Clarias gariepinus (North African catfish): 128529870
Help
Entry
128529870 CDS
T10780
Symbol
adamts10
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X1
KO
K08625
a disintegrin and metalloproteinase with thrombospondin motifs 10 [EC:3.4.24.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128529870 (adamts10)
Peptidases and inhibitors [BR:
cgar01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
128529870 (adamts10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
Reprolysin_3
ADAMTS_CR_3
PLAC
Reprolysin_2
TSP1_spondin
Reprolysin_4
TSP1_CCN
DUF4953
Motif
Other DBs
NCBI-GeneID:
128529870
NCBI-ProteinID:
XP_053359415
LinkDB
All DBs
Position
9:complement(3763099..3828043)
Genome browser
AA seq
1105 aa
AA seq
DB search
METVWRSLACVGVIAMVTAGVGVSISAQEGQAAFLSTLAHYEIAVPIRVGPRGDSLYNGE
ASDRHRRHRRSAETKQEVPEPQLYYQLSTPSTSLFLNLTLQNGLLSRKFRVEYWKKGRLA
WSHPYFSDCQYVGHLQHQPQSSTVALSNCNGLQGVIVAGREEYLIEPLVSAENQTSADEK
EARPHVVYKRSSLRHLYMDQSCGVIDEKPSKSFDWWQRTIKPPNQMGRGQLPLKRSVGRE
RYVETLVVADKMMVSYHGRRDIEQYILAVMNIVAKLFQDSSLGNAVNIVVTRLILLMEDQ
PTLEINHHAGKSLDSFCKWQKSIQQSNGHGNAIPENGIAPHDTAVLITRYDICIYKNKPC
GTLGLAPVGGMCEPERSCSINEDIGLATAFTIAHEIGHTFGMNHDGVGNPCGARSQETAK
LMAAHITMKTNPFVWSACSRDYITNFLNSGMGSCVNNIPPKQEFMYPTTAPGQAYDADEQ
CRFQYGIKSRQCKYGEVCSELWCMSKSNRCITSSIPAAEGTICQTSTIDKGWCYKRMCVP
YGTRPEGVDGQWGTWSPWEECSRTCGGGVSSSVRHCDSPRPTIGGRFCLGERKRFKSCNI
EECPPGSQDFREIQCSDFDSVAFRGKFYTWKPYRGGGVKPCSLNCLAEGYNFYTERAPAV
VDGTPCRDDSLDLCVNGECKHVGCDKILGSDAREDRCRVCGGDGSSCEAVEGIFNDSLPE
GGYEEVIRIPKGSVFIHIQELNISLNYLVLKGKSDQYFINGKLTIDTPRRFDIAGTTFHY
SRPADQPETLEALGPTNMTLVVMVLVREENQGIHYRFNPPVNRDTQSVFTWHSTSWSRCS
VSCAGGFQIQQVVCKKQSDYSVVFNHFCDKKSKPKEKKRPCNTAPCPPTWWVSEWSECSR
SCSGGVQTREVLCKRRISSTEEKVQDDSACVQPRPPLTEPCNNHTCPPEWHALDWSECTP
SCGPGYRQRVILCRSGESGDILDESECPKHSRPTTRMRCNLQRCPPPQWLIGPWSECSAK
CGVGHQMRAVQCVSHTGLPSNECLELHRPGFMQQCRSKCDISVPTDNPEECKDVNTVAYC
PLVLRFKFCSRPYFRQMCCKTCQGH
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggtgtggaggagcttggcctgtgttggggtcatcgccatggtaaccgccgga
gtgggagtgagcatctctgcccaggagggtcaagctgcattcctctccactctggctcac
tatgagatcgccgtcccgatccgtgttggccctcgaggcgattcactgtacaatggcgag
gcctcagacaggcacaggcgccatcggcggagcgccgagacaaaacaggaggttcctgag
ccacagctttattaccagctgtccacaccgagcaccagcctcttcctgaacctcacgctg
cagaatggcctgctgtcccgcaagtttcgtgtcgagtactggaagaaaggcagactggca
tggagtcacccatacttctccgactgccagtatgtggggcatctgcagcaccagccccag
tccagcactgtggccctcagtaactgcaatggcctgcagggggtgatcgtagctggtaga
gaggaatacctcattgaacctttagtttctgctgaaaaccagacaagcgccgatgaaaaa
gaagcgcgcccccatgtggtgtataagagatcgtctctgcgacacctttacatggaccag
tcctgtggcgtcattgatgagaaaccaagcaaaagcttcgattggtggcagagaacaatt
aaacctcccaaccagatgggccgtggccagctgccactaaagcgttcggttggccgtgag
