Clarias gariepinus (North African catfish): 128530099
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Entry
128530099 CDS
T10780
Symbol
loxhd1b
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128530099 (loxhd1b)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Other domain-containing proteins
Others
128530099 (loxhd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128530099
NCBI-ProteinID:
XP_053359794
LinkDB
All DBs
Position
9:19265968..19288879
Genome browser
AA seq
2294 aa
AA seq
DB search
MVNINEANEDEAEDETVKYTKANIRSTQGGIMGSKDKKSKEEGKKKKKAEKEEQEEEEDE
EDDDSQKKKKKKKAKKGFTDSDDEGKKGKGKKKKKTVDYVEIYENELRNYELDKVENYED
EYHKKKVYEVVTITGEVAGAGTDANVFVTLFGDYGITPKVLLASNTEKRNRTAFEKGKTD
VFRIKTHNVGVLRKIRIEHDNTGLSASWFLDRVMVTDMNRPHQRYYFACNNWLSRKEGDG
LITRDLLGTVDSSDMPKYNKYVVSVITADVKGSGTDADVFLNIFGEYGDTGERRLDSDKN
NFERGAEDKFTIDAPNLGKIRKITIGHNNKGSSAGWFVDKVVVDDLGNKAVYEFPVARWF
ALDEDDGKIQRDILVGGSQPTGIVYNIQVVTGNIRGAGTNSKIHIVMHGTKGLKNSGKIF
LEGGIFERARTDIFNIEIAALLSPLSRITIGHDNDGVSAGWYCDKVVIYCPFTGLEQTFP
CSKWLDEDEGDGLIEREIYEMVSLRQKRQKKYPWSLWIWTSDLSGAGTDASIVLQIYGEM
GKSDEMKLDNKTNNFEQGQLDKFMIELPDLGRLKKLRIFHEKRNPFAGWHLSQVTLLKTL
TKEKYKFPCNRWLDTSEDDNEVVRELPATGDLIQEPLPVIKYRVTVYTGNVSGSGTDATV
FLCLLGDLGDTGDRVLVNCKNNVNKFEKGNGDEFIIEAVSIGQVRRVRIGHDGRGGGCGW
FLDKVVVREEGQAESEAAEFPCNRWLDRNEDDGQIVRELVPFADGQKLYNTSIHIEVKTG
DINGASSDSKVFVKLYGEKGDTSKMMLVVSTNDLRNYFETGRVDIFTVETFDIGQINRML
IGHTNEGMRAGWFLDSVQIKVPNQGKHYMFPSHRWLSEDEADGKTEVELYPSEILDIEKL
INYEVTVVTGDVWAGGTNASVFIQIYGEEGKTELITLKSRSNNFERGVTEIFKIEAKDVG
NIFKIRIGHDGSGIGSGWYLEKVDLKYLVMAMVKKEKKEDKKKNKKKKKKEDEENDEGEE
VMQEVVKTLTFQCDRWLAEDEEDGELIVELLPEDNEELEENTYEVSVFTGNMWGAGTDAN
VYINFYGENGDTGERPLKKSNHLNKFERGQEDVFTIKAVELGTLKKLRIHHDNSYANSAW
YLDRVEIVDTKDDTTYYFPCNRWLAVDEDDGQLVRELVPVDEAFMKKNDDEEELGATLGL
EQKAMSTTYTLRIKTGEKKYAGTDANVFAVLYGEYDDTGIINLKASKTHKNKFEQGNIDE
FIVEAVNLGELKRIRIGHDNSGGSGWFLDWVEINAPSQGLKLCFPCGRWLDKGKDDGALA
RDLYPAELQTEVYTPFVPYEIKTFTSDLFGAGTDADVFIVLYGENGVCTHQKYLCVNKRE
RRMYFERGAEDMFIVELEDVGDVIEKIRIGHDNRGINPGWHLDRVEIRRLLRKGKGSETT
IFPCERWLAKSEDDGETVRELVPSDIIIERLLRDGTLKCTETEVEDALETHTYDVSVRTG
DMYGAGTDANVFLTIYGELGDTGERKLSKSETNSNKFKRGAVDKFSIEAVDLGQVFKIKI
RHDNSMMGADWYLEQIEIVDTDTDEISMFLCERWLSKKKEDKRIERTFYVKGFEGERNPQ
NSKPSLDSNMNKKKKKKKSVVEETAVIPYHFTVSTGSDRDASTTSRVFVIIIGANDSETD
RLWLDLPEGRKCFAAETMEHFECYGLDVGEIKRVELGHNGATPESCWLVEEVAVAVPTKG
IKYIFQCNCWLAKDRGDGLTSRVFNILDAITINIIQKVVYEITVVTGDTQYAGTDTNIFI
TVFGASGSTEEILLPKKEDRFERDQKDTFNLEIDDIAPLKKLRVRIDGTGCRPDWFLDQI
IMRNPITEEVSVFTYEDWLYKTKGPKRTKVCELPAVVDDEEMVEKTTYIIQVKTSDISGA
