Clarias gariepinus (North African catfish): 128530226
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Entry
128530226 CDS
T10780
Symbol
myo1f
Name
(RefSeq) unconventional myosin-If
KO
K10356
myosin I
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128530226 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128530226 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128530226 (myo1f)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128530226 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128530226 (myo1f)
04147 Exosome [BR:
cgar04147
]
128530226 (myo1f)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128530226 (myo1f)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Others
128530226 (myo1f)
Others
Actin-binding proteins
Myosins
128530226 (myo1f)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128530226 (myo1f)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128530226 (myo1f)
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128530226 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_9
SH3_2
nSTAND3
IQ
NPHP3_N
AAA_16
ABC_tran
AAA_22
RapZ-like_N
Microtub_bd
Sigma54_activat
IQCJ-SCHIP1
IQ_SCN5A_C
Amino_oxidase
Motif
Other DBs
NCBI-GeneID:
128530226
NCBI-ProteinID:
XP_053359989
LinkDB
All DBs
Position
9:complement(3689655..3729987)
Genome browser
AA seq
1092 aa
AA seq
DB search
MASKYHWQSQNVKQSGVDDMVLLSKITEDAIVENLKKRYLDDYIFTYIGSVLISVNPFKQ
MPYFTDREIELYQGAAQYENPPHIYALTDNMYRNMMIDSENQCVIISGESGAGKTVAAKY
IMGYISKVSGGGAKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEP
DGGKISNFLLEKSRVVSQNENERNFHIFYQLIEGSSAQQKEALGIMTPDYYTYLNQSGTY
KVDGTNDSSDFQETMEAMQVIGIPGENQMQVLNIVAGILHLGNISFIEVGNYGQVESTDL
LAFPAYLLGIDQNRLQEKLTSRKMDSKWGGKSESIDVTLNQEQACFTRDALAKALFARVF
DYLVEAINKAMQKPIEEFSVGVLDIYGFEIFQRNGFEQFCINFVNEKLQQIFIELTLKAE
QEEYVQEGIKWSPIEYFNNKIVCDLIENKLNPPGIMSILDDVCATLSAKGEGADSTLLQK
LQAAVGTHEHFNNWSSGFVIHHYAGKVSYDVNGFCERNRDVLFTDLIALMQSSEHNFIRS
LFPENLNTDKKGRPSTASTKIKRQANELVDTLMKCTPHYIRCIKPNETKRPKDWEESRAK
HQVEYLGLRENIRVRRAGFAYRRIFKKFLQRYAILTPETYPQWRGGEQQGVLHLLRSVNM
DNDQYQLGRTKIFVKNPESLFLLEEMRERKFDTFARTIQKAWRKYIARRKYEQMREEASD
ILYNSKERRRNSINRNFVGDYLGMEERPELRQFLSKRERVDFADSVNKYDRRFKSIKRDL
ILTPKGIYLIGREKVKKGPEKGQIKEVLKRKLEIGSIRSVSLSTRQDDFFILHEAQYDSL
LESLFKTEFLSLLCKRYEEQTKNKLTLSFNDRLEFRVKKEGWGGGGSRMLMFSRGQGDDS
QIKPAGKTLNISIGDGLPKTAKPTRKSMQPSQGGGRQAHNRGYQNGAAQFSRGNPRPQEQ
TYSQPDKWNRPPNAALPKLGSQKNKRGSAVPHTQPSNLDFLNVPDQGVSGMQRKRSISQR
PPPAPSSRPKAAARPQGPRCRALYQYNGQDVDELSFDVGEVIDLVNEDASGWWTGRLRGK
EGLFPGNYVEKI
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaatatcactggcagagtcagaatgtcaaacagagcggtgtggacgacatg
gtgctcctctccaagatcactgaggacgccattgtggagaacctgaagaagagatacctg
gacgactacatctttacctacatcggatctgtcttgatttcagtgaatccttttaaacag
atgccgtatttcacggatcgagagattgagctttaccaaggagctgcccagtatgaaaac
ccacctcacatctacgcattaacagacaacatgtacaggaacatgatgatcgacagtgag
aatcagtgtgtaatcatcagtggagagagtggcgcaggaaaaacagtggctgctaagtac
atcatgggctacatctccaaagtgtccggtggtggagctaaagttcagcatgtaaaagac
