Clarias gariepinus (North African catfish): 128530000
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Entry
128530000 CDS
T10780
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
Brite
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128530000
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128530000
NCBI-ProteinID:
XP_053359647
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Position
9:complement(1428463..1509878)
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AA seq
2155 aa
AA seq
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MARFGDAVPAAHGVLDGGSERGRTREPPPPSSSTGGVSPVFKQTKAQRARTMALYNPIPV
RQNCFTQNRSLFIFSEDNLVRKYAKRIIEWPPFEYMILATIIANCIVLALEQHLPGEDKT
PMSKRLEKTEPYFIGMFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAEA
HMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYSGRLHKTCVPFPDIRENETVPDWEAEFPCGDRRCPHKYNCSGPWIGPNDGITQFD
NILFAVLTVFQCITMEGWTTVLYNANDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGE
FAKERERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRA
TTIKRRGVDSIRHGSEEQCVDIASVGGPMNRVSIRSVRRGPAAYFRRKERMLRISVRRMV
KTHTFYWTVLGLVALNTICVAIVHHNQPEWLSNLLYYAEFLFLGLFLTEMFLKMYGVGPR
LYFHSSFNCFDFGVIVGSIFEVVWSCFRPGMSFGISVLRALRLLRIFKITKYWASLRNLV
VSLMNSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFEEYTPTNFDTFPAAIMTVFQIL
TGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEEEEAFNQKHALQKAKEVGPMSSFMSSERERRRRLTMSVWEQRTSQLRRHRQTSSRE
ILYGSSVCHHHKLARSTEISHSPEISSALDPLESLEPSMEEQNVSASLPDPPGSETPDTK
DVCQNSAQTHTEISATDQLLHPLDPAKEEQDIDNDQVSGNTSEEPQDKNHLSVRRLNGER
RQRGTRKYSKYSKHGKHRTSETHHQRHDEPNAHERSRSASQERRTRNEDEEEDEKRKSNN
NGGVNQDERTAEERDLAADSEPATLQISDSTTLDSVVPGKAATEGENNNNQDKTSLSTNV
VIDDMDTAPGLELSTITAANSKELEASKSEKEDEEAANGSRTPPDSMFIFKPHNPIRRAC
HYVVNLRYFEMCILLVIAASSIALAAEDPVATNSDWNKVLRYFDYVFTGVFTFEMIIKMI
EQGLILHDGSYFRDLWNVLDFIVVVGALVAFALTNVLGNNKGRDIKTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSKDTE
KDCQGYYIDYNKDKKEVKKREWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTD
EDQGPSRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERAC
IDFAISAKPLTRYMPQNRHTVQYRLWHFVVSPSFEYTVLTMITLNTIVLMMKYYSAPPVY
DAVLKHLNTAFTVLFSIECVLKILAFGFVNYFRDTWNIFDFITVLGSITEIVVDQQSASF
NMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFG
NIKLNEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQDCEADPSLTLTSDP
DGGCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRMWGQ
YDRAACGRIHYKDMYKVVRTISPPLGFGKNCPHRVACKRLVLMNMPVDAEMTVHFTSTLM
ALIRTALEIKIARGGEDRGQMDIELQKEISIIWPHLSQKSLDLLVPINKASDMTIGKIYA
AMMIMDYYKQNKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLTHSAGNALT
RGGFVALSPISPQELFMQPVTPEQGEEPEEEEEEEEYTPHYRPQHSPETVTSENKLMKRS
FSTIGDQCVNGVWQEEFSLERVSPDRLERPRQRSFRGVRANLREPMCKERGRSKERKHLL
SPDPSRCNSEERNQPRTHDTPQTHTRSPSEGRTHTQGDASESPLASSSSDSRGRRQLPPT
PSRPRPHISYSPLVCRSHLTTEDGQSRTQSAIEGVGSVISPASPQRYTSEPYLPLHDDSN
SPEEMLTFEAAIATSRGRGHVVSSAPQLRHTWQMPNGHFRKGCELLSDTDEDDRC
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggacgcggtgccggcggcgcacggggttctggacggcggctcggag
cgcggccggacccgggagcccccccctccttcctcctccaccggcggagtgtctccggtg
ttcaagcagaccaaagcgcagcgcgctcgcaccatggccctgtacaaccccatcccggtc
cggcagaactgcttcacccagaaccggtccctcttcatcttcagcgaggacaacctggtg
cgcaagtacgccaagaggatcatagagtggccgccattcgagtacatgatcttagccacc
