Clarias gariepinus (North African catfish): 128530276
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Entry
128530276 CDS
T10780
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgar01001
]
128530276 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128530276 (trim33)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128530276 (trim33)
Protein kinases [BR:
cgar01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
128530276 (trim33)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128530276 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
128530276
NCBI-ProteinID:
XP_053360094
LinkDB
All DBs
Position
9:complement(6959827..7000284)
Genome browser
AA seq
1234 aa
AA seq
DB search
MADNKGQGDTESSASMEAEPPTTLNGDDAGEHSETANSADAAPKDGDDGQGRETAPETPT
PSAESSEPAAASAATDGGGGGGGEEVDGEGGGGGGGGGGGGDAERGGGEASTSSGHVNPS
PDTNSNAESTEPAVDATATAAVASMPSPAPGAETAAGAAATPTPPAAAAAAATPAAVPLN
LLDTCAVCKQSLQGRDCEPKLLPCLHSFCLKCVPQLERQVSLGVTGPHGQDTHVVNVMRC
TVCYQDYKPIDMVDNYFVKDSTEASSTAAEKSMQVCTSCEDNASAVGFCVECGEWLCKTC
IEAHQRVKFTKDHTIRKKEEVSQESVTTSGQRTVFCPVHKQEALKLFCETCDKLTCRDCQ
LLEHKEHRYQFLEEAFENQKGIIETFMAKLHEKRNYVQYSAAQVQNRLKEASETHKKVEH
EIKIAVFTLINEINKKGKSLLQQLESVTKERTMKLLNQQRDINSLAQQILHVLRFTHWAI
GNGSSTALLYSKRLITFQLRFLLKARVDPVPHANGAVRFFCDPTFWAKNVVNLGNLVIEK
VPPPAPHPPNMMVGQQISPSHNTAGKHPGQISLAQLRLQHMQHASFQQKQQQQQQQQQQQ
LQQQQMQQQMRLASQMAQHPRQVGPPQMMQQQPPRLISMQSLQREGVNGGPHMYPPPPHM
RMTNSQNRMPVAQPRLNGQLYPMMQPQLQRQHSNPGHAGPFPVASLHNISANNPTSPTSA
SMASVHGHRGPTSPVVGPIELIPSVTNPENLPCLPDIPPIQLEDAGSIALDSILSRVISA
TTHPPTLASNNNLNSSPGPSTHSPGSSGLSSSLTPARPSSSSSTGSRGSRGSAGSSGPGN
TAAEQVKVKQEPGAEEECGFSGASVKSERGKDGRRSACMMSSPEASMTPPLPVLGSVSTG
SVQDILRTLGENVKIEHQSENQLPSCSSTQKPNSQSSTHFTNGTQTTPLSHRSPRGSISA
SQTNANNQSSTEGKEDDPNEDWCAVCQNGGELLCCDRCPKVFHITCHIPILRSSPSGDWM
CTFCRSLTNPEMEYICDDDPPGKKDKSEQGLSPEDQRRCERLLLYIFCHELSVEFQEPVP
STVPNYYKIIKHPMDLNLVKRKLQLKHPQHYQSPKDFVYDVRLVFSNCAKYNEMSRIIQV
YDEEKQSNVQADSEVAEAGKAVSLYFEEKLALLFPNQSFPVEPEKRSRDEGVAAVAAATA
TAATAEGAEEDSDDDFVQPKRKRLKPEEKPVHIK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggccaaggggatacagagagctcggctagcatggaggcagaacct
ccgacgacgcttaacggagacgacgcaggcgaacacagcgagacagcgaacagcgcggac
gccgccccgaaggacggagacgacggacagggccgggaaaccgctccggagacgccgaca
cccagcgccgagagcagcgagcctgccgccgccagcgccgccaccgatggagggggagga
ggaggaggagaagaggtggacggagaaggtggtggtggtggtggtggtggaggaggagga
ggggatgcagagagaggaggtggagaagcgagcaccagcagcggtcatgttaaccctagc
ccggacacgaactcgaacgcggagagcaccgagcccgcggtagacgccacagccaccgcc
gcagtggcgagcatgccttccccagctcccggtgctgagacggcggctggcgcggctgcg
actccgacaccaccagcggcagcagcggcggcggcgactccggctgcggtgccgctgaac
ctcctggatacctgcgccgtgtgtaaacagagtctccagggccgagactgcgagcccaaa
ctcctgccctgtctgcactcgttctgtttaaagtgtgtccctcagctggagagacaggtc
agcctgggagtcaccggtcctcatggtcaggacacacacgtcgtgaacgtcatgcggtgt
acggtttgctaccaggactacaaaccgatcgacatggtggacaattactttgtcaaggac
tcgacagaggcgtctagcacagcggcagaaaaatcgatgcaggtatgcaccagctgcgag
gacaacgccagcgctgtcggtttctgcgtagagtgcggcgaatggctatgcaagacgtgc