GTDANVFMIVFGENGDTGTLALKESSNRNKFERNQVDVFHFSDILSLGELCKIRVWHDNK
GPAPGWHLENIDVKDELMSQTFRFPCDRWLAKSEDDGQIIRELGCANNDILDLSDKTKYI
IDITTANYEGAGTKENVCIVLEGKRARSKEFMMENSSKKKRFVWGATDTFEFSSKLLGDI
VTISLVHITKDKKVKNDAYWHVEEVVVTEQELGNKYFFHCDAQIPLTTKKGEFVTFECIK
CVESFASKVRSLVPIKYEIIIITGDVKGAGTDANVFITIYGVNGDSGKRPLKQKFRNLFE
RGRTDRFLLEMLDLGDLLRVNVEHDNTGQAPGWYLECVEITNTANWVTTIFVCGKWMDRT
RADGQIERVLFPRY
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatattaatgaggccaatgaagatgaagcagaggatgagacggtgaagtacacc
aaagccaacataaggagtacacaagggggaattatggggtcaaaagataagaagtccaaa
gaggaaggtaaaaaaaagaagaaagccgagaaggaagagcaagaagaagaagaagacgaa
gaagatgatgactcgcaaaaaaagaaaaagaaaaagaaagctaagaaaggtttcacagac
agcgatgatgagggtaaaaaaggtaaaggaaagaaaaagaaaaagactgttgactatgtt
gagatctatgagaatgagttaaggaactatgaactggacaaagtggaaaactatgaagat
gaataccataaaaagaaagtttatgaggtggtcaccattactggagaagtagctggggca
gggacagatgctaatgtatttgttactctttttggtgattatggcataactccaaaggtg
cttcttgccagcaacactgaaaagagaaaccggactgcttttgagaaaggcaaaacagat
gttttccgaataaaaactcacaatgttggagtattacgaaaaattaggattgaacatgat
aatacaggcctaagcgctagctggttcttggaccgtgtgatggtgactgacatgaacagg
ccccatcaacgatattactttgcctgcaacaactggctcagcaggaaggagggtgatggg
ctcattacacgagatctgctggggaccgtagactcctctgacatgccaaaatataataag
tatgtagtgagtgtcatcactgcagatgtcaaaggtagtggaacagacgcagatgtattc
cttaatatttttggtgaatatggagataccggggaaagaagacttgacagtgataaaaac
aactttgagagaggagcagaagacaagtttactattgatgcaccaaacctgggtaaaata
aggaagatcaccattggccacaacaacaaaggctcctcagctggatggtttgtggacaag
gtggtagtggatgacctgggaaacaaggcagtgtatgagtttcctgttgcccgctggttt
gccctagatgaagatgatggaaagattcaaagggatattttggtgggggggagtcagccc
acaggcattgtttacaatatacaggtggttacaggaaacatcaggggagcaggtacaaac
tccaaaatccacatagtcatgcatggcaccaagggcttaaagaacagtggaaagatcttt
ctggagggtggcatatttgaacgtgcacgcactgacatctttaacatagaaatcgcggct
ttgctaagtcctcttagtcgcataactattggccatgataatgatggcgtcagtgcaggc
tggtactgtgataaggtagtaatctattgccctttcactgggcttgagcagacattccct
tgttctaagtggctggatgaggatgaaggagatggcctaattgagagagagatttatgaa
atggtctcactccgacaaaaaagacaaaagaagtatccatggtctttgtggatttggacg
tctgatctttctggtgcaggcacagatgcttctattgtcctacagatctatggagagatg
ggcaagtctgatgagatgaagttggacaacaagactaacaattttgaacagggtcagctt
gataaatttatgattgaattacctgatcttggaagattgaagaaattgagaatatttcat
gagaagagaaatccatttgcaggatggcatttaagccaggtgacacttttgaaaacatta
acaaaagagaaatacaaatttccctgtaatcgctggctagatacaagtgaagatgacaat
gaagtagtaagggagcttcctgcaactggagatcttatccaggagccactaccagttata
aaatacagagttactgtttacactggaaatgtaagtggaagtgggacagatgccacagtc
ttcttatgcctcttaggagatttaggagacacaggtgaccgcgtcttagtaaactgcaag
