Clarias gariepinus (North African catfish): 128530471
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Entry
128530471 CDS
T10780
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128530471 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128530471 (dmxl1)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128530471 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
128530471 (dmxl1)
RAVE complex
128530471 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EML
PEP5_VPS11_N
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
128530471
NCBI-ProteinID:
XP_053360411
LinkDB
All DBs
Position
9:18285405..18318556
Genome browser
AA seq
2991 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFFVGSINDVPFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVNCSQQGQIAASYGNIVCIFDPVLMSPKEKTPMKPNYHWQITGQFDLQSKAHIIAWSP
TGTCLLTGSGCLQLWSTMNFFGGAEEEMGSDPLSSWRCIWQCNTASPVHLIKFSPDGEFF
ATAGQDDCLVKVWYSMNKWQYDAAKLFTPPELGSQGKPDFSFIYLAHPRSVTGFSWRKTS
KYMPRGAVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRQNHSGSNDTLKSSNLKKAQCN
NKGHSRNLPELNLAEMNRGPVRGMAHSRLLPQQQNKHYTHRATVAHANALCHFHIAASIN
PATDIPLLPSISSLSGSDDEETGGPFTVHWLNNKELHLTLTMEVFLQQLRSSMEHQNPPQ
PSQADDDCYEEGSTMAPESRNEEIIFKDGSSIPLPKAAVIHQVEVLLSDWNRGADMLFSI
HPMDGSLLVWQIDWLDEYQPGMFRQAQVSFASRIPVAFPAGDAISLSSSVVMYACNKNVD
LAIQHGRQRPQGVQRTSSVLIGLGRGKQSPNGLRLSIFTPNVLMISKHSDGSLNQWSVSF
AEGSAFSTVLSVSHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNVNVCNPIGHSRPGADS
SGQRKRLSLGPVSQDPNAIYSELILWRVDPVGPLSFSGGVSELARINSLHASAFSNVAWL
PTLIPSNCLGVYGNSPSACFVASDGHSLRLYQAVIEAKKLLSELSNPEISKYVGEVFNII
SQQSTARPGCIIELDAITDFQGKETQLLHVFEEDLILGKEKKDECSQELPAADNTSSPAL
FWARFFLVVIEFTPSRRSVLHMWHLQLTAAPVTMGETSSPADKDTVASSFMCNFHKDSPS
AHKSPLSRSNLQSACRLTLIKERVFSQELNLPEGVEVISATPAAGHLSSSSLQPTGRAPY
LLATSCTDGTVRFWSCRVVSDNEVISDASYIWEEWPLLVEDGLANSSAVNIPDRPVGISC
CHTNRVAVAYRDLKPSRLTKKPLIHVSIFQCESTGGSQWILEQTLELNVSLSLTNYDKHL
PVAGFQDETISTGDCLHSNGKSLVHLDWVSREDGSHILTVGLGSKLYMYGLLSQKPPELG
LSDISREHCFSRLVLLRVVDLVSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPA
ALAKSALNLGDANGGSMSSLNTALKQEGLNLQPPKRTLTRSMTSLAQKLSGKKTMYDLPP
EMEDYGLFEAAHHLFPTLPQYHPVQLLELMDLGKVRRAKAILSHLVKCIAGEIVTLKDTN
VNQERRLRSLTISAIGSTARDPKGMFSKTESSDYTEIDSIPPLPLYALLAADDDTAPCAK
GKTSSVSGDSGHGSSRADTYDELFQTSPVSLGDMDLLDGEEEDNKAKVIDLSKYSPTFFG
PEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTIASTSTDIRESQGKDQGGETLDECGLK
FLLAVRLHTFLLTSLPPVHRAQLLCQGLSTCHYTWAFHSDAEEELLNMLPCMQKGEPTWP
ELKAMGIGWWLRSTNKLRRCIEKVAKASFQRNNDPLDAALFYLAMKKKAVVWGLYRSHKN
VKMTAFFSNNFNEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDL
QLALVITRLYESEFETSSTYKKILQRYVLGHDHQIPVHPDPFLRSMAYWVLDDYSHALDT
LLEQPNQDGDALHKGTKESSPCNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTGQGSM
ADSISLMERRLFFTTANAHLQAGCPMLALDVLSKMPKVIKKSKMLHIQEKPSPTLSGPDN
PGSESRKDQASTLDWSQPIYNGFASVSDTLSSPQEDHSHSDSVLSFDWSQPSTTLQDEPL
ELKWDSDKEESDDEEAGLAMKKIQSESSAVVCEAPDSTSMSTDVIEEDSLVLFEDILAAR
LKFISCLKMLTAELRTLSTGYELDGGKLRHQLCHWLEREVMALQKCCGYNPYHRQLAGGI
SLELGQVSGASGDEREYQETAEQVREMQHRRRLWLQRNQPLLRIFLSYCSLHGSHGGGLA
SVRMELILLLQESQQDDSTQVPVQQQASVPLLLACTASSKTVVANPIAHLTNLTHDILHT
INALDSPPHPDITNNEIYVMHTLAASLSACIYQCLCDGHSYSHINQFTGTVYESILLSHQ
HPVRTLSMDEAAIPNTPPAQWPGVSTLVRLLGAAAEENQPSVGVLLCEILTAVFLSLFVH
GLATHSSNELFHIVAHPLNSKLWVVVFGGGARLPVAGKSSMASAPATNEDQDWKQKRFRL
PPSKSSSRDVPDSPVSPIGEQEASIFKERFVPPELSVWDYFIAKPFLPPSISQVEYDSEE
SQGSDEEEDDDDDDGFGDAFDPNSPLKEHSNNNSYSWCLMRVAMVQLVLVSLKSFYPMAG
YDLQDLPVCSPLCHSVMKTLQRWEQVLLKRLEIFGGPPSKFISTQPVDGTMASGPALLRH
KALFEPSNTPFRSRHHSALSVKRLWQYLVKQEEVQETFIRNIFAKKRDQTELVEDTDSMR
YSGMEEPGLNQIEAELGYPGGKARIIHKDSDIITAFSINKANRNCLVIASTHDIQELDVS
SILATQIMTWIDDEAESEVKGDDFLVVQTRDDFTTLHGTTPYTHSSPGTPINMPWLGSHQ
TGRGAAMLIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVT
RIRFNYQGNKFGIVDADGALSLWQTNTSGNTPKPYLTLQCHNKTAHDFVFVGSSSLIATA
GLSTDNRNVCLWDTLVMPSHSLVHGFSCHESGATVLALSPKQQLLLSGGRKGWISVLDLT
LKLQRQSFQAHDSAVKALAVDTTESCFISGSAEGNIKVWNMLTQSLLHTFPNEHARQSIF
RNLGTGVMQIETAPGNHIFSCGADGTMKMRVLPDCVSIYTNNVKNDVKFII
NT seq
8976 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccaccaagtactcactggggctgtcaaccccggagacaattgtttctttgtc
ggaagcataaacgatgtgccgttcacggcctatgcttctggttgtgacattgttatcttg
ggaagtgactttgagaggcttcagattatcccaggtgccaagcatggaaacattcaagtt
gggtgtgtgaactgctctcaacaaggacagattgctgcatcctatggaaacattgtttgt
atatttgaccctgtgctgatgagcccaaaggaaaagacgccaatgaaaccaaactatcac
tggcaaataacaggacagttcgatttacagtctaaagcacacatcattgcttggagcccc
acaggtacttgtcttttgactgggtcaggttgcctacagttatggtccactatgaatttc
tttggtggtgctgaagaagagatgggtagtgaccctttgtcttcttggaggtgtatatgg
cagtgcaacactgcctcacctgttcacctaattaagtttagtccagatggagagtttttt
gccactgcagggcaggatgactgtttggtaaaagtgtggtacagcatgaacaagtggcag
tatgatgccgcaaaactgttcactccaccagaactcggctctcaggggaagccggacttc
tccttcatctatctagctcatccgcgctcggtcactggcttctcatggaggaaaaccagc
aagtatatgcccagaggtgctgtgtgtaacgtgctactgacctgctgtaaggacagtgtg
tgtcgactatgggccgaaacactgctgcccagtgactgcctgctctctggactaagacaa
aatcacagcggcagcaacgatactctcaagtccagtaatctaaaaaaggctcaatgtaac
aacaaaggtcacagtcgaaatctgcctgagctgaacttggcagaaatgaatcgaggacca
gtcaggggtatggctcattcaaggcttcttcctcagcagcagaataaacattacacccac
agagccaccgtcgctcatgccaatgcactgtgccactttcacattgctgctagcatcaac
ccagccacagatattcctctgctgccctcaatatcttccctgagcggttcagatgatgag
gaaactggtggacccttcactgttcactggcttaacaacaaagaattgcacctgactctt
accatggaggtgttcctccagcagctccggagcagtatggagcatcagaatccaccacag
