Clarias gariepinus (North African catfish): 128530168
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Entry
128530168 CDS
T10780
Symbol
rnf165b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128530168 (rnf165b)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128530168 (rnf165b)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128530168 (rnf165b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-RING_Vps41
zf-ANAPC11
zf-RING_16
Prok-RING_4
zf-RING_4
RINGv
zf-Nse
zf-RING_10
zf-RING-like
DUF7856
Motif
Other DBs
NCBI-GeneID:
128530168
NCBI-ProteinID:
XP_053359893
LinkDB
All DBs
Position
9:complement(19291598..19301431)
Genome browser
AA seq
352 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGSQFNRHQHSHATSCRHFQVGPQAQIPVDFPMPHPGQSQA
GINPHLGPTHQPAAPLHPPLGHIPAPQFQDIQGPPFLPQALHQQYLIQQQILEAQQRRFL
PQPSRHGQERTAHHAQTIRPPYEYPPSIHVPPPPPVPQQPRYLAEGTDWDLSVDPGLPHS
HYHVPQLPQHYQHYLASPRLHHFPRNASSAQVVVHEIRNYPYPQLHLLTLQGLNPSRHAT
AVRESYEELLQLEDRLGNVNRGAVQTTIERFTFPHKYKKRRPLELKIGMDEDELDTDEKC
TICLSMLEDGEDVRRLPCMHLFHQACVDQWLATNKKCPICRVDIETQLTPDS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtacacgttggatacctggttctacccgttttcggctcagtaagaaataga
ggatctcagtttaacaggcatcagcatagccatgctacctcttgccggcatttccaagta
gggccccaggcccagatccctgttgacttcccaatgccccatccaggacaatctcaggcg
ggcataaacccgcaccttggcccaacacaccagccagctgccccgttgcatcctcccctt
ggccacataccagcaccacagttccaggacatccaaggcccccccttcctacctcaggct
ttacaccagcaatacctcatccagcagcagatcctggaggcacagcagaggaggttcctt
ccacagcccagcagacatggccaagagagaacagcacaccatgcccagacgatccgtccc
ccctatgaataccccccttccatacatgttcctccccctccacctgtgccacagcagcca
cgctatcttgctgaaggaacagactgggacttgagtgtggaccctggtctacctcattca
cactaccatgtccctcagctgccgcagcactatcagcactacctggcctctccaaggctg
caccactttcccagaaatgcatcttcagcacaagtggttgtccatgagatcagaaactac
ccttatccacagttacatctattaaccctgcagggcctcaatccctcccgccatgccacc
gctgtgagggaaagctatgaggaactcttacagctggaagacaggcttggtaatgtgaat
cggggggctgtgcagactaccattgagaggtttacctttcctcataaatacaaaaagaga
agaccactggagcttaaaatagggatggatgaagatgaactggacacagatgagaagtgt
acgatttgcctgtcgatgcttgaggatggagaggatgtgaggagattaccctgcatgcac
ctcttccatcaggcttgtgttgaccagtggcttgcaaccaataagaagtgtccaatttgc
agggtggacattgagacccagctgactccagacagctga
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