Clarias gariepinus (North African catfish): 128530459
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Entry
128530459 CDS
T10780
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin)
KO
K24495
myomesin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128530459 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128530459 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128530459 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
ig
Ig_2
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_3
C2-set_2
bCoV_SUD_C
Motif
Other DBs
NCBI-GeneID:
128530459
NCBI-ProteinID:
XP_053360399
LinkDB
All DBs
Position
1:38226189..38264572
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AA seq
1526 aa
AA seq
DB search
MSGSIQVQQEQQRRNLETQYESSYHQSSLSSFSRQSYAAHMSSVGVQASSRKQEKKLSSI
SSVHTSAKKQEKKLSSISSVHTSAKKQEKKLSSISSVQISDKKQEKKLSSISRMKASSKM
QEEKKALYAKEHKCACLALDKEESVVGYVVPVCRSSYLATQDLMESQEEAKEEGLGYVVM
KNLFSRDTEYQLKLVKKSRSTTVRESAEKMALSRKIEEKYEFQRKLNTDSLTHPPEFIVK
PRGQTVWEGKSVTLHCTVAGWPKPRVAWYKNNVLIDAKAHAEKYTTESNYNMHSLEIKNC
EFTDTAEYRISALNLKGESSAFASVIIKRFKDEEVSERPHGFSPEYGVTFRTTIIDKFGV
AFGREGETMSLGCTVIVYPTVKRYQPEVLWYRNGVLLEPSKWVQMHWSGQRATLTLLHLN
KEDEGLYTLRINTKSGFDSHSAFVFVRDSDVEVEGVPVAPLDVKCHDANKDYVVVTWKQP
AVEGSSSILGYFIDRCEVGTHHWTQCNDTPVKYARFPVTGLIEGRTYIFRVSALNLAGVS
HPSRVSDPVLAMDPADRARLRAGVSAPWTGMIKFTEEEPTVGIIPGPPTDLAVTEATKSY
VVLSWKPPVQRGHEGVMYYVEKCMVGTDTWQRVNTGMPAKSPRFALFDLAEGKSYSFRVR
SCNSAGVSESSEETGETTVGDRLDLPSAPGPVVPIRNTATSVVVTWGSSKEARDLVRYYV
EVSVVGSNVWVPCNNKPVKDTRFVCHGLNTGDKCVFRVKAVNAAGYSTYSSESEQCLVKA
AIEVPSPPSGLTMVERVRDYMVLNWQASPKTGGADIRGYYLDYRTVKGSVVSRWHEINTK
AVTGTSYKVENLKENLLYQFQVRAINQAGISESCVTEVAFECKEWTVALPGPPHGLHVLE
LRKDSLVLLWEPPTFNGRSPITGYYVDIKEGDGKWRGVQDRSTKDEFLQISGLKEGASYK
LRVHAKNIAGVGGPSEATDPIIAQTRPGTNEIVVDVDDDGVISLIFECSEMTESSKFVWS
KNYQELTDTSRLNVETVKGKSRVIFKDPSLEDLGIYSCAVTNTDGVSASYTLTEEGLRRL
LDISHDHKFPIIPFKSQMAVELQEKGRVRFWAQVAKFTANCKVEHVFNDNIITHGKKYTM
NFDKNTGIIEMFMDSLEISDEGTFTFNLVDGKATGRTSLVLIGKEFAELQKKSEFERAEW
VRRQGPHFVEYLSFEVTEECDVHLKSRVGNIKADTQVTWIKDGIDIAEGDEDAKKIGIAE
NMLSFNIGKLTKKDAGVYEVELSDSRGKDKTLLDLTEAGYKAVLNAMFKVIAHSSTELKV
QSTEHGIILYTQVVYHTEELPVGWFHKDGKISYSDKVQCGVTEDQLWLKINEPTDKNKGK
YAIDIFAGEGSVRRVLDLTGQVWEEAFSEFQRLKAAAIAERNRARVIGGLPDVVTIQEGK
SLNLTGNVWGDPQPEVSWVKNDKQLVPDDHLTLKFEHGKFASITIAAVSSTDSGKYALMV
KNKYGTEAGEFTVSVYIPEDEAEKKD
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatccatccaagtgcaacaggagcagcaacgacggaacctggagactcaatat
