Clarias gariepinus (North African catfish): 128529962
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Entry
128529962 CDS
T10780
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128529962 (apex2)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
128529962 (apex2)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
128529962 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
128529962
NCBI-ProteinID:
XP_053359577
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All DBs
Position
9:16839637..16843863
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AA seq
579 aa
AA seq
DB search
MKIVTWNINGIRTFKNEIKSTLDSFDADIICVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRTGYSGVATFCKDSATPFAAEEGLTGRLVNHGEAVGCYGDQGDFSIDEIQSLDNEGRAV
ITQHKFKHSVEAEGLETLTVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAILGPQSHV
IVLGDINTSHQPIDHCDPDDVENFEENPGRKWLDSFLFGPAEKGNGDEGSESSHTCLCSG
NFIDTFRHFHPSRINAFTCWSTRTGARQTNYGTRIDYIFANRLLVEKNLLNADIMPEVEG
SDHCPIWAKLSCVMVPSPRCPPLCTCFMPEFMGKQQKLFRFLVKVSDQHTVSRDIENLLP
GSQEAGEICENLSPLPGGGASGSKRPSDRSTESSEFKGKKIKHAKKATKPQGSLLTFFKP
KPTQVSSSQNLGSAENTGLNSDTVMSKIQKDADDVNSSSATHSMLTECQAEVKERSEICL
FGVKMAKEDDECGQIQIQSNDTSIQETKKGSRPDFWKSVLHGPPQPPMCNSHNEPCVLRT
VKKPGTNLGRQFFVCARPQGHTSNPQARCNFFAWVDKRK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcacttggaacataaatggcataaggacctttaaaaacgaaatcaaatct
acactcgattcgtttgacgctgatataatatgtgtgcaggaaaccaaagtgacgcgcgac
ctgcttgacgagaggactgcaattgtggagggatacaactcttattttagctttagccga
ggacgcactggctactcaggagttgcaacgttttgtaaggactctgccactccattcgct
gcagaagaaggactgacaggtcgccttgtcaaccatggagaagctgttggttgctatggt
gatcagggggacttctccatagacgagatccagtcacttgataatgaaggaagagctgta
atcacccaacacaagtttaaacattcagtggaagcagaaggattggagacattgactgtc
attaatgtgtattgcccacgtgcagatccagaaaagccagagagaaagcagtttaaactg
cagttttacaaactcctacagagcagggctgaagccattttgggtcctcaaagtcatgtg
atcgttttgggtgatatcaatacctctcaccagcctatagaccattgtgacccagatgat
gtggagaactttgaggagaatccagggagaaagtggttggacagctttctttttgggcca
gcagaaaaggggaatggtgatgaaggttctgagtcctcccacacttgtctgtgcagtggc
aattttattgacacctttcgccatttccatccttcacgtatcaatgccttcacatgttgg
tctacacgtacgggtgctaggcaaaccaactatggcacccgcatcgactatatctttgcc
aatcgtttgctcgttgagaaaaacttgctcaatgcagatatcatgccagaagtggaaggt
tctgatcattgtcccatatgggctaagctaagctgtgttatggtgcccagtcccaggtgt
ccacctctgtgcacttgttttatgcccgagttcatgggaaagcagcagaaacttttccgc
tttctggttaaggtttctgaccagcacacagttagcagagacattgaaaaccttttacct
ggatctcaagaggctggggagatttgtgagaacctcagccctctaccaggaggtggagct
tctgggagcaagagaccttcagatcgatcaacagagtcatctgaatttaaaggaaaaaaa
atcaaacatgctaaaaaggcaactaaacctcagggcagtctcctgaccttctttaaacct
aaaccgacccaagtatcttcaagtcagaacctaggctcagctgagaacacaggcttgaat
agtgacactgtcatgtctaagatccaaaaagatgcagatgatgtcaacagcagcagtgca
acccacagcatgcttacagaatgccaagctgaggtgaaagaaaggagtgaaatatgtttg
tttggggtcaaaatggcaaaggaagatgatgagtgtggtcagattcagatccaaagcaac
gacacgtccatccaggagaccaagaaaggatctcgtccagacttttggaaatcagttttg
catggaccaccccaacccccaatgtgtaactcgcacaacgagccgtgtgtcctgcggact
gtgaaaaaacctgggacaaatttgggccggcagtttttcgtgtgcgcccgtcctcagggt
cacacgtctaaccctcaggccaggtgtaatttctttgcctgggtggacaaacgcaagtaa
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