Clarias gariepinus (North African catfish): 128530064
Help
Entry
128530064 CDS
T10780
Symbol
mib2
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128530064 (mib2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128530064 (mib2)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128530064 (mib2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIB_HERC2
SH3_15
Ank_2
Ank
Ank_5
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
ANK_LRRK2
CUB_A2MG
Sina_RING
Motif
Other DBs
NCBI-GeneID:
128530064
NCBI-ProteinID:
XP_053359747
LinkDB
All DBs
Position
9:26156398..26238498
Genome browser
AA seq
1026 aa
AA seq
DB search
MSKRKLNHKGCSELRVMWFTPDLSPESPLLGTLPLPPSRSRTSGPSSGPTTHPPAEPPAR
PHRKRSGEAGSGSASPPVRGAMEVGMRVVRGVDWKWGNQDDGEGHVGTVVEVGRQGSTST
PDKTVVVQWDSGTRTNYRTGYQGAYDLLLYDNAQIGVRHSNIICDSCKKHGIMGMRWKCK
VCFDYDLCTHCYMNNKHDLSHAFERYETAHSQPVSLAPRQNLSRIILKGIFQGVKVVRGP
DWDWGNQDGGEGKIGKVVDIRGWDQESGRSVASVTWSNGTTNVYRMGHKGKVDLKYVSDG
QGGYYYKEHLPKLGEHAELQRQESADGHTFQQGDKVKCLLEVDILRQMQEGHGGWNPKMA
EYICRIGTVHRITDRGDVRVQYSNNIRWTFHPGALTKVNTFAVGELVRVLDDIETVKRLQ
DGHGEWTDSMAPALGQVGKVLKVYADGDLRVAFGGQTWTFNPACLSAQPGEVDANLMTAE
NPSESRTTVISVLEKLLSQSTEQDNPGRLVIEAAHGSAAKVRELVQKHPDKVDIKNQGKT
ALQVAAHQGHMEVVKVLLQANSNIEAKDEDGDAALHYTAFGNQAEIARLLLSKGVSVNLL
NNSMCTALHIAVNKGFTDVVRVLTEHSADVNLQDSYGDTPLHDAIAKDFRSIIEILIVVR
NIDFTQQNNRGFNLLHHAALKGNKLATEMILARARQLADVKKEDGFSALHLAALNNHYDV
AEILIKEGRCDVNIRNNRGQTPLQLAVTQGHMQLVELLVMEGANVNAEDEEGDTAMHTAL
SRQQLTTTLSSTERDASNLYTRLSGSGLLGNTELNVGAAIACFLAQEGADINYANHKGKS
PLDLVTDSIILQLIRSFSEKYRLQAGTCGTGGSGSSSLRRVHTTPNTMTNLVMPSAPGPS
ECLICSELALLVLFAPCQHSVACEECAHRMKKCIKCQVTITKKIRQDQTEVDSSPNSESS
EQHHLLEQLQSRYRQMEERITCPICIDNQIKLVFQCGHASCMECSSALKTCPICRQSIRE
RIQLFV
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacggaaattgaaccacaaaggatgctcagagttgagggtgatgtggttcacc
cctgacctgtctcctgagagccctctactcggcacccttccgctgccaccatctcgctca
cgcactagcggccccagcagcggccccaccacccatcctcccgccgagccgcctgcgcga
ccacaccggaagcgcagcggcgaggccggaagcggcagcgctagcccacctgtccgtggc
gccatggaggtgggtatgcgcgtggtgcgtggggttgactggaagtggggcaatcaggac
gacggcgagggccacgtgggcacagtcgtggaagtggggcgccagggcagcaccagcaca
cctgacaagacagtagtggtgcaatgggacagtggcactcgaaccaactaccgcaccggc
taccagggtgcctacgacctgctgctttacgacaacgcacagatcggtgtccggcactcg
aacatcatctgcgacagctgtaagaagcacggcatcatgggaatgcgttggaaatgcaag
gtgtgcttcgactacgatctgtgcacgcattgctacatgaacaacaaacacgacctctcg
cacgccttcgagcgctacgaaacagcgcactcgcagccggtcagcttggcaccaaggcaa
aacctgtcacggattatacttaagggaatcttccagggtgtaaaagttgtgcgtggaccc
