Clarias gariepinus (North African catfish): 128529890
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Entry
128529890 CDS
T10780
Symbol
magi1a
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128529890 (magi1a)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
WW
Guanylate_kin
MAGI_u1
PDZ_Tricorn
DUF6288
Motif
Other DBs
NCBI-GeneID:
128529890
NCBI-ProteinID:
XP_053359450
LinkDB
All DBs
Position
9:25747064..25870363
Genome browser
AA seq
1580 aa
AA seq
DB search
MSKSIQKRKHWTGRVSECSVRRSSDGELNVELRGGAESGQFTYIAAVTQDVVYQYGQLSE
GDLLLEVEGLPVSGLPLYDVLSLLDNTRDPVRMKTVRQGNKLNKDLRHYLSMRFLKSSPD
HDLQQTIRNSLYHYAVPCTTRPPRDGEVPGVDYNFLSVQEFLELEQCGTLLEIGTYEGNY
YGTPKPPSEPRSGTVITQDALRHALFGSWNSTPKRTKSYTDIHHARVAPDEQTGDADFST
DMNNAFTARSLFPSPLFTGDSGRQEVHAPSSALNNVAASPAATMAGSHHPQLPLEEDPLG
PLPDNWEMAYTENGEVYFIDHNTKTTSWMDPRCQDKQQKPLEECEDDEEGVHTEETELDR
NLIELELPPGWEKIDDPVYGVYYVDHVNRKTQYENPVLEARRKKQVDIQQPPEGERYVRE
WIEEHSSAGAPITAYIPNHLETYREPPGGPQLPPVPGCKRGKPFFTRDPAELKGTFISTK
LLKSRRGFGFTVVGGDEPDEFLQIKSLILDGPAALDGKMETGDVIVSVNDTIVLGYTHAQ
VVKIFQSIPIGSAVQLELCRGYPLPFDPDDPNTSLVTSVAILDKEPIIVNGQEAFDPPPL
GPCQTGMGTVGPVGMEPRPYSPTAEGMMMPESYGSDVVTLASSIATQPELITVHMEKGDK
GFGFTIADCGAIGSAIGGGQKVKQIVDYPRCRGLKEGDILVEVNKRNVQNMSHNQVVELL
SKCPKGSEVTMLVQRGVVQAKRSPKVVQLERKDSQGSSQHSVCSHRSTHTDSPARAVPAV
PPVPSETLAAPPPVPPPPTQPLPSLPPLEPPINGTLQKKPDPFKIWAQSRSMYESRMPDS
QEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVV
GKSHQLVVQLMQQAAKQGHVNLTVRRKTSYGVCKGEGDVPPSPASSHHSSTQAPSLTEEK
RTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPAMLPTVPTALQPYDVEIQRGENE
GFGFVIVSSVSRPDAGTTFAAGNACVAMPHKIGRIIEASPADRCGKLKVGDRILAVNGCS
ITNKSHSDIVNLIKEAGNTVTLRIIPGDETSNAALLTNAEKIATITTTHTPQSSSESRNN
KSKQAPPPPGTQMSHQMQDAEYYSVDLERDNKGFGFSLRGGKEYNMDLYVLRLAEDGAAV
RNGKMRVGDEILEINGESTKNMKHSRAIELIKNGGRRARLVLKRGDGSVPEYDGPNDGYP
APPGPQNIPEMRTLLPNGRFHLPSENSYTSEHHTNPWSQEQWQRGRGREREKDLGKEEYR
DHTHHPKHPQNHTWSNNRANTRGARSPLHSPSRSPENNKKISGRKVKKSESESGIAKLFK
TLRKETGFGKKPTDREARGRNRSPERRKGTKTRRGSLDRSPLRKNGSSPDRRRAKSMDRR
AEVSQRDYSPEQVSRGSNHNFNRQIGTPERHFQPQQKWQPQTPSRSYHEDSYLTSTPERP
NNGLKNGLSSSEREERYWSNGTPPRRYRRESDSSSNSSYLEEAAAPRLKDYYNAMKANST
ISIPQSKRRLYKENQADLSI
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagcatccagaagagaaagcactggaccggcagggtgagcgagtgctcggtg
cgcaggagctcagacggcgagctgaacgtggagctgcgcggcggggcagagagcggacag
ttcacctacatcgccgcggtcactcaggatgtagtctatcagtacggacagctgtctgag
