Clarias gariepinus (North African catfish): 128529758
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Entry
128529758 CDS
T10780
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar00514
Other types of O-glycan biosynthesis
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128529758 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128529758 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128529758 (colgalt2b)
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128529758 (colgalt2b)
Glycosyltransferases [BR:
cgar01003
]
O-Glycan biosynthesis
O-linked Gal type
128529758 (colgalt2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
128529758
NCBI-ProteinID:
XP_053359231
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Position
9:complement(2951818..2983637)
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AA seq
602 aa
AA seq
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MLAELCALLCALLCVSAGLDPVRPESAVLKPRVMIAVLARNSAHSLPHVLGCIDRLEYPK
ERVAIWAATDHNVDNTTAMLKEWMKSAQRRYHFVEWRPMEEPRSYTDELGPKHWSLSRFK
HLLKLRQAALEAARRRWADYILFVDSDNLLTNPRVLDLLIAENRTLVAPMLESRSLYSNF
WCGITPQGYYKRTPDYQPIREWRRLGCFPVPMIHSTFLLDLRRSSSRTLAFYPPHPDYSW
AFDDIMVFAFSAREAGVQMFVCNREHYGFLPIPLRADQSLEDEEESFTHTVTEALIDHQI
EPSEFVFVPPKPQDQMGFDEIFLINLKRRRDRRERMLSSLAALGVEVTIAEAVDGKALNS
SQLQALGIEMMPDYKDPYSGRVLTRGEIGCFLSHHSIWIQMVEKGLQRVLVLEDDVRFEP
RFKRRIQTIMEDVEKVQLDWDLIYLGRKRMQVAQPELSVDGVNNLVEADYSYWTLAYALS
LNGANKLLSAQPFSRMLPVDEFLPIMFNKHPNTAYMSHFETRDLRAFSVEPLLVYPTHYT
GEPGYFSDTETSTIWDDEAVSTDWDRSHAQKTAQQGRIRPVAQNSVTGETPPPAARASRD
EL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttggccgagctgtgcgcgctcctgtgcgcgctcctgtgcgtgtccgcgggtttggat
ccggtgcgtccggagtccgcggtgctgaagccgcgcgtgatgatcgcagtgctcgcgcgg
aactccgctcacagtctgccgcacgtgctgggctgcatcgaccgcctggagtaccccaaa
gagcgcgtggccatatgggcggcaacagatcacaacgtggacaacaccacggccatgctg
aaagagtggatgaaatcagctcagaggcgatatcactttgtggagtggagaccaatggag
gagccacgctcttacacagacgagttggggcccaagcactggtcgctgtcccgattcaaa
cacctgctgaagctcagacaggccgctctggaggcggctcgccgccgatgggccgattac
atcctgtttgtggacagtgataacctcctgactaacccgcgggtgttggaccttctgatc
gcggagaaccggactctcgtggcgcccatgttggaatcacggtcactctactctaacttc
tggtgtggcatcacgcctcagggctactataagcgcaccccagactatcagcccatccgt
gagtggaggcgtctgggttgcttcccagttcccatgattcactccaccttcctgctggat
ttgagacgcagctcgtctcgcacgctggcgttctaccctccgcatcccgactacagctgg
gccttcgacgacatcatggtgttcgctttttctgctcgcgaagcaggtgtacagatgttt
gtgtgtaacagggagcactatggtttcctacccattcctttaagagccgatcagagtctg
gaggatgaagaggaaagcttcacacacaccgtcaccgaggccctcattgatcaccaaatc
gagccgtcagagtttgtgttcgttcctccgaaacctcaggatcagatggggtttgatgag
atctttctgattaatctgaagcggagaagggatcggagggagcggatgttgagctctctt
gccgctctgggtgtggaggtcacgatcgctgaggctgtggatggcaaggctctgaactca
tctcagctgcaggcgctggggattgagatgatgccggattataaagacccatattcaggc
agggtgctgaccagaggagagattgggtgcttcctcagccaccattctatatggatacag
atggtggagaagggtctgcagcgtgtgttagttctggaggatgatgtgagatttgagccc
aggttcaagaggaggatacaaaccatcatggaggatgtggagaaggttcagctggattgg
gacctcatctatctggggcgtaagcgcatgcaggtggcgcagcccgagctctctgtggat
ggcgttaataacctggtggaggctgattactcgtactggacgctggcgtacgctctctct
ctgaacggagccaacaaactgctgtcagctcagcccttcagccgcatgctgcctgtggac
gagttcctgcccatcatgttcaacaaacaccccaacacggcctacatgtcccacttcgag
acgagagatttacgagcgttctcggtcgagccgttgctggtttacccgacgcactacaca
ggcgagccgggttacttcagcgacaccgagacttccaccatctgggacgatgaagctgtc
agtaccgactgggaccgatcccatgctcagaaaaccgcccagcagggccgcattcgtccc
gtcgcccagaacagcgtgactggggaaacgccgccccctgctgcccgtgcatcacgagat
gaactgtga
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