaggaggaggaggaggaggcggtgatgcggcatcgagacgcg
cgcgctgtccgaccgcagcagcagcagcagcagagagcgccgcacgcagcctcgccgcac
gcgcacgcaccctcagccgccgcagcgccgccgctctacaccctgccgcctccgccgccg
ccgtctcacagcgcgcgcggacaccggaaaccgcccagcgcgaccggacaaccgcaacgg
ggcggcgcacgagaaccgtcatcaccaccatcatcatcatcatcatcatcacaaagtcac
agccagcggcgcagctgcaccgtcaccagaccgtcggctcgagctctcggctccgtttcc
gcggactgtcccggtgaccccgcctggtgcggctcgcgattggcggaggatcagtctcga
gggatccagtggatcaaacctgcgcatcgtctctcgtgcagctgcggaaaagaaggcggg
tcgttaccggaggagcagcaacaactgcagcggccacaacaagcgttagagcagagcagc
ggcggcgggaacccgttcaccgctctactgctgcacaacccgccaccggcaccttcatca
ccgccgccatcctcatcctcagcggcggcagcagcagcagcggcgcaccagaaccagcag
caccagcatccgcgcgctcccgcgggccagccgcccgaaaccagcgccgccgccgctcgc
gcgctccaggacccgcaggcggcccgattgcaggtgcagcggctcgtgaggagcagtctg
cccgagagctgcgcgagagcaccgccgcacgagctgcgcgcgcaccggccctgtaccgta
cagcagcagcagcaacaacaacaacaacaaccgggagcgcgagcggaatggcaccgtgac
ggagacacgaacccgaccgcggagcacgagcctcagagacaccaagggcatcaggtgagt
gcggatggcagcaggctgagccatgcttggtcgcgctcttcgctgtcgcccagcggcccc
acggtccctcagatagccatgaacagctgcaagtacaatggcggcgtggtgagaccgctg
ggcagcaggaacctggccgatctggactcggagacacagccgctgcagacactccacacc
tccggcctcgaggtcgtggtgtcaaagggcaacggcgacgagcctggcaagccgctgcgc
gaggatgctggcaacgcaccgcacaagaggaacaaggacattggctacaagctcggccat
cggagggcactgtttgaaaagcggaagcgcctcagtgactacgccctcatctttggcatg
tttggtattgtcgtcatggtgacggagacggagctttcatggggggtttacacaaaggaa
tcctcatattcatttgcactgaaatgccttatcagcctttccactctaatcctcctcggt
ctgattattatgtatcatgcacgagaaattcagctttttatggtggacaatggagcggac
gactggcggatagccatgacttacgaacgcattctgttcatcgtgctggagctcctggtg
tgcgccattcacccaatcccaggacagtacgttttcacgtggacggcgcggttggcgttc
acgtacacgccctctgtggccgacgctgatgtggacatcatcctgtccatccccatgttc
ctgcgtctctatttaatcggccgtgttatgctgctgcacagcaaactgttcacggacgct
tcgtcgcgcagcatcggcgccctcaacaagatcaacttcaacacgcgcttcgtcatgaag
actctcatgaccatctgccctggcaccgtgttgctcgtcttcagcatctcctcatggatc
atcgccgcctggacggtgcgagtgtgtgaaagatatcacgataaacaggaagtgacgagt
aacttcctgggtgcaatgtggttgatctccatcaccttcctgtccattggatatggagac
atggtgccacacacctactgtgggaaaggagtgtgtctgctgacgggaatcatgggggcg
ggctgcactgcgctggtggtcgcggtggtggccaggaaactcgagttgaccaaggctgag
aaacatgttcataactttatgatggacacgcaactctgcaaaagagtgaagaatacggct
gctaacgtactcagggaaacgtggctaatctacaaacacaccaagctcgtgaagaagatc
gaccacgccaaggtcaggaaacaccagcgcaagttcctgcaggcgatccaccaactgcgc
agtgtgaagatggaacagaggaagctgaacgatcaggccaatacactcgtcgacttagcc
aagacacagaatgtgatgtatgacctggtgtcggagctgcaggagcgcagcgaagagctg
gataagcggatcggtcatttggaggagaagctggactccatcgctctgagcatccagtct
ctgcccgagctgctgaaccgagccataacgcagcagcagcgccacctactggatggcctc
atccaccactccacgcactccacacactcctcacactcctcgcacaccagctcggcgtct
gtgcgccgccggaggtcgccctccaccgcccctcacacgtcctccgacagcggctaa
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