Clarias gariepinus (North African catfish): 128529883
Help
Entry
128529883 CDS
T10780
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128529883 (gapvd1)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128529883 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF7260
Motif
Other DBs
NCBI-GeneID:
128529883
NCBI-ProteinID:
XP_053359433
LinkDB
All DBs
Position
9:complement(23015304..23101400)
Genome browser
AA seq
1448 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNCEVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCLHAKVLESTQFVDGYKTLGFQESVYGEFLWRLRENPRLVASCLVAGEKL
NQEHTQGVIHTVFTSLYGNCIMQEDEIYLLQVLRYLVEFELKENDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERFTPTQQERLFGEKGS
DSYSQKVQAAVECNQAKLVALVNSFINCLKQNTYCFPQSLRWIVSQMYKSLAQVDGLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMVDTDDGD
PRRKSNLSKFDKNCVAAFLDVMIGGRTVETPPMSSVNLLEGLTRTVVYITNNQLLALVDF
VRSVTAGDQLREEDHVALETLLANVPQSHAVKSNSLELTPQLSPATTPANRKNRLPLATT
RSRSRSNITQDSETDGSYQDPQQEVMPEEVLVISLGTSPQTMPGMMPENEVLNLQLSDEA
HGDAPADEAKLHGKPDKTLRFSLCSDNLEGVSEGPSNRSNSVSSLDMEAESVSDLGPGPS
VGNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDF
DPNIDEDRLQEISGAVVENMLGSLLCFAAPGPILLDPCGSTMSETTSEAWSVEVLPSDSE
TADLKQEERLQELESCSGVGSTSDDTEVREVSSRPSTPGLSIISGISATSEDIPNKIEDL
RSECSSDFGGKDSVISPDGEDSVHGAHSLSCMPAQADSLLAMFDPLSSGEGTGTIVRPKA
HTRPPHPPPDPPIPEACATGPSEPRTSHFSTHDLEHPKQRHSYPDRLVRSRSTDVVCAGR
RPNSDPGINRRTMMEDQDQAGAFATGSTTSPSKDSLKVESEDKKDSDDEKSDRNRPWWKK
RFVPAIPKVLYWTAQSEMPAPIAAFRKRDKHEKDDLGAEKVLQDEPLLLGQSCQAQAVED
ILDKYRNIKRTGPSEGASSTYDVPEMCKDGESEHKSHRHEGPQNMSTDDFTDSASQIAQT
QDSKFFFSDAKKKLRLALCSADSVVFPIIPTVTRNGLPDHTNSEDNEIVCFLKVQLAEAI
NLQDKNQMAQIQETMRCVGHLDPRTCRKLLTAIAEDYRKRAPYIAYLTRCRQGLQTSQAH
LEKLLQRVLRDKEVANRYFTTVCVRLLLEQMEARMQDFIRAFQGFTAADDKTAAVEDFLR
YLYGAMAHDAIWQYASEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQVLQEHINR
LSKVVTANHKALQIPEVYLKEAPWPSAQAEIRTISAYKTPRDKVQCILRMCSTIMNLLSL
ANEDAVPGADDFVPVLVFVLIKANPPCLLSTIQYICNFYASQLNGEECYWWMQFTAAVEF
IKTIDERK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcatactctggcgcaccacctgaagcaagagaggctgtacgtg
gcttcagagaaacaactcatccagcggctcaattgtgaagtactaaagacagcagaaaga
ctttaccgtgcagcttggatagccaaacaacaaaggattaaccttgatcgcctcatcctc
accagtgctgaggcttccccagccgaatgctgcttgcatgccaaggtactagagagcaca
caatttgttgatggctacaagactctgggctttcaggagagtgtctatggagagtttctt
tggcggctaagggaaaatccacgcctggtggcctcatgtttggttgctggggagaaactt
aaccaagaacatacacaaggagtgatccacacagtgtttacctcactttatgggaattgc
attatgcaagaggatgaaatctacctgcttcaagtcctgcgttacctggttgagtttgag
cttaaagagaatgataatccacgtcgtctgctacggcgaggcacatgtgcttttagtatt
ctgtttaagctattctctgaaggcctatactcagccaagctattcctcaccgccacctta
catgagcccattatgcagctgctggtggaagatgaagaccacttagaaactgatccagcc
aaagtgactgaaagatttaccccaacacaacaggagcgtctgtttggggagaagggctcc
gattcttactctcagaaagttcaggcagccgtggaatgcaatcaagccaagcttgtggct
cttgttaattcatttattaactgtttgaagcaaaatacttactgctttccacagagtttg
cgctggattgtctcccagatgtacaagtcactggcacaagtggatggccttgaggttgga
gaggtgaggaccatgtgcacagacctgttgctgacttgtttcatctgcccagccatcgtc
aaccctgaacagtatggaatcatctcggatgctccaattaatgaagttgcacgctttaac
ctaatgcaggtggggcagttgctacagcagttagctatggttgacacagatgatggcgat
ccacgacggaaaagcaatttgtcaaaatttgacaaaaattgtgttgctgcttttttggat
gtgatgattggtggaagaactgtggagacccctccgatgtcgtcagtgaaccttttagag
