Clarias gariepinus (North African catfish): 128530364
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Entry
128530364 CDS
T10780
Symbol
stx2b
Name
(RefSeq) syntaxin-2 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128530364 (stx2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128530364 (stx2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128530364 (stx2b)
Membrane trafficking [BR:
cgar04131
]
SNARE
Syntaxin (Qa)
Stx-PM
128530364 (stx2b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
128530364 (stx2b)
Exosomal proteins of other body fluids (saliva and urine)
128530364 (stx2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF6262
DUF16
TMEM120A-B
Spectrin_Anc-1
Tlp
Lzipper-MIP1
EcoEI_R_C
TadE
DUF3040
STX6_10_61_N
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
128530364
NCBI-ProteinID:
XP_053360246
LinkDB
All DBs
Position
9:32262076..32277045
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AA seq
309 aa
AA seq
DB search
MRDRLAELKSGRPSDEEDGSVAVSVDRGGFMEGFFKKVEEVRSIIDKISSQVNEVKKKHS
MILSAPNPDERTKEELEQLTVEIKTNANVVRTKLKSMQQSLPPEDQANHASVDERIQRTQ
YAVLSRKFVEVMTKYNDTQVSFREHSKGRIQRQLEITGRKTTDEELEDMLESGNPSIFTS
DIILDSQITRQALNEIESRHKDIMRLESSIKELHSMFMDIAMLVETQGEMIDNIENNVKN
AGEYVVKANQEVKKAVRYQKSARRKYFILALILLVVIGVLALIIGLSVGLSSKSTVTAAS
SITATNKPA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccgactggcggagctgaagtcggggaggcccagtgatgaggaagatggcagc
gtggctgtttctgtggatcgaggtggctttatggagggcttttttaaaaaggtggaggag
gtcaggagcatcatcgataagatttcctcgcaggtgaacgaggtgaagaagaagcacagc
atgatcctctccgcgcccaaccctgacgaaaggaccaaagaggagcttgagcagctgacg
gttgaaattaaaacaaacgccaatgtggtgcggaccaaactcaaatctatgcagcagagt
ttgcctcctgaagaccaagccaaccatgcctcggtggacgagcgcattcagaggacacag
tacgcggtcttgtctcggaagttcgtcgaggtcatgaccaagtacaacgacacacaggtc
tccttcagagagcacagcaagggcaggatccagagacagctggagatcactggaaggaag
accacggatgaggagctggaggacatgctggagagcgggaatccttccatttttacctca
gatatcatcttggactcgcagataacccggcaggccctgaacgagattgagtcacggcac
aaggatatcatgcggctcgagtccagcatcaaagagctccacagcatgtttatggacata
gccatgctcgtagagacacagggtgagatgatcgataacatagagaacaatgtgaagaat
gcaggggagtatgtagtcaaagctaaccaggaggtgaagaaagctgtgaggtaccagaag
agcgcccggcggaaatattttattttggctctcatcttgcttgtggtaatcggtgttctt
gcgctgatcatcggcctttccgtgggtttgtcatctaaatctacagtaactgccgcctcc
tctatcactgcaacaaacaaaccagcttaa
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