aataatgtcaacaagtttgagaaaggcaatggtgatgagttcataattgaggctgtgtca
atagggcaggtacgcagggtaaggattggccatgatggacgagggggtggttgtggctgg
tttctagacaaagtggtggtcagagaagaaggacaggctgagtctgaggctgcagagttc
ccatgtaacagatggcttgaccgtaatgaggatgatggccagattgttcgagagttagtt
ccatttgctgacggacaaaaactctataacaccagtattcatattgaagtaaagacaggt
gacatcaatggtgccagctcagactcaaaggtcttcgtgaagctttatggtgagaaaggt
gacactagtaaaatgatgctggttgtttcgacgaatgacctgcggaactacttcgaaact
ggccgggtcgatatcttcaccgttgagacttttgacattgggcaaatcaaccgtatgctg
attggtcacaccaacgaaggcatgagggcaggctggtttctggacagtgtgcaaatcaag
gtgccaaaccagggcaaacactacatgtttcccagccatcgctggctgtctgaagatgag
gctgatggcaaaactgaagtagagctctacccaagtgaaatacttgatattgaaaaatta
ataaactatgaggttactgtggtaacaggtgatgtttgggctggaggaaccaatgccagt
gttttcatccagatatatggagaggaaggaaaaacagaacttatcaccctgaaaagcaga
tccaacaactttgaaagaggtgtcactgaaatatttaagattgaagctaaagatgtggga
aatatcttcaaaattcgtattggccatgatggctcaggaattggttctgggtggtactta
gaaaaagtagacttaaaatatctggttatggccatggtgaagaaagagaagaaagaagac
aagaagaaaaataagaagaagaaaaagaaggaggatgaagaaaatgatgagggtgaggaa
gtgatgcaggaagtagtgaagacactaacctttcaatgtgatcgttggcttgctgaggat
gaggaagatggggaattgatagtagaacttctgcctgaggacaatgaagagttagaggaa
aatacatatgaagtcagcgtgtttactgggaacatgtggggtgcaggaactgatgccaac
gtgtacatcaatttctatggcgagaatggtgacactggagaacgtcccctgaagaaatct
aaccacctaaacaaatttgagcgtggtcaggaagacgtgtttacaataaaagcagttgaa
ctagggactctgaagaagctaaggatccatcatgacaacagctatgccaactccgcctgg
tacctagaccgagttgagattgtagatacaaaagatgacaccacgtactacttcccctgt
aaccgctggttggctgttgatgaggatgatggccagcttgtcagagagctggtgcctgta
gatgaagctttcatgaaaaagaatgatgacgaggaagagttgggagccaccttaggcctg
gagcagaaagctatgtcaacaacatacacattgaggattaagacaggagagaaaaaatat
gctggaacagatgccaatgtttttgcagttctgtatggagagtatgatgatacaggaatt
attaacctgaaagccagcaaaacacacaagaataagtttgagcaaggaaacattgatgag
tttattgtggaagctgttaatcttggagagcttaaaaggatcagaatagggcatgacaat
tctgggggctcaggttggtttttggattgggtagagattaatgccccttctcagggtctg
aaactctgttttccatgtggccgctggctggacaaaggaaaagatgatggggcattagca
agagatttgtacccagctgaattgcagacagaggtgtacacaccatttgtgccctatgag
attaaaacctttactagtgatctgtttggagcaggaacagatgcagatgtctttattgtt
ctttatggtgaaaatggggtctgcactcaccaaaagtatctctgtgtaaataagagagag
cggcgcatgtactttgagagaggagcagaggacatgttcattgtggaactggaagatgtc
ggtgatgtcattgagaagatccgcattggacatgacaacagaggcataaaccctgggtgg
catcttgatcgtgtagagattagaaggcttttaaggaaaggaaagggatctgagactaca
attttcccatgtgagagatggctcgcaaagtctgaagatgacggtgagacagtgagagag
ctggtaccttcagacatcatcatagagaggctcctgagagatggtactctgaaatgcact
gagactgaagtggaagatgcattggaaactcacacatatgacgtatctgtaagaacaggt