ggcctaacacgaactgttgtttatatcacaaacaatcagcttctggctttggtggacttc
gtgcgcagtgtaactgctggtgaccagctcagagaggaagaccatgtagcgctggagact
ctgctagccaatgtaccgcagtcccatgcagtcaagagcaacagtttggagcttacacct
cagctttccccagctacgacacctgcaaacaggaagaacagactgcccctagcaactacc
cgaagccgctcccgctccaatatcactcaggacagtgagacagatggcagttaccaggac
ccccagcaggaagtcatgcctgaggaagtgcttgtcatctcattaggaacttcccctcaa
actatgcctggaatgatgcctgaaaatgaggtgctgaacttgcaactctctgatgaagct
catggagatgctccagctgatgaggctaaactgcatggcaaacctgacaaaacccttcgc
ttctctttatgcagtgacaatcttgaaggagtctctgaggggccatctaaccgctccaac
tctgtctcatcgctggacatggaagctgaatctgtttcagacctagggccagggccatct
gttggtaatggtgttgaagctctgcagctacttgagcatgaacaagccaccacgcaggat
aacctggatgataaactccgaaagtttgagattcgagacatgatgggtttgacagatgat
cgagatatctctgagactgttagtgaaacctggagcactgatgtccttggtagtgacttt
gatcctaatatagatgaagacagacttcaagagatatcaggtgctgtggtggaaaacatg
ctggggagtctgctttgctttgcagcacctggccctattcttttggacccctgtggttca
acaatgtcagaaactacaagtgaggcctggagtgtggaagtcctgcctagtgactcagaa
acagcagatttaaagcaagaggaacgcttacaggagttagaaagctgctcaggtgtgggt
agcacttctgatgatactgaagtcagagaggtcagttcccgaccaagcacaccaggatta
agcatcatctcaggtataagtgcaacatctgaagatatcccaaacaagattgaagacctg
cgctcagaatgtagctctgattttggaggcaaagactcggtcataagcccagatggagag
gattctgtacatggagcacatagtttgtcctgtatgcctgctcaagctgactctctgctg
gctatgtttgatcctctctcctctggtgaaggtactggcaccatagttcggcctaaggca
cataccagaccccctcatcctcctccagacccaccaatcccagaggcttgtgctacaggg
ccttctgaacccaggacatctcacttctcaacccatgatctagagcaccccaagcagaga
cactcataccctgaccgtcttgtccggagccgcagtactgacgtggtctgtgcagggcgc
agacccaacagtgatccaggcataaaccgtaggaccatgatggaggaccaggaccaagca
ggtgctttcgctactggatccaccacttccccaagtaaagattcattaaaagtggagagt
gaagacaagaaggacagcgatgatgagaaatcagacaggaacagaccctggtggaagaaa
cggtttgttcctgctattcctaaagtgctctattggacagcacaaagtgaaatgccagca
ccaattgcagcattccgaaagcgggataagcacgaaaaagatgatctgggagcagagaag
gtccttcaagatgagcctttattactggggcagagctgtcaggctcaagcagtagaagac
atattggacaaatacaggaatatcaagagaactggcccgagtgagggagcgtcatccacc
tatgatgtaccagaaatgtgtaaagatggcgaaagtgagcataaatcccatagacacgag
ggcccacagaacatgtctacagatgacttcacagattctgccagccagattgcacagact
caagacagcaagtttttcttcagtgatgctaagaagaaattacgcctggctctgtgctct
gcagattctgttgtttttcctattatacccactgtaacacggaatggactccctgaccac
acaaactctgaggacaatgagattgtgtgctttctgaaagtgcagctggcagaggctatt
aacttgcaggataaaaaccagatggctcagatccaggagaccatgcgctgtgtcggtcac
cttgacccacgcacctgcagaaagctgctcacagcaattgctgaggactatagaaagcga
gctccatacatagcatatttgacccgctgccggcagggactgcagacttctcaggctcat
ctagagaagctgttgcagagagtacttagagataaagaagtggccaaccgctactttact
actgtctgtgtccgactgctgctagaacagatggaggccaggatgcaggactttatcaga
gcatttcagggctttacagcagctgatgataaaactgcagcagtggaggacttcttgcgt
tacctctatggtgcgatggcacatgatgccatctggcagtatgccagtgaggaacagcta
caggatgctcagatggctattgagcgcagtgtcatgaaccgcatcttcaaactggctttt
tacccaaatcaggatggagacatcctgcgagaccaggttcttcaagagcatattaatcgt
ctgtccaaagtagtcactgccaaccacaaggccctccaaatcccagaggtatatcttaaa
gaggccccatggccttctgcgcaagcagagatcaggactatcagtgcatacaagacgcca
cgagataaagtgcaatgcatcctgcgtatgtgttccaccatcatgaatctgctcagcttg
gccaatgaggatgcagtgcctggagctgatgactttgtccctgtgcttgtttttgtcctt
ataaaggcaaacccaccctgccttctgtcaaccattcagtacatctgtaatttttatgcc
agtcaactgaatggggaagagtgctattggtggatgcagttcacagctgccgttgaattt
attaaaaccattgatgagcgcaagtga
DBGET
integrated database retrieval system
