Clarias gariepinus (North African catfish): 128529921
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Entry
128529921 CDS
T10780
Symbol
nfx1
Name
(RefSeq) transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128529921 (nfx1)
04121 Ubiquitin system [BR:
cgar04121
]
128529921 (nfx1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128529921 (nfx1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
128529921 (nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
128529921
NCBI-ProteinID:
XP_053359519
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All DBs
Position
1:37550451..37567160
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AA seq
1076 aa
AA seq
DB search
MAEASGQGTEQPNYVPGRTGQAASGRGHPRSGHNRKRGGHRGGHLEEQNELYDYEAKHAS
HNSSSARFETRGGRGRGRGGRGGRGNSERWSQGQRWSRNESDNGSSVQDNRSDLGQQFSG
LPAYSNRENQQKYPEEACMREFQHEPKDSWPRMSRRGRDTRKPLPRLGANQDDHAADVDH
TASVVATELEHEHRNNRGWRGGGRQGHSWKKGPAVHASDQGNWRERPPPPTHTDKAEEEK
VREDKPRGSKEEPNWRGASTKEHGRRPQNQEQGQRKGGRPEKRTGPVKRVELPKSKETQT
GCLIEQLTEEKYECMVCCDVIRLMAPVWSCNSCFHVFHLNCIKKWARSPASQADESGEGW
RCPACQNVALKFPTSYICFCGKVTNPEYQHREIPHSCGEVCGKKRTGGDCIHRCNILCHP
GPCPQCPAFTTKSCVCGRTSKQVRCSQTGALRCDQECGAQLNCKQHCCTQICHQVPCQPC
QLSVQQVCYCGVVHREVACGTDQENFDGSGYFSCHKPCGKMLECHAHRCQKVCHPGRCQT
CPLLPILVSSCPCGQTPLAKLLELGYPERRCCTDPIPSCGKVCSKPLPCGDIDTIHFCDK
LCHEDKCGPCPLTSTVKCRCGSKSKEVPCAMIHSEDELLFTCEKRCSKKRSCGRHKCGEM
CCVDSKHKCTIICGYKLNCGLHRCQEVCHRGNCQPCWQTGFDELPCYCGETVMFPPIPCG
TKPPECKNTCTRQHDCDHPVLHSCHSEEKCPPCTHLTKKWCMGNHEQRSNIPCHLQDISC
GLVCNKLLSCSHHRCKRICHRGECQVEGDCKQPCPHPRPECGHPCNAPCHPGTPCPHTTC
NAKVAMQCDCGRRKETIPCMDATSSSQRYAAIAVASKLSDMQLGESVNIAQLTKKDQKQA
RLECDQECATLERNRRLAEALQVDPTVDPFNTKSTTCKYSDTLKEDARKDFKFVSEVEEE
IKNLVELANKGKQPKKSHCFPPMKRDQRRIVHELAEVYGLESVSFDSEPKRNVVVTAVRG
KSACPTSTLTALIERETAARAPPPIAHIKQCSSKDTSSAWQKHSKEDPIDYFDVQD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcctcggggcaaggcacagaacaacctaattatgtaccagggaggaccggc
caggcagcgtccggaaggggtcatccacggtcaggccacaatagaaaacggggaggtcat
aggggaggtcatctagaggagcaaaatgaattatatgactatgaagcaaaacacgcatca
cacaacagctcatctgctagatttgagacaaggggagggaggggaagaggaagaggaggg
aggggaggtaggggtaatagtgagcgttggtcccagggtcaacgatggtcaaggaatgag
agtgataatggctcctcagtgcaggacaacagatctgaccttggccaacagtttagcggc
ttacctgcgtactccaatagggagaatcaacaaaaataccctgaagaagcatgcatgcgc
gagttccaacatgagcccaaagacagctggccacgaatgtctaggagaggtcgagataca
agaaagccgttacccagactgggagcaaatcaggatgatcatgcagcagatgtagatcat
acagccagtgtagtggccaccgaattagagcacgaacacaggaacaataggggatggaga
ggaggaggaaggcagggtcactcttggaagaaggggcctgctgtacacgctagcgaccaa
ggcaactggagagagagaccaccaccaccaacgcacacggacaaggcagaggaagagaaa