cgctacgtagagaccctggtagtggctgataagatgatggtgtcataccacgggaggcgt
gacattgagcagtacattttggctgtcatgaatattgttgccaaactgttccaggattct
agcctggggaacgcagtgaacattgtggtgactcgactgatcctactgatggaggaccag
ccgactctggagatcaaccaccacgcggggaagtctttggacagtttctgtaagtggcag
aaatccatccagcagagcaacggccatggaaacgccatccccgagaacggcatcgcaccc
catgacacagccgtcctcatcacgagatacgacatctgcatctacaagaacaagccgtgt
gggacgctcggcctggccccagttggtggaatgtgtgagccggagagaagctgcagtata
aatgaagacatcggtctggccacggcgttcaccatcgctcacgagattggacacacgttt
ggtatgaatcatgatggcgtagggaacccttgtggcgctcgcagtcaggagacggcaaag
ctcatggccgcacacatcaccatgaagacgaatccctttgtctggtcagcctgcagccgc
gattacatcacaaacttcctcaactctggaatgggctcgtgtgtgaacaacattcccccg
aagcaggaatttatgtatccgactacggcgcccggtcaggcctacgatgcggatgagcag
tgccgcttccagtacggaataaaatctcggcagtgtaaatatggggaggtgtgcagtgag
ctctggtgtatgagcaagagtaaccgctgtataaccagcagcatccctgcagctgaaggc
accatctgccaaaccagcactatagacaaagggtggtgctacaagcggatgtgtgtgccg
tacggcactcgtccggagggagtggacggtcaatggggtacgtggtctccgtgggaggag
tgcagtcgtacctgtgggggtggagtctcttcctctgtacggcattgtgacagccccagg
ccaaccattggaggacgtttctgtctaggcgagaggaaaaggttcaaatcctgcaacatc
gaggagtgccctcctgggtctcaggatttccgagagattcagtgctcggattttgacagc
gttgctttccgggggaaattctacacctggaagccgtacagaggcggtggagtaaaaccc
tgctctctgaactgcctggctgagggttataacttctacactgagcgtgctccagcggtg
gtggatgggacgccgtgcagagacgactctctggatctgtgtgttaatggcgagtgtaag
cacgtgggatgtgataaaatccttggctcggatgctcgcgaggaccgctgccgcgtgtgt
gggggtgatgggagcagctgcgaggccgtcgagggcatcttcaacgattcgctgcctgaa
ggaggttatgaagaggtgatcaggattcctaaagggtctgtgttcatacatatacaagag
ctcaacatttctcttaattatttagttctgaaaggcaaaagtgaccaatacttcatcaac
ggcaagctgaccattgacacaccacgccggttcgacatcgccgggacgacgttccactac
agccgacctgctgatcagcctgagaccctcgaggcattagggcccaccaatatgactctt
gttgtcatggtgttggtaagggaagagaaccaaggtattcattaccgctttaacccccct
gtaaacagagacacccagagtgtcttcacctggcactcgacatcctggagccgctgctcc
gtctcatgcgctggagggtttcaaatccagcaggtggtgtgtaagaagcaatcggattat
tcagtggttttcaatcacttctgtgacaagaagagcaagcctaaagagaagaaacgtcca
tgcaacacagcgccgtgtcctccgacctggtgggtgagcgagtggtccgagtgcagcagg
agttgtagtggaggtgtgcagacgcgagaggtgctgtgtaagaggaggatcagctctacg
gaagagaaggttcaggacgattcagcatgcgtccagccgcggcctcccctcaccgaaccc
tgcaataatcacacctgtccacctgaatggcacgccctcgactggtctgagtgcactccc
agctgcggtccaggttacagacagagggtaattctgtgcaggagtggagagagcggagac
atcctggacgagtccgagtgtcccaaacatagccgtcccaccaccaggatgcgctgtaac
ctgcagcgttgtcctcctcctcagtggctcattggtccatggagcgagtgttcagctaag
tgtggcgtggggcatcagatgcgtgccgtgcagtgtgtgtcacacactggtctgccgtcc
aacgagtgtctggagctgcaccgacctggctttatgcagcagtgccggagcaagtgtgac
atcagcgtccccacagacaaccctgaggagtgtaaagatgtgaacacggtcgcatactgc
cccctggtgctcaggtttaagttctgcagccgcccatatttcagacagatgtgctgcaag
acctgccaaggacactga
DBGET
integrated database retrieval system
