Clarias gariepinus (North African catfish): 128530110
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Entry
128530110 CDS
T10780
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128530110 (ybx1)
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128530110 (ybx1)
03041 Spliceosome [BR:
cgar03041
]
128530110 (ybx1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
128530110 (ybx1)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128530110 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
128530110 (ybx1)
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
General mRNP proteins
128530110 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
128530110
NCBI-ProteinID:
XP_053359808
LinkDB
All DBs
Position
9:27333645..27338845
Genome browser
AA seq
305 aa
AA seq
DB search
MSSEAETQQPPQPAADVESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA
DRNRYRRYPRRRGPPRDYQDNYPSDGEGDKKEAGDSAGEGDQQQRKPSFPGRRRYPPYYV
RRRYGRRPPYTNAPPRGEMTEGGEGEENQGGQDQGNKPVRQNYYRGYRPRGPPRPRPVRE
GEEDKENQGEAGQNQEPRQRRYRRNFNYRRRRPQSTKPQDGKDSKAADSSTDKSAAPEAE
QGGNE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgaaacacagcagccgccgcagcctgccgccgacgtggagagccca
tccagcccggcagccgcagctaccgcgggggataagaaggtcatcgcaacaaaggtcctg
gggacagtgaagtggttcaatgtaagaaatggctatggtttcatcaacaggaatgacaca
aaagaagacgtctttgtacatcagactgcgataaagaagaacaacccaaggaaatatctg
cgcagtgtcggggatggagagactgtggagtttgatgtggttgaaggagaaaagggtgcc
gaggcagccaatgttaccggaccaggtggcgtgcctgtgcaaggcagcaaatatgcggct
gacaggaaccgatacagacgctatccacgcaggaggggtcctccacgtgactaccaggac
aactacccaagtgatggagagggagacaagaaggaggcaggggacagtgctggtgaaggc
gatcagcaacagcgtaaacccagctttcctggcagaagacgctaccccccatactatgtg
agaagacgctatggccgcagacccccttataccaacgctcctcccaggggagagatgact
gagggtggggaaggtgaggagaaccaaggtggtcaggaccagggcaataaaccagtgagg
cagaactactacagaggctaccgaccaaggggcccacctcgacccagacctgtacgggaa
ggggaggaggataaggagaaccagggagaggctggtcagaatcaggagccacggcagcgc
cgctaccgccgcaacttcaactaccgccgcagacggcctcagagcaccaagccccaggac
ggcaaggacagcaaggcagccgattcatcaaccgacaaatcagccgctcccgaggctgaa
caaggcgggaacgagtag
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integrated database retrieval system