gaaagcagctaccaccaaagttctctgtcgtcctttagccgccagtcgtatgccgctcac
atgagcagcgtgggggtgcaggcgtcaagtagaaagcaggagaagaaactgagctccatc
tccagcgtgcatacttcagccaagaagcaggagaagaaactgagctccatctccagcgtg
catacttcagccaagaagcaggagaagaaactgagctccatctccagcgtgcaaatttca
gataagaagcaggaaaagaaactgagctccatctccaggatgaaggcttcaagtaagatg
caagaggaaaaaaaggctttgtacgccaaggaacacaagtgtgcctgcctggcactggac
aaagaggagagtgttgtgggatacgtggtgccagtttgtagaagcagttatttggctaca
caagatctgatggagagccaggaggaggcgaaggaggagggtttgggctacgtggtcatg
aagaacctcttctccagagacaccgagtaccagctgaaactggtgaagaagagccgcagt
acgactgtgagggagtctgcagaaaaaatggcccttagcaggaagattgaagaaaagtat
gagttccagaggaagctgaacacggacagtctgactcatcctcctgagttcattgtgaag
ccgcgtggtcagactgtgtgggagggaaagagtgtgacgctgcactgcaccgtcgctggc
tggcccaaacctcgcgtggcctggtacaaaaataacgtactcatcgatgctaaggctcat
gctgagaagtacactacagaaagcaattacaacatgcactctctggagattaaaaactgt
gaattcactgacacggcagaatatcgcatttcagctctcaacctgaaaggcgagagctct
gcctttgcctcggtcatcattaaaagattcaaagatgaagaagtgtctgaaagaccccat
ggtttcagtcctgaatatggagttaccttcaggaccaccattatcgataagtttggagtg
gcttttggccgtgaaggagagaccatgagtttgggctgcactgtcatcgtgtatcccact
gtgaaacgctatcagcctgaggtgctctggtacaggaatggtgtacttctggagccatcc
aaatgggtgcagatgcactggagcggacagcgagcaacactcacactcctccacctcaac
aaagaagacgagggactttacactctgcgcatcaacaccaagtcaggcttcgactctcac
tccgccttcgtgttcgtccgagattctgacgtggaggttgaaggagtccctgttgccccc
ctggatgtgaagtgtcatgatgctaataaggattatgtggtggtgacctggaaacagcct
gcagttgagggcagcagctccatcctgggctactttatagacaggtgtgaagttggcact
catcactggacccagtgtaacgacactcccgtaaaatacgcccgttttccagtcaccggg
ctcatcgaggggcgcacttacattttccgtgttagcgctctgaacctagccggggtcagt
cacccttctcgtgtctctgaccctgtacttgcaatggacccagctgaccgcgcccgtctg
agagctggcgtttctgctccatggactggtatgattaaattcactgaggaagaacccaca
gttggtataatccctgggcctcctactgatctggctgtgactgaggccactaagagctac
gtggtgctcagctggaagcctcctgtgcagagaggacatgaaggagttatgtattatgtg
gagaagtgcatggttggcacggacacctggcagagggtgaacactggaatgccagcaaag
tcccctcgctttgccctcttcgacttggccgagggcaaatcctacagtttccgcgtgcgc
tcctgcaactctgcaggtgtcagcgagtcatctgaggaaactggagaaacgactgttgga
gatagactggacttgccctcggcacccgggccggttgtgccgatcaggaacaccgccacc
tctgttgtggtgacctgggggtcttctaaagaggccagagatcttgtgcgctattacgtg
gaagtcagcgttgttggcagcaatgtgtgggtgccatgtaacaacaaaccagtcaaagac
accaggtttgtgtgtcacggattgaacacgggagacaaatgtgtgttcagagtgaaggcc
gtgaacgctgccggctacagcacttattccagcgagtctgaacaatgccttgtaaaagca
