Clarias gariepinus (North African catfish): 128530010
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Entry
128530010 CDS
T10780
Symbol
iqsec2b
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 2 isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
cgar
Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128530010 (iqsec2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128530010 (iqsec2b)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
128530010 (iqsec2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
MYCBP_helical
LEKR1
Motif
Other DBs
NCBI-GeneID:
128530010
NCBI-ProteinID:
XP_053359660
LinkDB
All DBs
Position
9:complement(28845760..28919811)
Genome browser
AA seq
1495 aa
AA seq
DB search
MESNPDSPSRAVEYLLELNNIIENQAKLLETQRRRIEELETQLDRVNQENQDLRLDRKPG
TENSTQNHNHEQNLKSSGPSSLTNHNANNIHQNSNSNVPSSTVPGPARRTHTRLSRGLSC
GSAPVEKERGRLERNDSTGTNSTSTLRRHVDDETRAPESNPFSDSSKSPYQHRSDCYREG
SCGPPGSRGPVVGPPSPACLTWAQRTRNQPASLALRKQEEEENKRCKALSDSYELSTDLQ
DKKVEMLERKYGGYFLSRRAARTIQTAFRQYRMNKNFERLRSSASESRMTRRIILSNMRM
QYSFDERQPQPQPQSCHSPGMGPPHSPDLEPESPAQTEYTHLEDSFSKQVKSLADSIDDA
LACRPGRDDSQDGLGDSGAVDDFGECIWSSNSHPSLRRGLAERERGSTGGGLSMHEDSTA
TSYSDVTLYMDDGLPSSPLSLDRAPSSTDTEFWGGMTSGVGGREDSRDTEGGGSSNSRRS
TPCTECRDYRLRGAHLPLLTIEPPSDSSVDMSDRSDRGSLGRQLVYEQDSSGGSPQGTLK
HNPNAKAQGQARPASRPTAPHLPQHVTHHHHHHHHHHHHQYPDTPSSSSSPQQPPTTPLS
SSSSAQLPSGGLDQQCCSDGDNDSLNSTTNSNETINCSSGSSSRDSLREPLPPLGKQTYQ
RESRHSWDSPAFNNDVAQRRQYRIGLNLFNKKPEKGIQYLIERGFVSDTPVGIARFILER
KGLSRQMIGEFLGNRQKQFNKDVLDCVVDEMDFSGMDLDDALRKFQAQIKVQGEAQKVER
LIEAFSQRYCVCNPALVRQFQNPDTIFILAFAIILLNTDMYSPSVKPDRKMKLDDFIKNL
RGVDNGQDIPRDLLVGIYQRIQKWELRTNDDHVSQVQAVERVIVGKKPVLSLPHRRLVCC
CQLYEVPDPNRPQRTGVHQREVFLFNDLLVVTKIFQKKKTSVTYSFRQSFPLVEMQVHMF
QNSYYPHGVRLTSAIPGGERKVLIVFNAPSQPDRTRFVSDLRESIAEVQEMEKYRVESEL
EKQKGVMRPSLLSSTVVGGGVGGVKNEVVNGSIGRSSLDDNYSPSEGLKRTALSSSLRDL
SDSGKRGRRNSVGSLDSTMEVSLSGAEGSIISSPQPHQRYPVATVLSSCYGTEEYRPHRP
ILSPGVGVGGGPGQQHTTAPAPPGTVPPASSSSSSSERGATSGTTTSATSFLGSLFGTKR
AKAPGPIIPPGPPYPAPTVPALPPPLSPLPLCPQESIGTSKIQYCHTMGAGMAGHPPPPY
CHPHQRCQHGGPQRQHATLQRVTLPRRPTHNSSPYLPPLSQHVFQARFGNSGNGGSTCVP
PPPLSPHSPLSQLPSFTLCHAPLTHSVRGGAVVAKTPLALSHSQPHPHQHAHSHGHTPHP
AHPPHFVFASPPPPFPAPTPPPLPPSAQPAAAQHASPAAPYPPPYPPLSSIPPPPLHSPL
PPPSTPLTPLTPLSPLPPPSHPAPPPPQVTAPSPGQTGTADRVKSKPASRISTVV
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaacccagacagccccagccgggctgtggagtacctcctggagctcaataac
atcattgagaaccaggccaagctcctggagacgcaacggcggcgtatcgaagagctcgag
acgcagctcgaccgtgtcaaccaggagaaccaggacctccgcttggacagaaagcctgga
actgagaactccacccagaaccacaatcatgaacagaacttaaagtccagcggaccgtcg
tctttgacgaaccacaacgccaacaatatccaccaaaacagcaacagtaacgtaccatcg
tctacagttcctggcccagctcggcgcactcacaccaggctgagccgaggcctgtcgtgt
gggtcagctcctgtggagaaggagaggggaaggctagagaggaacgatagcactggaacc
aacagcacatctactctacggagacatgttgatgacgagactcgcgctccggagtcaaac
cccttctcagacagcagtaaatccccttatcaacatcgctctgactgctaccgggaagga
agctgtggccctccaggctcccgggggccagttgtgggccccccaagcccagcttgcctc
acctgggctcagcgcacccgtaaccagccggctagtctggccttgcgcaaacaggaggaa
gaggagaacaagaggtgcaaagctctttctgacagctatgagctttcaactgacctccag
gacaagaaggtggagatgctggagaggaaatacggtggctactttctaagcagacgagca
gcacggaccattcagactgccttccggcagtatcgcatgaacaagaactttgagcgcctg
cgcagctcagcttccgagagccgtatgacacggcgaatcatcctgtccaacatgcgcatg
cagtactcatttgacgagcgccagccacagcctcagccccagtcctgccacagccctggc
atgggccccccacattcacccgacctggagcctgagtcacctgcacaaacagaatatact
catttagaggattccttttctaaacaggtgaagtctctggctgattccattgatgatgca
ctagcatgccgtccaggtagagacgactcccaggatggccttggggatagtggtgctgta