atcgaagcgcaccagagagtgaaatttaccaaggatcatacgatacggaagaaagaggag
gtctctcaagagtcagtaactacatcaggacaaaggacggtcttctgtccggtccacaaa
caggaggcgctcaagctcttctgtgagacctgcgacaagctgacctgcagagactgccag
ctgctggagcacaaggaacacaggtaccagttcctggaggaggcttttgagaatcagaaa
ggaattattgagacgtttatggccaaactgcacgaaaagagaaattatgtacagtattct
gccgctcaggtgcaaaatagattaaaagaggcgtccgagacgcacaagaaggttgagcat
gagattaaaatcgcagtctttacacttataaatgaaatcaacaagaaaggcaaatctcta
cttcagcagctggagagtgtaacgaaggagcgcacaatgaagttgcttaaccagcagcgg
gacatcaactcactggcacagcagatcctgcacgttctccgcttcacacactgggccatc
ggcaacggcagcagcaccgccttgctctacagcaagagactgatcacattccagcttcgc
ttcctgcttaaagctcgcgttgacccggtgcctcatgccaacggagcggtccgcttcttc
tgtgaccccacgttctgggcgaagaacgtcgtaaaccttggaaacctggtgattgagaag
gtacccccaccggctcctcatcctcccaacatgatggtggggcagcagatctcacccagt
cacaacacggcagggaaacaccctgggcagatcagcctggcgcagctgcggctgcagcac
atgcagcatgcttctttccaacagaaacagcagcagcagcagcaacaacagcaacaacag
ttgcagcagcagcagatgcaacagcaaatgcgcctcgcctcgcagatggcccagcacccg
cggcaggtagggccgcctcagatgatgcagcagcagcctccaagactcattagcatgcag
tcgctgcagagggagggtgttaacggcgggccgcatatgtacccccctccccctcacatg
cgcatgaccaattctcagaaccgcatgcctgtcgcacaaccccgcctcaacgggcagctg
tatcccatgatgcaaccgcagctccagagacagcattccaaccccggccacgccggcccc
tttcccgtggcgtctctgcacaacatcagcgccaacaaccctaccagccctaccagcgcc
agcatggctagtgtccatggccaccggggacccaccagccccgtggtgggtcccatcgag
cttattccttcagtgacaaaccctgagaacctaccttgtctccctgacatacctcccatt
cagttggaagacgcaggttcgattgcattggacagtatcttaagtcgcgtcatttctgcc
accacacaccccccaactctagcatccaacaacaacctgaactcctcaccgggcccctcc
acacactctcccgggtcgtcagggttatcaagctctctcacccctgcacggccctccagc
tcctccagcacaggaagtcgtggcagccgagggtcagcaggaagttcaggacccgggaac
acagccgcagaacaggtgaaggtcaaacaggagcctggagcggaggaggagtgtggattc
tccggggccagtgtcaagtctgaacggggcaaagatggccgacggagcgcttgcatgatg
agcagtccggaggccagcatgactccgcctctccccgtgctgggttccgtgtccaccggt
tccgtgcaggacattttaaggacgctgggagagaatgttaaaatcgagcatcagagtgag
aaccagctgccgtcctgcagcagcacgcaaaagccgaactctcaaagcagtactcatttc
accaacgggactcagaccactccgctctcccatcggtccccgaggggcagcatcagcgcc
tctcagaccaacgccaacaaccagtcgagcacggaaggtaaagaggacgaccccaacgaa
gactggtgtgcggtgtgtcagaacggcggagagctcctgtgctgcgaccgctgcccgaaa
gtcttccacattacctgccatattcctatactgcgctcctcaccaagcggagactggatg
tgcacattttgtagaagtctaaccaatcctgagatggagtatatttgtgacgatgatcct
cctggtaaaaaggacaagagtgagcaggggctgagtcctgaggaccagaggagatgcgag
cgtctgctgctttatatattctgtcacgagttaagtgtagagtttcaagaacctgttcct
tctacggtgcccaactactataagatcataaagcaccccatggatctgaaccttgtgaag
agaaagctgcagcttaagcacccacagcactaccagagccccaaagatttcgtctacgac
gtccgtctggtgttcagcaactgtgccaagtacaacgagatgtctcgaataatccaggta
tatgatgaggagaaacagagtaatgtgcaggccgactcggaggtcgccgaagcaggaaaa
gccgtcagtttgtacttcgaggaaaagctggccctgctttttcccaaccagagtttcccg
gtagaaccggagaaaagatcacgggacgaaggcgtcgccgccgtcgccgctgctaccgcc
accgccgccactgccgagggagcagaagaggactcggacgatgatttcgtgcagccgaag
cggaagaggttaaaacccgaggaaaaacccgtacacataaagtga
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