gtgagagaagacaaacccagaggaagcaaagaggagccgaactggagaggtgcaagtaca
aaagagcatgggagaagacctcaaaatcaagagcaaggacaaaggaaaggaggacgtccc
gagaagaggactgggccggtgaaacgtgtcgagctgcccaagagcaaagagacccagacc
ggttgcctgattgagcagctgacagaggagaaatacgagtgcatggtgtgctgcgatgtg
atccgtctcatggcaccggtatggagctgtaacagctgcttccacgtcttccacctgaac
tgcatcaaaaagtgggctcgctctcctgcgtcgcaggctgatgagagtggcgaaggctgg
cgttgtcctgcttgccaaaatgtggcattgaagttcccaacatcttacatctgcttctgt
gggaaggtgaccaatccggagtaccagcacagagagattccacacagctgtggtgaagta
tgtgggaagaagaggactggtggagactgcattcaccgctgcaacattttgtgccaccca
gggccttgtccacagtgtccagcgtttactactaaatcctgcgtttgtggaagaaccagt
aagcaggtgcgatgcagtcagacaggagctctgcgctgtgaccaggagtgtggagctcag
ttaaattgcaaacagcactgctgtacacagatttgccatcaggtcccgtgtcagccatgt
cagctcagtgtgcagcaggtctgttactgcggggtggtgcacagggaggtggcatgtggg
actgaccaggagaactttgatgggtccggatatttctcctgccacaagccatgtggaaag
atgctggaatgccatgctcaccgctgccagaaggtgtgtcacccaggacggtgccagaca
tgccctctcttgcccattctggtgtctagctgcccttgtggacagacgcctttagccaag
ctgctggagctcggctacccagagagacgatgctgcaccgacccaattccatcctgtgga
aaggtctgcagcaaaccattgccttgtggtgacatcgacaccattcatttttgtgataaa
ctttgccatgaggacaaatgtggcccatgccctctcacatccaccgttaagtgcagatgt
ggcagtaagagcaaggaggttccatgtgctatgatccacagtgaagacgaattgctgttt
acttgtgagaaacgttgcagtaagaagcgctcatgtggcagacacaagtgtggagagatg
tgctgtgtggactcgaagcataagtgcacaattatctgtggctacaagcttaactgtggt
cttcaccgctgtcaggaggtgtgtcacagaggaaactgccaaccctgctggcaaaccggt
tttgatgaactgccctgctactgtggtgaaacagtcatgttcccacctatcccctgtggc
accaaaccacctgagtgcaaaaacacctgcacacgccaacatgactgtgatcacccagtt
ttgcactcctgccacagtgaggagaaatgtcctccctgtacccacctcaccaagaagtgg
tgcatgggcaaccatgagcaaagaagtaatatcccgtgccacctgcaggatatctcgtgt
ggtttggtctgtaataaattattgtcctgtagtcatcaccgatgcaaaagaatatgccat
cgtggagaatgccaagttgaaggtgattgtaagcagccttgccctcaccccagacctgag
tgtgggcacccctgtaatgccccatgccaccctggcaccccctgcccacacaccacttgc
aatgccaaggtggcaatgcagtgcgattgtggccgcaggaaggagactattccttgcatg
gacgcaaccagctcctcccagagatatgcagctattgctgtggccagtaagttgtcagat
atgcagttaggagagtctgtcaacatcgctcagctcacgaagaaagaccagaaacaggcc
aggctggaatgtgatcaggagtgtgcaacgctggagagaaatcggcggcttgcagaggcg
ctgcaggttgacccgacagttgatccattcaacaccaaatccactacgtgtaaatacagc
gacacactcaaggaggatgccagaaaggattttaagtttgttagtgaggtggaggaggag
atcaagaatctggttgaattagcaaacaagggcaaacagccaaagaagagtcactgtttc
ccccccatgaagcgtgatcagcggagaattgttcacgagctggcagaggtgtacggctta
gagagcgtcagcttcgacagcgaacccaaacgcaacgtggtggtcacagccgtcaggggg
aaatctgcatgccctacctctacactgactgcactgatcgagagggagactgctgcccgg
gccccaccacccatcgcccacatcaaacaatgcagcagcaaggacactagcagtgcttgg
cagaagcattctaaagaggaccctatcgattactttgacgttcaggattga
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