gactgggattggggcaaccaagacggaggagaggggaagatcgggaaggtggttgatatc
cgaggttgggaccaggagtcgggacgcagcgtggccagtgtcacctggtccaacggcacc
accaacgtctacaggatgggtcacaagggcaaggtggacctcaaatacgtctcagatggc
caaggaggttattactacaaggagcacctgcccaaactaggtgagcatgcagaactgcag
aggcaggagagcgctgatggtcacacattccagcagggggataaggtaaaatgcctgctg
gaagtagacatcctcaggcagatgcaggagggacacggaggctggaatcctaaaatggca
gagtacatctgcagaatcgggactgtacacaggataacagaccgaggggacgtcagagtc
caatacagtaacaatatacgctggactttccatccaggcgctctgactaaagtgaacacg
tttgcagtgggtgagttggtgagggtactggatgacatcgagactgtgaagaggctgcaa
gatggccatggagagtggaccgacagcatggcacctgccctgggccaggtcggcaaggtt
ttgaaagtatatgcagatggtgacctgcgtgtagcgtttggaggacaaacgtggactttt
aaccctgcgtgtctctcggctcagcctggcgaagtggacgccaatctgatgacagccgag
aacccgagtgaatccagaaccacagtcatttcagtcctggagaagctgttgtctcagtct
acggagcaggacaacccaggacgtctggtcatcgaggctgctcacggcagcgctgctaaa
gtccgagaacttgtccagaaacatccggataaggtggatataaagaaccaggggaagacg
gctctccaggtggctgctcaccagggccatatggaagtagtgaaggtcctgctgcaggcc
aacagtaacattgaagccaaggatgaagacggagatgcagcgctgcactacactgcattc
gggaaccaagcagaaatcgcccgcctcctcctgagcaaaggggtcagcgtcaacttgctg
aacaactccatgtgtacggctctgcatatcgcagtcaacaagggcttcacggacgtagtg
agggtactgaccgagcactctgccgacgtcaacctgcaggactcgtacggggacacacct
ctgcatgatgccatcgctaaggacttccggagcatcatcgagatcctgatcgtggtgcgc
aatattgactttacgcagcagaacaaccgtggctttaatctgctgcaccatgccgccctg
aaaggcaacaaacttgcgacagagatgatcctggcgcgtgcccggcagctggccgatgtg
aagaaggaagacggcttctctgctcttcacctggccgctctcaataaccactacgatgtg
gccgagatcctcatcaaagagggacgctgcgacgtcaacatccggaacaaccggggtcag
acgcccctgcagctggcggtcactcagggccacatgcagctggtggagcttctagtgatg
gagggagccaacgtgaatgcggaggatgaggagggagacacggccatgcacacggccctc
agccgccaacagctcaccaccaccctgagcagcacagagagagatgcctcaaacctctac
acccgattgagcggctcggggctgctggggaacactgagctaaatgtcggggctgccatc
gcctgttttctggctcaagagggtgctgatataaactacgccaaccataaaggcaagagt
ccactggacttggtgaccgatagcatcatcttacagctgatcaggagcttctccgagaaa
taccgtctgcaggctggtacatgtgggacgggcgggagcgggagcagcagcctgaggcgg
gtccacacaacgcccaacaccatgaccaacctcgtcatgcccagcgcaccaggcccgagc
gagtgcctcatctgttccgagctcgccctgcttgtgctcttcgccccatgccagcacagc
gtcgcctgcgaagaatgtgctcacagaatgaagaaatgcattaaatgccaggtcacgatc
accaagaaaatacgacaagaccagacagaggtagacagcagtccgaactcggagagctca
gaacagcaccacctgctggagcagctgcagtcacgctacaggcagatggaggagcgcatc
acttgccccatctgcatcgacaaccagatcaagctcgtgtttcagtgcggccacgcctcc
tgcatggagtgcagctccgctctcaaaacctgtcccatatgccggcagagcatccgagag
aggatccagctcttcgtttga
DBGET
integrated database retrieval system