attatcctacagtccaaccctctactcgaggccttcgggaacgctaaaaccgtccgaaac
aacaactccagccgctttggaaaatacttcgagatccagttcagccgaggaggagaaccg
gacggaggcaaaatctccaacttcctgctggagaaatcccgagtcgtgagccagaacgag
aacgaaaggaacttccatattttctaccagttgatcgaaggctcttcagcacagcaaaag
gaagctttagggatcatgactcctgactattacacctacttaaaccagtcaggaacctac
aaagtggacggcaccaacgacagcagtgatttccaggagacgatggaagccatgcaggtg
atcgggatccccggagaaaaccagatgcaggtcctgaatatagtagctggaatcttacac
ctgggcaacatcagcttcatcgaggtggggaactacgggcaggtggagagcacagacttg
ctggccttccccgcctacctgctgggcatcgatcagaaccggctgcaggagaaactcacc
agcaggaagatggactccaagtggggcggcaaatccgaatccatcgacgtgaccctgaat
caggagcaggcgtgcttcacacgtgacgctctcgccaaggccctgttcgctcgcgttttc
gactacctggtggaggccataaacaaagccatgcagaagcccatcgaagagtttagcgtg
ggagttctggatatttacggattcgagatctttcagaggaatgggttcgagcagttctgt
ataaactttgtgaatgagaaacttcagcaaatcttcatcgagctgaccctgaaggcggag
caggaagaatatgtccaggaggggatcaagtggagtcctattgagtattttaacaacaaa
atagtgtgtgatcttattgaaaataaactgaacccgccgggtattatgagcatcctggat
gacgtatgtgccaccctgtctgccaagggagagggggccgatagcacgctactgcagaag
ctgcaggctgccgtgggcacgcacgagcactttaacaactggagctctggctttgttatt
caccactatgcaggcaaggtatcatacgacgtcaacggcttctgcgagaggaacagagat
gtgctctttacagacctcattgcactgatgcagagcagcgaacacaacttcatccgcagc
ctgtttcctgaaaacctcaacactgacaaaaaaggcagaccgtccacagcgagtacgaaa
attaaaaggcaggctaacgagctggtggatacgctgatgaaatgcactccgcactatatc
cgctgcatcaaacccaacgaaaccaagaggcccaaagactgggaggagagccgggcgaag
catcaggtggagtatttgggtttgcgtgaaaacatcagggtgcgccgagctggcttcgcc
taccgccgaattttcaagaagtttctacagaggtacgccatcctgaccccagagacgtac
cctcaatggcgtgggggcgaacagcagggcgtcctgcatctgctgcgctccgtgaacatg
gacaacgaccaataccagttgggccgcactaagatctttgtcaaaaacccagagtcgctg
tttctgctggaggagatgcgagagaggaagttcgacacgttcgccagaaccattcagaaa
gcatggaggaagtacatcgccaggaggaagtacgagcagatgagagaagaagcttctgat
attctttataactcgaaggagagacgcaggaatagcattaacaggaacttcgtcggtgat
tacctgggcatggaggagaggcctgaactgcgtcagttcttgtccaagagagagcgagtc
gactttgctgactcggtgaacaaatacgaccgcaggtttaagtcaattaaaagggatctg
atcctgacccctaagggcatctacctgatcggacgcgagaaagtcaagaagggtccagag
aaaggccagatcaaagaagtgctgaagagaaagctagaaatcggctccatacgctcggtt
tcactgagcacgaggcaggacgacttcttcatcctgcacgaggctcagtacgacagcctg
ctggagtctttatttaaaacggagtttctgagcttgctgtgtaagcgctatgaggagcag
accaagaacaaactcacactgtcctttaatgacaggctggagtttcgcgtgaagaaggag
ggatggggaggaggagggagccgcatgctcatgttctccaggggacagggagacgactca
cagatcaaacccgcaggaaaaactctcaatatcagtataggagacggactacccaagacc
gcaaaaccgacgagaaaaagcatgcaaccctctcaaggaggcggaagacaagcccacaac
agaggttaccagaatggggcggcgcagttctcccgtggaaacccccggccgcaggaacag
acctactctcaaccggataagtggaaccggccgcccaacgccgccctcccaaagctgggc
tctcaaaaaaacaagcgaggatcagcagtcccacacacacagccttctaacctggacttc
ctcaatgtacctgatcagggcgtctcgggaatgcagcgtaagaggagcattagccagcgt
cctcctccggcccccagcagccgccccaaagctgcggcgcgaccgcagggtcctcgatgc
cgtgcgctgtatcagtacaacggtcaggacgtggatgagctcagctttgatgtcggtgaa
gttatagacctcgttaatgaagatgcgtctggctggtggactggaaggttacgcgggaaa
gagggtttattccccgggaattacgtggagaaaatctga
DBGET
integrated database retrieval system