ggggacttactgctcgaggtcgagggcttgcccgtgtccggcttgcccctgtacgacgtg
ctgtctctgctggacaacaccagggaccccgtgcggatgaaaacagtccgacaaggaaat
aagcttaataaggacctgcgacactacctgagcatgcgctttctgaagtcttcaccagac
cacgatctacagcagaccatcagaaacagcctctatcactatgctgtgccttgtaccaca
cggccaccgcgagacggcgaggttccaggggttgattacaacttcctgtccgtgcaggag
ttcctggagctcgagcagtgtggaacccttttggaaataggaacgtacgaaggtaactat
tatgggacacccaagccacccagcgagccccgcagtgggacagtgattactcaggatgct
ttgcgacacgccctttttggctcctggaattccacgcccaagcgcacaaagtcctacacc
gatatacatcatgctcgagtagcaccagatgagcagacaggagatgcagacttcagcaca
gacatgaataacgcttttacagcacgtagtctattcccctctcccctgttcacaggagac
tccggccggcaggaagtgcacgccccttccagcgcgctcaacaacgtggctgcgtctccc
gcggcgaccatggccggctcccatcatcctcagctgcccttggaggaagacccgctcggg
ccgttgcctgacaactgggagatggcctacaccgagaacggagaggtctacttcatagac
cacaacacaaagacaacctcatggatggatcctcgctgtcaggacaaacagcaaaagcct
ttagaagagtgtgaagacgatgaagaaggcgtgcacactgaggagacagaacttgatagg
aacttgattgaactcgaattacctccaggttgggaaaagatagatgacccagtgtatggt
gtatattatgttgatcacgtaaacagaaagacacagtacgagaacccggtgttggaggct
agacgtaagaagcaggtcgatatccagcagccaccagaaggtgagcgctacgtcagagaa
tggatagaggagcactcgtccgccggtgcgccgatcactgcatacattcccaaccacttg
gagacgtacagagagcctccgggcggcccacagcttccgccagtaccaggttgcaaacga
ggaaagccgttcttcacgagagaccccgcagaactcaagggcacgtttataagcaccaaa
ctactgaaaagcaggcgaggtttcgggttcacggtggtaggaggagacgagccagatgag
ttcttacaaatcaagagtctcatattagatggaccagcagctttggatggcaagatggag
acaggtgatgtcattgtcagtgtcaatgataccatcgttctgggctacactcatgctcag
gtggtcaagatcttccagtccatccctatcggctcggccgtgcagctggaactgtgccgt
ggctacccgctgcctttcgacccggatgaccccaacaccagcctggtgacctcggtggcc
atccttgacaaagagcccatcatcgtcaacggccaagaagccttcgacccgcctcccttg
ggcccctgtcagacggggatgggtacagtaggcccagtgggaatggagccacgcccctac
agccccacagcagagggaatgatgatgccggagagctacggtagcgacgtggtgaccctc
gcatcgtccatcgccacgcagcctgagctcatcactgtgcacatggagaaaggtgacaag
ggcttcggcttcaccatcgccgactgcggtgccatcggcagtgccatcgggggcgggcag
aaggtcaagcaaattgtggactacccgcgctgtcgcggcctgaaagagggtgacatcctg
gtggaggtcaataagaggaacgtgcagaacatgagccacaaccaggtggtggagctgctc
agcaagtgtcctaaaggcagtgaggtcaccatgctggtacagagaggggtcgtccaggcc
aagaggagtcccaaagtggtgcagttggaaaggaaggacagccagggaagctcccagcac
agtgtgtgcagccatcgcagcacccacacagactcaccagcccgcgccgtacccgccgtg
ccccctgtgcccagtgagacgctggcagctccgcccccggtacctcctcctccgacccag
cccctcccaagtttgcccccattggagccgcccatcaatggcactcttcagaagaaacca
gatcctttcaagatctgggcgcagtccaggagcatgtacgagagtcgaatgccggattcc
