Clarias gariepinus (North African catfish): 128530219
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Entry
128530219 CDS
T10780
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
128530219 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
128530219
NCBI-ProteinID:
XP_053359978
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All DBs
Position
9:1760078..1772712
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AA seq
1188 aa
AA seq
DB search
MAKIQAHSSTKHITPLQEKAFTAQKHQQHFQKLKVEDALSYLDQVKIRFANDPGIYNKFL
DIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSPFSP
QQVSPGKAKSTESSSAQSETVASPQSTSPSSGVPPDPPGRLALPLPSQSQPATSSASPPA
SEASPVEFDSAISYVNKIKSRFLDHPEIYRSFLEILHTYQKEQLELKENRSRTSTGMTED
EVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTSGSLTGKEPVKKTDEEELNKQPKKRPR
PLLLPHMTPLLKKKMKFSCSKEPSFASVGKHGVLREFTFFDKVRRLFKSQEVYENFLRCI
ALFNQEVVSGAELLQLVTPFLGKFPELYSQFKSFLGEKELSHSVSGLSERYMEGGGAREV
DYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSKKTPYE
EQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPEDQDRFRLDDCLGGTSEVIQR
RAVYRIYGDKAPEIIEGLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYL
KSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGGVGQQSREGGRSSSEPHL
IFSYEDKQILEDAASLIIYHVKRQPTIHKEDKDQIKRIIHHFIPDLFFSRRGELSDTEEW
TDEEAETEDGGGVAAGAASDVQTAAVAMSERGGGGGDLAGSPGSQQQVNGESRRRRCASP
RGAEQQEQLEQQKEQDGIYNLFFVNNNWYFFLRLHQTLCSRLLKVYRQAERQLLEHRAEQ
SAERLLVAEGRRDKATDLAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTL
REMFTIHAYIGFTIDKLIQNIVRQLQHLVSDEVCVQVAELYACERRRGAAGGNLSSQCVR
AAWETSYQWKAERVMAEENCFKVMFIQNKGEVTMTIELLDTEEAQADDPLEVQCLSNYME
QFVGTETSACSQGEGYYFKPVFLPRNLRQFRRWQLRQVEALRSRRELRDQLGVESAGNLD
CRFKLNTHKMVFVMNSEDYMYRRGALIKARKTHMRVSRVQRERFSRWHGAWQSEHVPPAA
ARSVQAWLLGDDLDDLLPCKTTCVVSQVKGQTVNRYQVRYSSKAPVSP
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatccaggctcacagcagcaccaagcacatcaccccgctccaggagaaagcc
ttcaccgcccagaaacaccagcagcacttccagaaactcaaggtagaagatgctctgtca
tacctggatcaggttaaaatccgttttgcgaacgatcccgggatctacaacaagttcctg
gacatcatgaaggagtttaagtctcagagtatcgatacgccgggcgtgataaaccgcgtc
tctcagctgttccacggccacccggacctcgtgctgggctttaacgccttcctgcctccc
ggatatcggatagaaatcccgaaaaacggaatggccttcctgcagtcgcctttcagtccg
cagcaggtttctcccggaaaagcaaagagcaccgagtcgagttcggcccagagcgagacg
gtggcgtcgcctcagagcacctcgccgtcttcgggcgtccctccggacccgcccgggaga
ctcgccctgcctctgcctagccagtcgcaaccagccacgtcgtccgcgtcaccgcccgca
tcggaagcgagtcccgtcgagttcgacagcgccatcagctacgtgaacaagatcaagagc
agatttctggaccatccggaaatctacaggtccttcctggaaatcctgcacacctaccag
aaggagcagttggagctgaaggagaacaggagcaggacgagtacagggatgacggaggat
gaggttttttccaaagtggcgagcctgtttaaaggacaggaggacctgctggcggagttt
ggacagttcctccccgacgccaagagatcgctgtttactagcggttcgttaacaggcaag
gagccggtgaagaagactgacgaagaggagttaaacaagcagcccaagaaaaggccacgc