atcatcgctaactgcatcgttttggctctggagcagcatttacctggagaggacaagaca
cccatgtcaaagaggctggagaaaaccgagccgtacttcatcgggatgttctgtttcgag
gcggggataaagatcgtagcgctgggattcgtgttccacaaaggctcgtacctgaggaac
ggctggaacgtcatggacttcatcgtggtgctcagcggaatcctggcaactgcagaagct
cacatgaacattccagttgatctgaggacgttacgagctgttcgggttctgcgtcccctc
aaactggtctcaggaattccaagtctgcagatcgttttgaagtccatcatgaaggccatg
gttcctctgctgcagattggcttgttgttattttttgccattttaatgtttgctatcatc
ggcctggagttctacagcggccgcctacacaagacctgcgtcccttttccagatatacgg
gagaacgagacggtgccggactgggaggcggagttcccgtgtggagatcgtcgatgtccc
cataagtacaactgcagcggcccgtggatcggcccgaacgacggcatcacgcagttcgac
aacatcctgttcgccgtcctcaccgtcttccagtgtatcaccatggagggctggaccacc
gtcctgtacaacgccaatgatgctttaggtcccacgtggaactggctgtacttcatcccc
ctcatcatcatcggctccttcttcgtgctcaatctggtgctgggggttctgtctggagag
tttgctaaggagagagagcgtgtggagaacaggagagcgtttatgaagcttagacgtcag
cagcagattgaaagagaactgaacgggtatcgagcttggattgaccgagcagaggaggtg
atgctggcagaggagaataaaaactcaggtccttcagctctggacgtgctgaagagagcc
accaccataaagaggaggggcgtggacagcatccgccacgggtctgaggagcagtgtgtg
gacatcgcttctgtcggtgggccgatgaaccgtgtgagtatacgcagcgtgagacgaggg
ccggcggcgtacttcaggaggaaggagaggatgttgcgtatctcagtccgtcgcatggtg
aagacacacaccttctactggaccgtgctgggactcgtggccttaaacaccatctgtgtg
gccatcgtccatcacaaccagcccgagtggctctccaacctcctctattacgcagagttt
ctgttcctgggtctgttcctgaccgagatgttcctgaagatgtacggcgtcggccctcgg
ctttactttcactcctcctttaactgcttcgactttggagtgatcgtcggcagtatcttc
gaggtggtctggagttgcttcagaccgggaatgagtttcgggatcagcgtcctgcgtgcg
ctccggctgctgcggatcttcaaaatcaccaagtactgggcgtctctgaggaacctggtc
gtgtccttgatgaactccatgaagtccatcatcagtttgctcttcctcctcttcctcttc
atcgtggtcttcgctctgctggggatgcagctgttcggggggaggttcatctttgaagaa
tacactcctacaaactttgatacatttccagctgcgatcatgaccgtgtttcagatcctt
acaggggaggactggaacgaagtgatgtacaacggcattcgctctcagggcggagtcaag
tctggaatgtggtcttccatttacttcatcgtcctcacgctgttcggaaactacacactc
cttaacgtcttcttggctatcgctgtagacaatttagccaacgcgcaggagctcaccaag
gatgaagaggaggaagaggaagcgtttaatcagaaacacgcgctgcagaaagccaaggag
gtcgggcccatgtcgtccttcatgtcctcagagagagagagacgccggcgtctgaccatg
tccgtgtgggagcagaggaccagccagctccggcgccatcgccaaacgtccagccgggaa
atcctctacggctcgtccgtttgccaccatcacaaactggctcgctccaccgagatctca
cactccccggagatcagctccgcgctcgaccctctggaatctctggagccatccatggag
gagcagaacgtctccgcctcgctgccggatcctccgggatctgaaactccagacaccaaa
gatgtgtgccaaaacagcgcgcagactcacacagagatcagcgccacggatcagcttctg
catcctctagacccggcgaaagaagagcaggacatcgataatgaccaggtctcaggaaac
acctctgaggaaccccaggataaaaaccacttgagcgtgcggaggctgaacggagagcga
aggcagcgagggacgcggaaatacagcaagtacagtaaacatggcaaacataggacctca
gaaacacaccatcagaggcacgacgagccaaatgcgcacgagcgcagccgctccgccagc
caggaacggaggacaaggaacgaagacgaggaagaggacgagaagagaaaaagtaacaac
aatggaggcgtcaatcaggatgaaaggaccgctgaggagagagacctggctgcagactcc
gagccggccacgctccaaatcagcgacagcaccacgctggactctgtagtacccggtaag
gccgccactgagggagaaaacaacaacaaccaggacaaaacatcactcagcaccaacgta
gtaatcgacgacatggacactgcaccaggactggagctctccaccattacagcagcgaac
agtaaagaactggaggcttcgaaatctgagaaggaagacgaggaagcggcgaatggttcg
agaactccgccagacagcatgttcatcttcaaacctcacaatccgatccgcagggcgtgt
cattatgtcgttaatctgcgttattttgaaatgtgtatcctgttggtcatcgctgcgagc
agcatcgctctggcggctgaagatcctgtggccacaaactcggactggaataaagtgctg
cgctacttcgattacgtcttcactggagttttcacttttgaaatgataattaagatgatc