caagaacaagacatctttctctggagaaaagacaccggattcggtttcaggatccttggt
ggaaacgaaccaggagaaccgatctacatcggccatatagtgaagtacggtgcagcggac
gaggatggacgtctgcgctccggggacgagctgatatgtgtggatggaacagctgtggtg
ggcaaatcccaccagttagtggtgcagctcatgcagcaggcagccaaacagggccacgtc
aatcttacagtccgtcgcaaaacaagctacggagtgtgtaagggtgagggagacgtgcct
ccatcccctgcctcgtctcaccacagcagcactcaggcaccatctctgacggaggagaag
cgcacgccgcagggcagccagaactccttgaacacggtcagctcgggctcaggctccacc
agtggcatcggcagcggtggtggagggggaagcggcagtgctgtggtgcccgccatgctg
cccacagtgcccaccgccctacagccttatgatgttgagatccaaaggggcgagaacgaa
ggcttcggctttgtcattgtctcatctgtgtcacgacccgatgccggcactacattcgca
gcaggaaatgcatgtgtggccatgccccataaaatagggcggatcatcgaggctagtcca
gcggatcgctgtgggaaactgaaggtgggagatcgcatccttgccgttaacggctgctcc
ataaccaacaaatcccactcggacattgtcaacctgatcaaagaggctgggaacacggtc
acactgcgcatcatcccaggagatgaaacttcaaatgccgccctgctgaccaatgccgaa
aagatcgccacaatcaccaccactcacacacctcaaagcagcagcgagtccagaaacaac
aaatcgaaacaggctccacctccacctggaacgcaaatgtctcatcagatgcaggatgct
gagtattactctgtggacctggagagagacaataaaggctttggcttcagtttgcgagga
gggaaggagtataacatggacttgtatgtattaagacttgcagaagatggagcagccgtg
agaaatggcaagatgagggtaggagatgagattttggagattaatggggagagcactaag
aacatgaaacattcccgtgccatcgagctcatcaagaatggaggtcggcgagcgagactg
gtcttgaagagaggtgatggttctgtgcctgaatatgacgggcccaatgacgggtaccct
gccccacccgggccacaaaatattccggaaatgagaacgctgctgcccaatggccgcttt
cacctcccatcggagaacagctacacatcagaacaccacacaaacccctggtcccaggag
cagtggcagagaggtagagggcgtgaacgagagaaggatttgggtaaggaggagtacaga
gaccacacccatcaccccaaacaccctcagaaccacacctggagcaacaaccgtgctaat
acccgaggagcccgctcgcccctgcattccccttcacgttcccctgaaaacaacaagaaa
atctctggccgcaaagtcaagaaatctgagtcagaaagcggcatcgccaagctcttcaag
accttaaggaaagagaccggctttgggaagaagcccaccgaccgggaggctcgaggtcgc
aatcgctctccagaaagaaggaaaggcacaaaaacacgccgtggctctttggatcgctcc
ccattgcgtaaaaacggctcctcccctgaccgtcgtagggcaaaatccatggatagaagg
gcggaagtctcgcaacgtgactactctccagaacaagtctctcgtggatcaaatcacaat
tttaatcgacaaattggaacaccagaaagacatttccagccccagcagaaatggcagcca
cagacacccagccgaagctaccatgaagacagttacctcacttccaccccagagagaccc
aataacggcctgaagaacgggctttcttccagcgagcgggaggagagatattggagcaac
ggcacaccgccgagacgttaccggagagaatcagacagcagcagcaatagcagttacctt
gaagaggcggccgctccccggctgaaggattactacaacgccatgaaagccaacagcacg
atctcaattccccagtccaagagacggctttacaaagagaaccaagccgaccttagcatc
tga
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integrated database retrieval system