ccacttctgctgcctcacatgacgccgctgcttaagaagaaaatgaagttctcctgctcc
aaagagccgtctttcgcgtcagttggaaagcatggggttctccgcgagttcaccttcttt
gacaaggttcggcgtttgtttaagagtcaggaggtgtatgagaacttcctgcgctgcatc
gccctgtttaaccaggaggtggtgtcgggagctgagctcctgcagcttgtcacgccgttt
ctcgggaagtttccagagttgtactcccagtttaagtcgttccttggcgagaaggagctg
tcgcactctgtatcaggtttgtcggagcgctatatggaagggggcggagctagggaggtg
gactacgcttcctgtaagagactcggttctagttacagagccctgccgaaaacgtaccaa
caacccaagtgcagcgggagaacagcgctctgtaaagaggtgctgaacgatacctgggtc
tcgttcccgtcgtggtcggaggactccaccttcgtgagctcgaagaagacgccatacgag
gagcagctgcaccgctgcgaggacgagaggttcgagctggacgtggttctggagaccaac
ctggccaccatcagggtcctggagagcgttcagaagaagctgtctcgcctctcgcccgag
gaccaggaccgcttccgattggacgactgtctgggcgggacctcggaggtgatccagcgc
cgcgccgtgtaccgcatttacggagataaagctcccgagatcatcgagggactgaagagg
aacccggccactgcagtacctgtggtactcaagaggttgaaagcgaaggaggaggagtgg
agagaagctcagcagggctttaataagatctggagggagcagtatgagaaggcgtaccta
aagtctctggaccaccagggcgtcaacttcaaacagaacgacatgaaggccctgaggtcc
aagagcctgctcaacgagatcgagagcatctacgacgagcgccaggagcaaagcacagag
gagggcggagtcggccagcagagtcgtgaagggggcagatcctcgagtgaacctcacctg
atcttctcctacgaggacaagcagatcctggaggacgccgcgtccctcatcatctatcat
gtgaagcgtcagcccaccatccacaaggaggacaaggaccagatcaagcgcatcatccac
cacttcatccccgacctgttcttctcgcggcgtggcgagctcagcgacacggaggagtgg
acggacgaggaggccgagacggaggacgggggcggggtcgcggccggggcggcgtcggac
gtacagacggcggcggtggcgatgtcggagcgagggggagggggaggagacttggcaggg
tctccggggagtcagcagcaggtgaacggcgagtcgaggcggcggcggtgcgcgtccccg
cgtggggcggagcaacaggagcagctggagcagcagaaggagcaggacggcatctacaac
ctgttcttcgtcaacaacaactggtacttcttcctgcggctgcaccagactctgtgctcg
cggctgctgaaggtgtaccggcaggccgagagacagctgctggagcaccgcgcagaacag
agcgcagagcgcctcctggtggccgagggacgcagggacaaggccacggatctcgccatg
gagctgcgactcaaacaacccagtgaggtggagctggaggagtactacccggcatttttg
gacatggtgcgcagtctgctagacggaaatctggagtcaacgcagtacgaggacacgctg
cgcgaaatgttcaccatccacgcctacatcggcttcaccatcgacaaactcatccagaac
atcgtcagacagctacagcacctggtgagcgacgaggtgtgtgttcaggtagctgagctg
tacgcgtgtgagcgaagacgtggcgccgcgggaggaaatctctcctctcagtgtgtgaga
gccgcctgggagaccagctaccagtggaaagctgagagagtgatggctgaggagaactgc
ttcaaggtaatgtttatccagaataaaggtgaggtgactatgaccatcgagctgctggac
actgaggaggctcaggctgacgatccactggaagtacagtgcttgtcgaactacatggag
cagtttgttggaactgaaacgtcggcgtgttcacagggagaaggttattacttcaaacca
gtattcctgcccaggaatctgcgtcagttccggcgctggcagctgcgacaggtggaggct
ctgcgcagtcggcgcgagctgcgggatcagctcggtgtggaaagcgccggaaacctcgac
tgcaggttcaaactcaatacacacaagatggtgttcgtcatgaactcggaggattacatg
taccgccgcggggcgctcatcaaggccaggaagacacacatgcgcgtgtcccgggtgcag
cgtgagcgtttctcccggtggcacggggcgtggcagagcgagcacgtccccccggccgcc
gcccgctccgtccaagcctggctcctcggagacgacctcgatgacctcctgccctgcaag
accacctgcgtggtgtcacaggtcaaaggtcaaactgtcaataggtaccaggtgcggtac
agcagcaaggctccggtttcaccgtga
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