gctattgaggtgccttctcctccctctggtctcactatggtggagcgtgtccgtgactac
atggtgttgaactggcaggcttctcctaagaccggtggagccgacatcaggggttactac
ctggactacaggaccgttaagggcagtgtcgtaagcaggtggcatgagatcaacaccaag
gctgtcactggaacttcctataaggtggagaacctgaaggagaatctgttgtaccagttc
caggttcgggcaattaaccaggctggtattagcgagtcctgtgtcaccgaagttgccttt
gagtgtaaggagtggactgttgcgttgccaggtcctcctcatgggcttcacgtgctggag
ctgagaaaggattcactggtgctgctttgggagccacccacattcaacggccgcagcccc
atcaccggctactatgtggacatcaaggagggggatggcaaatggagaggagttcaggat
aggtccaccaaggatgaatttctacagatatctggcttgaaagaaggcgcctcctacaaa
ctgcgtgtccatgctaagaatatcgcaggtgtcggtggaccctctgaagccacagacccc
atcatcgctcagactcgcccaggcactaatgagattgtggtcgatgtggatgatgacgga
gtgatctcgctgatctttgagtgctctgaaatgaccgaaagttctaagtttgtgtggtcg
aagaactaccaggaactcaccgatacctcccgtctcaatgtcgaaacagtcaagggaaaa
tccagagtcatctttaaagatccttcactggaagacctgggcatctactcttgtgctgtc
accaacactgatggagtttctgccagctacacactgacagaggagggtctgaggcgcttg
ttggacatcagccacgatcacaagttccccattattcctttcaagagtcaaatggctgtt
gagctacaggagaaaggacgtgtgcgattctgggcgcaggttgccaagtttaccgccaac
tgcaaagtggagcatgttttcaacgataacatcattactcacggaaagaaatacaccatg
aatttcgacaagaacaccggcattattgagatgtttatggactctttggaaatctccgat
gaaggaaccttcacgtttaaccttgttgatggcaaagctacgggccgcaccagcttggtg
cttattggaaaagagtttgctgagcttcagaagaagtccgagtttgagagagcagagtgg
gtcaggagacaaggtcctcactttgtggaataccttagtttcgaggtcaccgaagaatgt
gatgtgcaccttaaaagcagggtaggaaatatcaaagctgacacccaggtaacctggatt
aaggatggaattgacattgctgagggtgatgaagatgctaagaaaattggcattgcagag
aacatgctgtccttcaacatcggcaagctcacaaagaaagacgcaggtgtttatgaggtg
gaactgtcagacagcagaggaaaggataagacattgcttgatctgacagaagcaggttat
aaggctgtgttgaatgcaatgttcaaagttatagcccactcttctaccgaattgaaggtt
cagagcaccgagcatggaatcatcctctacacacaagtggtgtatcatacagaggagctc
cctgttggctggtttcacaaagatggcaagatttcatactcagacaaagtgcagtgtggg
gtcacagaagaccagctgtggctgaaaatcaacgagcccacagacaagaacaagggcaag
tatgcaatcgacatcttcgccggcgagggcagcgtcaggagagttcttgacctcactggg
caagtatgggaagaggccttttcagagttccagaggcttaaggctgcagctattgcagaa
agaaaccgagcacgtgtaatcggaggcctgccagatgtggtgactatccaggagggcaag
tctttgaacctcaccggcaacgtgtggggcgacccacagcctgaagtcagctgggtgaag
aatgacaaacagctggtacctgatgatcacctcacgctcaagttcgagcacggcaagttt
gccagcatcaccatcgcagcagtcagttccactgactcgggcaagtacgccctgatggtg
aagaacaagtatggaacagaggctggcgagttcacagtcagcgtctacataccagaagat
gaggctgaaaagaaggattag
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integrated database retrieval system