gatatgtatggagcaggtacagatgctaatgtgttcctgaccatctatggagaacttgga
gacacaggagaacgcaaactcagcaaatcagagaccaacagtaataagtttaagagagga
gcagttgataaattcagcattgaagctgtagaccttgggcaagtttttaagatcaaaata
cggcatgacaattctatgatgggagcagactggtatctagagcagatagaaattgtggat
acagatacagatgaaatctccatgttcttatgtgaaaggtggctttcaaaaaagaaggaa
gataaaaggattgaaagaacattttatgtcaagggatttgaaggtgaaaggaatccccaa
aattctaagccaagcctagacagcaacatgaacaagaagaaaaagaagaagaaatcagtt
gtcgaggagactgctgtgatcccatatcactttacggtgtcgacaggatcagaccgtgat
gctagtaccaccagtcgagtgtttgtaatcatcataggtgcaaatgattctgaaacagac
agactctggctcgaccttcctgaaggaagaaaatgctttgctgctgaaactatggaacac
tttgaatgttatgggttggatgtaggagaaatcaaaagagtcgagttaggccataatggt
gctactccagaaagctgttggctggtggaggaagtggctgttgcagttcctaccaaaggc
atcaagtatatattccagtgtaactgctggcttgccaaagatagaggggatggcctgaca
tcaagagtgttcaatatacttgatgccatcactattaatatcattcaaaaggttgtctat
gagattacagttgtaacaggagacactcagtatgcagggacagacaccaacatatttata
actgtattcggggccagtgggagcacagaggagattttgttaccaaagaaagaggacagg
tttgagagagatcagaaggacacttttaatttggagatagatgacattgctccactaaaa
aagttaagagttcgcattgatgggacaggatgccggcctgattggttccttgaccagatt
atcatgaggaacccaatcactgaggaagtgtcggttttcacctatgaggactggctttac
aaaacgaaagggccaaagaggacgaaggtctgtgagctccctgcagtggtggacgatgag
gagatggtggagaaaaccacttatattattcaggttaaaaccagtgacatttctggtgca
ggtacagacgctaatgtgttcatgattgtgtttggagagaatggggatacaggcacccta
gcactgaaagaatccagcaacaggaacaaatttgaacgcaatcaggtggatgtgttccat
ttttcagacatcctcagcctgggagagctttgcaagatccgagtatggcatgacaataag
ggtcctgctcctggctggcacttagaaaacattgatgtaaaagatgagctcatgagccaa
acctttcgattcccttgtgaccgctggctggccaaaagtgaggatgatggccagattatt
cgggaactgggctgtgccaacaatgatatcctggacctcagtgacaaaaccaaatacatt
attgacattaccacagccaactatgaaggtgcagggacaaaggagaacgtgtgcatagtg
cttgagggcaaaagagcacgttcaaaggagtttatgatggaaaattcttcaaagaaaaag
agatttgtgtggggtgctactgacacatttgaattttcctccaaacttcttggagatata
gttaccatctctttggtccatataacaaaagataaaaaagtgaagaatgacgcttactgg
catgttgaggaggtggtagtgacagaacaagagttggggaacaagtacttttttcactgt
gatgcccagatccctcttactacaaagaaaggcgagtttgtgacatttgagtgcattaag
tgtgttgaaagctttgccagcaaagtgcgcagcttggttcccatcaagtatgagattatc
atcatcacaggtgatgtgaaaggagctgggactgatgccaatgtcttcattaccatttac
ggtgtaaacggagactcagggaagcgtccattaaagcaaaagtttaggaacctgtttgag
aggggccgtacagaccgctttttgttggagatgctggacttgggcgatctcctaagagtc
aacgttgagcatgacaacactggccaagcaccaggctggtacttggagtgtgtagagatt
acaaacactgccaactgggtgaccacaatctttgtttgtggaaagtggatggataggaca
agagcagatggacaaatcgaaagagtcttgttccccagatactga
DBGET
integrated database retrieval system