gagcagggcctaatcctacatgatggttcttattttcgtgatctgtggaacgttctggat
ttcatcgtggtggttggagcgctggtggcatttgctcttacgaatgtactggggaataat
aaaggtagagacattaaaaccattaagtctctgcgagtgctgcgagttctccggcctctg
aagacgatcaaacgacttccaaaattaaaggcggtgtttgattgcgtggtcacgtctctg
aagaacgtctttaacatcctgatcgtctacaagctcttcatgttcatcttcgccgtcatc
gccgtgcagctcttcaagggcaagttcttctactgcaccgacggctccaaggacacggag
aaggactgccaaggttactacatcgactacaacaaggacaagaaggaggtgaagaagcgt
gagtggaagagacacgagttccactacgataatgtgatctgggcgttactcacactcttc
accgtgtctacaggagaaggctggcctcaagtcctccagcactcggtggacgtgacagac
gaggatcagggtccgagtcgagggaaccggatggagatgtccatcttctacgtcatttat
tttgtagtttttccttttttcttcgtcaacatctttgtcgctctcatcatcatcaccttc
caggagcagggagacaagatgatggaggagtgcagcctggagaagaacgagagggcgtgt
atcgactttgctatcagtgctaagccgctaacgcgctacatgccgcagaaccgccacacg
gtccagtatcgactctggcactttgtggtgtcgccctcgtttgagtacacagtgctgacc
atgatcacactcaacaccatcgtcctcatgatgaagtattattcggctcctcctgtatac
gacgccgtactgaagcacctcaacaccgccttcaccgtgctcttctccatcgagtgtgtt
ctcaagatcttggcattcggttttgtgaattatttcagagacacgtggaatatcttcgat
ttcatcaccgtcctggggagcatcacagaaattgtagtcgaccagcagtcagcttccttt
aacatgagctttttgaagctgttccgagcggctcggctcataaagctgctcagacagggg
tacaccatccgcatcctcctctggaccttcgtccagtccttcaaggcattgccatatgtg
tgtttgctcatcgccatgctcttcttcatctacgccattatcggcatgcaggtttttggg
aacatcaagctaaacgaggaaactcacatcaaccaacacaacaactttaaaaccttcttt
ggtgccttgatgttgctgtttaggagtgcgacgggcgagtcatggcaggaaatcatgctg
tcgtgtttaggaggtcaggactgtgaagccgacccgtctctcacgctgacctctgaccct
gacggaggatgtggcactgacttcgcgtacttctacttcgtctctttcatcttctttagc
tccttcctgatgttgaatttgtttgtggccgtgattatggataatttcgagtatttgaca
cgcgactcctccattcttggtcctcatcacctggacgagtttgtgaggatgtggggacaa
tacgaccgagcggcctgcggcaggattcactataaggacatgtacaaagtagtgcgcact
atatcgccccctctgggctttgggaagaactgcccccacagggtggcatgcaagaggctg
gtgctgatgaacatgccggtggacgcggagatgacggttcacttcacgtccactctgatg
gctctgatccgcactgcactggagatcaagatcgcacgaggcggagaagaccgtggacag
atggacattgagcttcagaaagagatcagcatcatttggccgcatctctcgcagaagtca
cttgatctgctcgttccaattaataaagcgagcgacatgacgatcgggaaaatctacgcc
gccatgatgatcatggattactacaaacagaacaaagctaaaaaactccgacagcagctg
gaggaacaaaaacacgccccgatgttccagcgcatggacgcctcgtcgttaccgcaggaa
atcctgtgcagcgctaaagctcttccgttcctcacacacagcgcagggaacgctctgacg
aggggcgggttcgtggcgttgagtcccatctctcctcaggagctcttcatgcagccggtc
acacccgagcagggggaggagccagaggaggaggaggaggaggaggagtacacaccccac
tacagaccgcagcactcacctgagacggtgacctccgagaacaaactgatgaagcgctcg
ttctccaccatcggagatcagtgtgtgaacggagtctggcaggaggagttctcgctggag
agagtgagtccggaccggctggagagaccgcgacagcgcagcttcagaggtgtcagggcg
aaccttagagagccgatgtgtaaggagagaggacgctcgaaggagaggaaacacctgctg
tcacctgatccatcacgctgcaactctgaggagagaaaccaaccgaggacacacgacacg
ccgcagacacacacacgctcaccgagcgaggggagaacacacacacagggcgacgcttca
gaaagcccacttgcctcctcctcctcggactccagagggcggcgccagcttcctccaacg
ccctccaggccccgcccacacatctcctattcacctctggtgtgccgcagccacctgacc
acagaggacggccaatcacggacgcagtcagccatagagggggtggggtctgtgataagc
cccgcctccccacagcgctacacctcggagccatatctgcctctgcacgacgactccaac
agtccagaggagatgctaacatttgaagctgccatagcaaccagtcgagggcgtggccat
gtcgttagctccgccccgcagttgcggcacacatggcagatgccaaacgggcatttccga
aaaggctgcgagctgctcagtgacacggacgaggacgaccgctgctaa
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