Clarias gariepinus (North African catfish): 128529850
Help
Entry
128529850 CDS
T10780
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128529850 (mindy4)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128529850 (mindy4)
Ubiquitin system [BR:
cgar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
128529850 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
TPR_30
Motif
Other DBs
NCBI-GeneID:
128529850
NCBI-ProteinID:
XP_053359378
LinkDB
All DBs
Position
9:complement(2372974..2382998)
Genome browser
AA seq
660 aa
AA seq
DB search
MGRDVEEVAAALVREYLSRKGLKKTIACMDEELPRTNSSINNRSELCRTLHLESLYKKNK
CEVQPLKTMLEIMTKERMKKVGDGKRRLVEGDQKEEKSPNHGFDSASADDVRREKDPAEL
HTDEMRVSETSTVSSPPQLDGNFNITSPTAGLGLEQKGRGVEGQESRGSRMRRGIMAGPI
AASSQENTRRRPARKTTASPALLPKNEEEDSVGLNWRSRSCSTDVSHTESDKQDITPSIR
QSGQGERTDRTPRLRAHKNESLPSTRPDALHMAGLVLDDLDDQEVSSGIAAVPDNNFSQH
PDWNKQPMNQKTATALKEIIFGSPVACFSEEWRCQSFTFSNRPALRYGIVQKKGGPCGVL
AAVQAAVLQKLLFEGTSSDALSERLSDAVRTKCLTDAVAGILWRAADRKNVTVAINSGRS
HFTPMGHYRSDGILEMITCVEVQSFDDLKLLIDQHIHQFESGPFGCVLLIVSAVLSRTIP
MVKEDMDVPTSTLIGAHGYCTQELVNLLLCGRAVSNVFDNEMKLDSGNGNFTLLKGIRER
CDIGMLSLFEHYNICKVGSYLKNPRFPIWVVCSESHFSVLFSPCEDLTSSRRSPREFDLH
YYDGLANQQEPIRLTVYSNSVVKTADNEDMDSDLTPPLELCIRTRWTDASVSWNESEPIL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggggagagatgtggaggaggtcgcggctgcactggtgcgggagtatctcagcagaaag
gggctgaagaaaaccatcgcctgcatggatgaagagcttccacggacaaactcgagcatc
aacaaccgctcggagctgtgccgaacactccacttagagagtctgtataagaagaataag
tgtgaagttcagccgctgaaaacgatgctggagatcatgaccaaggagcgcatgaagaag
gtcggagatgggaaaagacgcctcgtggaaggggatcaaaaagaggagaagtcaccaaat
cacggttttgactccgcctctgccgatgacgtgagaagggaaaaggatcccgccgagctg
cacacggatgagatgagggtgtctgagacgagcactgtgtcatctccaccacagctggac
ggaaacttcaacatcacgtcacctacagcaggcctgggcttggagcagaagggtagaggg
gtagaggggcaggagagcaggggcagtagaatgaggagaggcatcatggcaggtcctatt
gctgcctcctctcaggaaaacaccaggagacgtcctgccagaaagaccacagcgtctccg
gctcttttaccaaagaacgaagaagaggattcagtcggactgaactggaggagccgtagc
tgcagcacggacgtctcacacaccgaatctgacaagcaggacatcacgccgtctatcaga
cagagcggacagggcgagagaacggacagaacgcctcgactcagagctcacaaaaatgaa
tcattgcctagtaccagaccggatgcccttcacatggcgggattggttctagatgattta
gacgatcaggaagtctcatccggaatcgctgctgttcccgataacaacttctcacaacat
cctgattggaataaacaacccatgaaccagaaaacagctactgcgctgaaggagatcatc
ttcggctcccccgtggcctgcttcagcgaggagtggagatgtcagagcttcaccttctcc
aacagacccgctctgagatacggcattgtgcagaagaagggcgggccgtgcggagtgctc
gcagccgttcaggccgccgttctccagaaacttctgtttgaaggaaccagcagtgacgca
ctttctgagagactgtctgacgctgtgaggacaaagtgcctgactgacgccgtggctgga
atcctgtggcgagctgcagacaggaagaacgtcaccgtcgcaataaactcagggaggagt
catttcaccccgatgggccactacagatctgacggcattttggagatgatcacctgcgtg
gaggttcagagctttgatgacttaaagctgctgattgatcagcacattcatcagtttgag
tcggggccgttcggctgcgtcttgctcatcgtctctgccgtcttatccagaacgattccc
atggtgaaagaggacatggacgttcctacttccactctgattggcgcacacggctactgc
acgcaggaactggtgaacctgctgctgtgcggacgcgcagtttcaaacgtcttcgataac
gagatgaagctcgactcaggaaatgggaatttcaccctgctgaagggaatcagagagcgc
tgcgacatcggaatgctgtctttatttgagcattacaacatatgtaaggtcggctcttac
ctaaagaacccgaggtttccgatctgggtggtgtgcagcgagagtcacttcagcgtcctc
ttctcgccgtgtgaagatctgacgtccagccgtcggagcccacgggagttcgacctccat
tactacgatggcctggccaaccagcaagaaccaatcagattaacagtgtattcaaactct
gttgtgaagacggcggacaatgaggacatggattcggacctcactcctccgctggagctc
tgcatcaggacgaggtggacagacgcatccgtgagctggaatgaaagcgagcccatcctc
tga
DBGET
integrated database retrieval system