gacgactttggtgagtgcatctggagcagcaacagtcacccatctctccgtcggggcctg
gctgagcgggagcgaggcagcacaggaggtggtctgagcatgcatgaggatagcacggct
acatcatacagcgatgtcactctctacatggatgatggtttgccctcatcacccctgtca
ttagaccgggcaccaagcagcacagacaccgaattctgggggggtatgacgagcggggtt
ggtggccgagaggacagcagggataccgagggaggtgggagcagcaatagcaggcgcagc
acgccgtgtacagagtgcagagattatcgcctccgaggggcacatttgcctctgctcaca
atagagccacccagtgacagttcggtggatatgagtgaccgttcagacaggggttcccta
ggccggcagctggtgtatgagcaggactcaagtgggggttcccctcagggcacactaaag
cacaatcccaatgccaaagcgcaaggccaagcccgtccagccagtcgcccaacagcacca
cacctcccgcaacatgtgacccaccaccaccaccatcatcaccaccatcatcatcaccag
tatcctgacactccatcatcttcctcctccccccagcagccccccactactccactctca
tcatcttcttccgcacaactgccttccggaggcttggatcagcagtgttgctcagatggt
gataatgactctctaaactccaccacaaactccaacgagaccattaactgcagctctggc
tcatcgtccagggacagcctgcgggaaccactgccgcctctgggcaagcagacataccag
agggaaagccgccacagttgggactctcctgctttcaacaatgatgtggcacagagaagg
cagtatcgcattggactcaaccttttcaacaagaaaccagagaagggcattcaatacctg
atcgagcggggctttgtgtcagacacgcctgttggcattgcccgttttattctagagagg
aaaggcctaagccgacagatgattggggagttcttgggcaaccgacagaagcagttcaac
aaggatgtactcgactgtgtggttgatgagatggacttttccggaatggatctagatgat
gctctacggaaatttcaagcccagatcaaagtgcaaggagaggcccaaaaagtggaacga
cttattgaggctttcagtcagagatactgtgtgtgtaaccctgcactggtgcgacagttc
cagaatcctgacactatcttcatccttgcttttgccatcatcctcctcaacacagacatg
tacagcccgagtgtcaaaccagacaggaagatgaagttggatgattttattaagaacctg
agaggagtagacaatggacaggatatcccacgtgacctattggtggggatctaccagcgc
attcagaagtgggaactgaggaccaatgatgaccatgtctcccaggtccaggctgtggag
agagtcatcgtgggcaagaaaccagtcctgtctcttccccaccgcaggctggtgtgctgc
tgccagctttatgaggtgcccgaccccaaccgaccacagcgcactggtgttcaccagaga
gaggtgttcctcttcaacgaccttttggtggtaacaaagatcttccagaagaagaaaaca
tctgtgacatacagtttccggcagtcattccctctggtggagatgcaagttcacatgttt
caaaactcctactaccctcatggtgtcaggctaacatcagcaatcccaggcggtgaacgt
aaggtgctaattgtgttcaatgcaccaagtcagccggaccgcacacgcttcgtcagtgat
ctgagagagagcattgctgaggtgcaggagatggagaaatacagagttgaatcggagctc
gagaagcaaaaaggcgtcatgcggcccagccttcttagcagcactgtggtgggtggaggg
gtgggcggagtcaagaatgaagtagtcaatggaagcattggaagatctagtttggacgac
aactattcacccagtgaaggcttgaaacgcactgctcttagctcctcacttagggacctg
tctgattcagggaaacgcggtcgaagaaacagcgttggttcccttgacagtacaatggaa
gtaagtctgagtggagcagagggttccatcattagcagtccacagcctcaccagcgttac
ccagtagccactgtgctatcgagctgctatggaaccgaagagtaccggcctcaccgcccc
atcctgagccccggagtgggggtggggggtgggccggggcagcaacacaccacggcgccc
gcgcctcctggcactgtacctccagcctccagcagcagcagcagcagcgagagaggtgca
accagtggaacaacgaccagcgccacatcgttcctgggatcactgtttgggacgaaacgg
gccaaagcaccaggccccatcatcccgccggggccaccttaccccgcccctacggtgcca
gcactaccaccgcctctttcccctttgcccctgtgccctcaagagtccattggcacatcc
aagatccagtactgccacactatgggtgcaggcatggctgggcacccgccaccaccgtac
tgccacccgcaccaacgttgccaacacggtggtccacagcgccagcatgccacactacag
cgagtcacactaccacgccgaccaacccacaactcttcaccctatctgccaccgctctcc
caacatgtttttcaggctcgcttcgggaattcgggcaatgggggctcgacgtgcgtcccc
cctccccccctttctcctcactccccactatcccaactcccatcgtttaccctttgccac
gcaccgctcacacactcggtcagagggggcgccgttgtggccaaaacgccgttagcgctg
tcacactcacaaccacacccgcaccaacacgcacactcccacgggcatacgccccaccct
gcccatccgccacacttcgtgttcgccagcccaccgccaccctttccagcgcccactccg
ccaccccttccaccctccgctcagcccgccgcggcccagcacgcgtcgccggccgccccg
tatccgcccccgtatcctccgctttcctccatcccacctccccccctccactccccttta
ccccccccttccaccccccttacccctcttacgcctctctcccctctcccccccccctcg
caccccgccccgccaccgccacaggtcacggcaccatcgccaggtcagactggcacggcc
gaccgggtcaaatccaagcctgccagccggatcagcacggtagtatga
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