Clarias gariepinus (North African catfish): 128530012
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Entry
128530012 CDS
T10780
Symbol
skia
Name
(RefSeq) v-ski avian sarcoma viral oncogene homolog a
KO
K26503
Ski oncogene
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128530012 (skia)
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
SPX
AAA_13
DUF3987
Motif
Other DBs
NCBI-GeneID:
128530012
NCBI-ProteinID:
XP_053359670
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Position
9:321444..356196
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AA seq
730 aa
AA seq
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MEAVTRPIFQPHPGLQQTLKQFHLSSMSSLGGPAAFSARWQHEVFGKDGEELERAAAASV
AAAAAAAAAAAHVPQPRPPPVLPVPLFMASDRSTERCETLLEGESISCFVVGGEKRLCLP
QILNTVLRDFSLQQINAVCDDLHIYCSRCTAEQLEILKVVGILPFSAPSCGLITKTDAER
LCNALVRTGSRSRAAKELEVKGFRVYHECFGKCAGIFVPELYTSPAAECIQCVECGVMHA
PHKFVVHGHKALENRTCHWGFDSANWRAYVLLSPEYAEKDENAKLEALLHVLKERFDFTS
KYKRRSSGVLDTVPIKKAKHDDFSHSPSAEKDKKPDWLRSLSASANKGFNCIQPRQRASA
FRPWSPNITDKDGAAKPASVPRDSFYNYKSLENSVAPNVALPPLQKGAPVSLSILSPASR
GGDERTEGHGKTRKRRITGEGHPGHAPSVHAQQSHALSRAPPMTEERDSDVEVEVRDEVT
SSLSSLSSPSFTSSSSAKELSSPGVAGVTGMAEFTAGAGSGAESQGGGASLDSELETLRQ
ALDGGMESRESKEKFLHEILKMRVKQEEKLGSALQAKRCLQQELEFLRVVKKEKLREASE
AKRALRKEMERLRAENERKIKEANETRARLTRELEEAKQLRKCDKACEAGRMRAKYSAQI
EELQMKLQLAEADREQLRSELQQEREARQHLERVVKDLQDQLWPKGEQDKHTELQTPAAP
SASSAKEPSN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgacgcggccgatcttccagcctcacccgggcctgcagcagaccctcaag
cagttccacctcagctccatgagctcgctcggcggccccgcggctttctccgcgcgctgg
cagcacgaggtgttcggtaaggacggggaggagctggagcgcgcggcggcggcctcggtg
gcggccgcggcggctgctgcggcggcggccgctcacgtgccccagcctcggcccccgccg
gtgctcccggtcccgctgttcatggcgagcgaccggagcacggagcgctgcgagaccctg
ctggagggggagagcatctcgtgcttcgtggtcggcggagagaagcgtctgtgtctgccg
cagatcctcaacacggtgctgcgcgacttctccctgcagcagatcaacgccgtgtgcgac
gacctgcacatctactgctcgcgctgcaccgccgagcagctggagatcctgaaggtggtg
ggcatcctgccgttctccgcgccgtcctgcggcctgatcaccaagaccgacgccgagcgc
ctgtgcaacgcgctggtgaggacgggctcgcgctcccgggccgccaaggagctggaggtg
aagggcttccgggtgtaccacgagtgcttcgggaagtgcgcggggatcttcgtgcccgag
ctgtacaccagccccgcggccgagtgcatccagtgcgtggagtgcggcgtgatgcacgcg
ccgcacaagttcgtggtgcacgggcacaaggccctggagaaccggacttgccactggggc
ttcgactcggccaactggagagcctacgtcctcctgagtcccgagtacgccgagaaggac
gagaacgccaagctggaggccctgctgcacgtgctcaaggagaggttcgacttcaccagc
aagtacaagaggagatcctcaggggtcctggacacagttcctattaaaaaggcgaagcat
gatgatttctctcactcgccctcagcagaaaaagacaagaaacctgattggctgcgatcc
ctctcagcctcagccaataagggttttaattgcattcagccccgacagagagcgtccgcg
ttcaggccctggtccccaaacatcacagacaaggacggagccgcaaaaccagctagtgtg
ccgagggacagtttttataattataagtctctggagaactcggtggctccgaacgtggct
ctgcctccactgcagaagggggcgccagtgtctctgtccatcctgagccctgcaagccgc
ggaggtgacgagcgcactgagggacacggcaagaccaggaagaggaggatcacaggcgag
ggtcacccgggacacgccccctctgtccacgcccaacagagccacgccctttctcgagca
cctccaatgacagaggagcgtgactcagacgtggaggtcgaggttcgagacgaagtgacc
tcctcgctgtcgtctctttcatctccttcgttcacgtcctccagctccgcgaaggagctc
agctctccaggtgtcgcaggggtcacgggcatggccgagttcacggcaggtgcagggtct
ggagcagagagccagggaggcggagcttctctggactctgagctggagacgctgagacag
gcgctggacggagggatggagtctcgcgagtccaaggagaagttcctgcatgagatcctg
aagatgagggtaaagcaggaggagaagcttggctcggctctgcaggccaagcgctgcctc
cagcaggaactggagtttttgcgtgtggtgaagaaggagaagctgcgtgaagcgagtgag
gctaagcgcgctctgcgtaaagagatggagcgattgcgagcggagaacgagaggaagata
aaggaagcgaacgagactcgagctcgactcacccgcgagctggaggaggccaagcagcta
cgcaagtgcgacaaagcgtgcgaggcgggacgcatgcgcgccaaatactccgctcagatc
gaggagctgcagatgaagctccagctggccgaggcagaccgtgagcagctccgctcggag
ctccagcaggaacgtgaagcacgtcagcacctcgagagggtcgtcaaagatctgcaggat
cagctgtggcccaaaggcgagcaggacaaacacacggagctccaaacaccagcagcccca
tctgcttcaagtgctaaagagcccagcaattaa
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