Clarias gariepinus (North African catfish): 128530462
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Entry
128530462 CDS
T10780
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128530462 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128530462 (ufd1l)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128530462 (ufd1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
128530462
NCBI-ProteinID:
XP_053360401
LinkDB
All DBs
Position
9:complement(19465519..19470001)
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AA seq
308 aa
AA seq
DB search
MFSFNMFDHPIPRAFHSRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERPTQHHEEPTDEETDASNYEMDIGFRAFTGSGNRLDGKK
KGIDPNPFRIVPSDIKRGIPNYDFKVGKITFIRNSRPQPRKTEEEDSSTSFIAFSGEGQS
LRKKGRKS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctttaacatgtttgatcacccgatcccgcgagccttccacagccgcttctcc
actcagtaccgctgttactccgtgtccatgctggccgggcccaacgaccgctcagacgtc
gagaaaggcggaaaaattatcatgcccccatctgcactggaccagctaagcagacttaat
atcacataccctatgctgtttaaactgaccaataagaactcagacagaatgacacactgt
ggtgttttggagtttgttgctgatgaagggatctgttacttgcctcattggatgatgcag
aacctcttgctggaagaaggaggtttggtccaggttgaaagtgttaatctaatggtggca
acatactccaaatttcagccccagagtccagatttcttggacatcacaaaccccaaagct
gtactagaaaatgcattgagaaactttgcttgcttgactactggtgatgttattgctatc
aactacaatgaaaagatctatgagctgcgtgtcatggagaccaaaccggacaaagcagtg
tccataattgaatgtgacatgaatgttgactttgatgctccactcggttataaggagcca
gagagacccacacagcatcacgaggaaccaacagacgaagagacagatgccagtaattat
gaaatggatatcggattcagagctttcacaggctctggaaatcgccttgatggaaagaag
aaaggcattgatccaaatcctttccgcattgttccaagtgacatcaaacggggtattccg
aactatgacttcaaggttgggaagatcaccttcatcagaaactctagaccacagcctcgg
aaaacagaggaggaggactcttccactagcttcattgcattctcgggagaaggccaatcc
ttgcgcaagaaaggcaggaaatcataa
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