Clarias gariepinus (North African catfish): 128529920
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Entry
128529920 CDS
T10780
Symbol
sema3ga
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga
KO
K06840
semaphorin 3
Organism
cgar Clarias gariepinus (North African catfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_2
Ig_3
ig
I-set
ATR1_N
Motif
Other DBs
NCBI-GeneID:
128529920
NCBI-ProteinID:
XP_053359515
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Position
9:14721727..14746408
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AA seq
740 aa
AA seq
DB search
MGIMGTKVILLLLVLCVCGVSCILRSAPRVALAYKDLMDTRTARPFSLSFNTSDYRILHM
DQDQGRLYLGSREYLVSLDMQNVNKEPLIIHWPAPTQRKGECQMTGKGKHGECANFVRMI
EPWNRTHLYTCGTGAYRPICTFINRGWKAEDYLFRLVSGYVDSGKGKCSYDPNHEDVAAL
INGNLYAGVHVDFMGADPAIFRMMGSRPAIRTEQSDSRWLNEPVFIQIKQIPDSSEANDD
KLYFFFREKSQDSGGTASPSVLARVGRVCLNDEGGQKSLVNKWTTFLKARLVCSVMGVDG
VETFFDELRDVFIQSTQDERNPMVYAVFSTAGSVFKGSAVCVYSMADIRNVFNGPFAHKH
GHNYQWTMYTGKIPYPRPGTCPGGTFTPNLQSSKAFSDEAVNFIRAHPLMYHPVYPIHKR
PLVVRSGVDYRFTTIAVDQVDAVDGRYEVFFLGTDRGTVQKVIVLPKDPTTMEELTLEEV
EVFRTPVPVKTMRISAKRQQLYVSSDVGLTQVSLHRCGVYGKACSDCCLARDPYCAWDGE
SCTPFTQATKRRSRRQDVKHGDPLRQCRGFNAKVERKLKETVQFGVEGSSTFLECVPRSP
QATVKWLYQKDGRRKVLNREGEVLNTPQGVLLKSLTHSDAGLYHCLATENNFKHTLARVS
LRILDRDIAVALTVPDDENKEEERHHKPEARPLSGNVQRLEPEMRVIHQYCQSYWEQLNE
QGQSKRPNRRHTEGHEPSGG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggcattatgggaaccaaagtcatcctgttgctgctggtactgtgtgtttgcggtgta
tcctgcatcctgcgttcagctcccagagtggctttagcttataaagatctaatggacact
cggacagcaagaccattcagcttgtcctttaacaccagcgattaccggatcctccacatg
gaccaggatcagggtcgtctttacctgggcagccgggagtacctcgtctccctcgacatg
cagaacgtcaacaaggagcctctcattattcattggcctgctccaacacagagaaagggg
gagtgtcagatgacgggcaaaggaaagcatggagagtgtgccaactttgtgcgtatgatc
gagccatggaacaggactcatctgtacacatgtggcactggagcttacagacccatctgt
acgttcataaatagaggctggaaagctgaggactacctctttaggctagtctctggatat
gtggattcaggaaagggtaaatgctcctacgatccaaatcacgaagatgtggctgctctc
atcaatggcaacctgtatgctggtgtgcatgtggactttatgggtgctgacccagctatc
tttaggatgatggggtccaggccagctattagaacagagcagtctgactccaggtggctc
aatgaaccagtgttcatccaaataaagcagattcctgacagctccgaggcaaatgatgac
aagctttactttttcttccgggagaagagtcaggactctggaggaacagcgagccccagc
gtgttggccagggtgggacgagtgtgtctgaatgatgagggaggccagaagtctctagtt
aacaagtggacaacgtttctaaaagccaggctggtgtgctccgtgatgggtgtggatggt
gtggagacgttctttgatgagctgagggatgtctttattcagtccacccaggatgagaga
aaccctatggtgtatgctgttttctccactgcaggatctgtttttaagggatcagctgta
tgtgtgtactccatggctgatatacgtaatgtattcaatgggccttttgcccacaaacat
gggcacaactaccaatggacaatgtacaccggaaagatcccctaccctcgacctggaact
tgtcctggaggtacgtttacaccgaatttgcagtcttcgaaggcattctcagatgaggct
gtgaacttcatccgtgcgcacccgctcatgtatcaccctgtgtaccctatacacaagcgc
cccctggtggtgcgttcaggcgtagactacaggttcaccaccatcgccgtggaccaggtg
gatgctgtggatgggagatatgaggtgttttttctaggcacagatcgtggaacggtacaa
aaggttatagttcttcccaaagatccaaccactatggaagagctgacattagaggaagtg
gaagtttttaggacaccggttcccgttaaaacaatgaggatttctgctaaaaggcaacag
ctgtacgtgtcttcagacgtaggtcttacccaggtgtcactgcatcgctgtggggtgtat
ggtaaggcttgctccgactgctgcctggctcgtgacccctactgtgcatgggatggagag
agctgtactccattcacacaagctactaaaaggaggagcagaaggcaggatgtaaaacat
ggtgaccctctacgtcagtgtcgaggattcaatgctaaagttgagaggaaactgaaggag
acggtgcagtttggcgtagagggaagcagcacgtttttggagtgtgtaccacgatcgcct
caggctactgtcaaatggctgtaccaaaaagacggaagaaggaaagtgcttaatagagaa
ggagaagttctaaacacacctcaaggtgtcctgctaaaatccctcacccactcagatgcc
gggttataccactgcttggccactgagaataacttcaaacacactctagcccgcgtctcg
ttgcgtattctggaccgtgacattgctgtggccctgactgtaccagatgatgagaataaa
gaagaggaaaggcatcacaagcctgaagcccgtcccctatctggcaacgtgcaacgctta
gagcctgagatgcgcgtgatccaccagtattgccaatcatactgggaacagctcaatgag
caaggacaaagcaaacgtccaaatcgcaggcacacggagggtcacgagcccagtggaggc
tga
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