Clarias gariepinus (North African catfish): 128530454
Help
Entry
128530454 CDS
T10780
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128530454 (fgd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
RHG20_PH
PH_alsin
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128530454
NCBI-ProteinID:
XP_053360389
LinkDB
All DBs
Position
9:4853241..4907632
Genome browser
AA seq
994 aa
AA seq
DB search
MQLNRPRSALIAFSPPPQQPSDPHPSFSSQFKAMRFSYHLSPQPGSRKSGSSSTSSPRLL
TKSLSLEPGPCPGAHEVPQRLCSDPGPLGLQHCNGTSEDEPQKTPPLPPKTRPPLPGPKP
QVPPKPPHLQQQSGRRPRPPDKPLPPPPCRPLPADPRQSRTPLTRTEGSSSPTCVLSLIE
KFEREQIIMVPDITGGVMCVPRVPEPQPTTDAILPCTSLNEDIEPASVEKEQEKETEEEE
ENEEEEDKEDREIQEDIEDEDNKLGASCSEKRLSTESGYGASDKLLDAIEIRDLGQLEIP
PDRLSLPPQQTDTKLTNRDSGIDSISSPSHSEELCFAGDDREVCMSLPRLSSSSSCGCVE
GPAGEGAVAAVEEGTRDSEGDSDLEEGSGDESENAMAIQPQPKAERQDSVELSVQQRVFK
IASELLHTEKAYVSRLHLLDQVFCGRLMEEARARGSFPCEVVMGIFSNICSIYCFHQQFL
LPALEKRMEEWDVNPRIGDILQKLAPFLKMYGEYVKNFDTAMELVNTWMERSSQFKAIVH
DIQKEEMCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDAEDFKDAQKSLELIATAAE
HSNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSAKNGTSQDRYLILFN
DRLLYCVPKLRLIGQKFGVRARIDVDGMELKETSSMNMPRTFLVSGKQRSLELQARTEEE
KKDWIQAIQATIQKHEQSVETFRMLNCSVREDDCTPPNSPNCTELGKRAPTPIREKEVTL
CMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLLYDNNRANRVCIDCYTTLVGVPPS
PASLTNSTQRRRSILEKQASVAAENSVLCSFLHHMEKGSGRGWQKAWFVVPENEPLVLYI
YGAPQDVKAQRSIPLIGFEVSLPESCDRLERRYAFKMSQSHLTVYFSADGEELQRRWLEV
LSRAGRGEELQVHGSISEALEEEAEEQSSLGEST
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaccggccccggagcgcgctgatcgccttcagcccgccgccacaacagccg
tccgacccgcacccgagcttctccagtcagttcaaggcgatgcgtttttcttaccatctc
agcccacagcccggatcccgcaaaagcggctcgtcgtccacgtccagtccccggctcctg
acaaagagtctgtctctggagccaggcccgtgtccaggagcccatgaggtccctcagcgt
ctctgttcggaccccgggcccctaggactgcagcattgcaatggcacaagcgaggacgag
cctcaaaaaaccccgcctctgcctcctaaaacacgccccccattacccggtcccaaaccg
caagtgcccccgaaaccaccgcacctccaacaacagagcggccgccgaccacggcctccg
gacaaacccctgcccccgcctccatgccgcccactcccagcagaccctcgccaatcacgg
acgcctctgacgcggaccgagggaagctcctccccgacctgtgtcctgtcactcatcgag
aaatttgagagggagcaaatcatcatggtgcctgacatcacaggtggagtgatgtgtgtg
ccgagggtaccggaaccacagcccactacggacgcgattttaccctgcacgtccctcaac
gaggacatagagcctgcttctgtcgagaaggagcaggaaaaggaaacggaagaagaggag
gaaaacgaggaagaggaagacaaagaggacagggagatacaggaagacatagaggacgag
gataacaaactgggagcctcctgctcagaaaagcgactctccacagagtccggttacggc
gcctccgataaactcctggacgcaatagagataagagacctcggccagttggaaatccct
cctgaccgcttgtctcttcctccgcagcaaacggacactaaactaaccaatcgggacagc
ggcatcgacagcatcagctctccgtctcacagcgaggagctgtgcttcgccggagacgac
cgagaggtgtgcatgtctctccctcgcctctcgtcctcgtcctcgtgcggttgtgtcgaa
ggaccagcgggagaaggagctgtcgctgccgtagaggaagggactcgggactcggaggga
gacagcgatttggaagaagggagcggggatgagagcgagaacgccatggccatacagcct
cagcccaaagcagagagacaggactctgttgagctatcagtgcagcagcgcgtgtttaaa
atcgccagcgagctcctccatacggagaaggcgtacgtgtccaggcttcacctcctggac
caggtgttctgcgggcggctgatggaggaggcgcgagcaagaggctcgttcccctgcgag
gtggtgatgggcatcttttccaacatctgctctatctactgcttccatcaacagtttctg
ctgccagcgctggagaaacgcatggaggaatgggacgtaaacccgcggatcggggacatc
ctccagaaactcgctcccttcctgaagatgtatggcgaatacgtgaagaacttcgacacg
gccatggagctggtgaacacctggatggagcgctcctcacagttcaaagccatcgttcat
gacattcagaaagaggagatgtgcggaaacctcaccctccagcaccacatgttagagccc
gtccagaggatccctcgatacgagctcctactaaaggactacctgcaccggctgcccgag
gacgccgaggattttaaagatgcacaaaagtccttggagttgattgctacagcagccgag
cattccaacgcggccattaggaaaatggagcgcatgagaaagttgctgaaggtgtacgag
ctgcttggtggagaagaggatattgtgaatcctactaatgagctcattaaagagggacac
atcctcaaactgtcagccaaaaacggaacctcgcaggacagatacctcatactgttcaat
gacaggttgctgtactgtgtcccaaaactcagactgatcggacagaagtttggagtgcgt
gctcggattgatgtagacggcatggagctgaaagagacgagcagtatgaacatgccccgg
acgtttctggtttcagggaaacagcgctctctcgaactacaggccaggacagaagaagaa
aagaaagactggattcaggcgatccaggccactatccaaaagcacgagcagagtgtggag
acgttcaggatgttgaactgttcggtgcgcgaggacgactgtacgcctcccaactctccg
aactgcacggagctgggaaagcgtgctcccactccgatccgggaaaaagaagtaacgctg
tgtatgaagtgccaggagccgttcaactccatcactaagagacgccaccactgcaaagca
tgcggacatgtggtatgtgggaaatgctcggaattccgtgcgcgcttgttgtacgataac
aatcgagcgaatcgggtgtgtatagactgctatacgacgctggtgggagtcccgccttct
ccggccagcttgaccaatagcactcagaggagacgctccattctagagaaacaggcctct
gtggcggcggagaacagcgtcctctgcagcttcctgcaccacatggagaagggcagcggc
cgcggctggcagaaggcctggtttgtcgtccctgaaaacgaacccctggtgctttacatt
tatggtgctccacaggatgtcaaggcccagcgcagcatccctctcatcggcttcgaagtc
tccctccccgagtcatgtgaccgtctggagcggcgctacgccttcaaaatgagccagagt
cacctgactgtttacttcagcgccgacggggaagagctccaacgccgttggttggaggtg
ctctccagagccgggagaggggaggagctacaagtgcacggttcgatctcggaggctctg
gaagaagaagcggaggaacagagctctctaggagaaagcacatga
DBGET
integrated database retrieval system