cctagccaggctgatgatgactgttatgaggagggcagtactatggcgcctgaaagcaga
aatgaagagatcatctttaaagacggatcctcaattcctctccctaaagctgcagtaatt
caccaggtggaggtgttacttagcgactggaacaggggagcagacatgctttttagcatc
caccctatggacgggtcgttgctggtttggcagatcgattggctagatgagtaccagccc
ggaatgttccgacaagcacaggtgtctttcgcatcccgaattcctgttgcctttcctgcg
ggtgatgctatctccctcagcagcagtgtagtgatgtatgcctgtaataaaaatgtggat
ttggcaatccagcatggtcgccagcgtccccaaggagtacaacgcacctcttccgttcta
attggtctgggccggggtaagcagtccccaaacggcctgcgcttgagcatcttcacgccc
aatgtactgatgatctcaaaacattctgatggctcactcaaccagtggtcagtgagcttt
gctgagggctcagccttctccactgtgcttagcgtctcacacaagtcacgctactgtggc
catcgcttccacctcaatgacctggcctgccactctgtactgcctctgctcctaacaact
tcacatcacaatgtcaatgtgtgcaaccccattggtcactcgaggcccggggcagactct
tcaggccaaagaaagcggttatccctaggacctgtttcccaggacccgaatgcaatttat
agtgaactaattctatggagggtggatccagtcggacccttgtcattttcagggggtgtg
tctgagctggccagaatcaactcgctccatgcatctgccttctctaatgtggcctggctt
ccaactctcatcccaagcaattgccttggtgtatatggcaactcgccaagcgcctgtttt
gtagcaagtgatggccattccctgagattgtatcaggcagtaattgaggctaagaaactg
ctgagtgaactctccaatcctgaaatatcaaaatatgtaggagaagtattcaatatcata
agtcagcagtctacagcgagaccaggctgcatcattgagctcgatgccatcacagacttt
caaggcaaggagacccagctgttacatgtgtttgaagaggacctgatcttgggaaaggag
aaaaaggatgaatgctcacaggagctcccagctgctgacaatacatctagcccggcactt
ttctgggcacgcttctttctggtggtgattgagtttaccccgagtaggagatcagtccta
catatgtggcacctgcagctgaccgcagctcctgttaccatgggcgagacctcaagccct
gctgataaagacactgtggcttcatcctttatgtgtaactttcacaaagactcaccatca
gcccataaatcaccacttagcaggtccaacctgcaaagtgcctgtcgcctcacattgatc
aaagagagagttttcagtcaggagctgaaccttccagaaggagttgaggttatatctgcc
acaccagctgcaggccatttaagctcgtcatctctgcagcctactggccgggccccatat
cttttagcaacatcctgtacagatgggactgtgaggttctggagctgtagagtagtctct
gacaatgaagtaatttctgacgcatcttacatctgggaggaatggcctttgctagtggag
gatggtcttgccaatagcagtgcagtgaacattcctgacaggcctgtgggcattagctgc
tgtcacactaaccgagtagctgtggcatacagggacttaaagccttccagacttaccaag
aagcccctcattcatgtgagtatattccagtgtgaatccaccggagggtcccagtggata
ttggagcagacacttgagctgaatgtttcgctcagtttgactaactatgataaacacttg
cctgtggctggctttcaggatgaaacaataagtactggggattgtttgcatagcaatggt
aaaagtcttgttcatctggactgggtttcaagagaggatggttctcatattttgactgta
ggtcttggttctaaactatacatgtatgggctgctctcacaaaaacctccagagctgggg
ctgtcggacatcagcagggagcattgcttttcacgtcttgttctgttgcgtgtagtggac
cttgtctcctctgtggagggctctttgccaatcccagtctcgctgtcttgggttagagat
ggcattcttgttgtcggcatggactgtgaaatgcatgtctactctcagtggcagcctgca
gcattagccaaatccgcactgaatttaggtgatgcaaatggtggcagcatgagctcactt
aatacagctctcaaacaagagggactgaatctccaacctcctaaaaggactcttaccagg
tcaatgactagtctggctcaaaagcttagtggtaagaagacaatgtatgaccttccacct
gaaatggaagactacggtttgtttgaggcagcccaccacttgtttcctaccctccctcaa
taccatccagtacagcttttggaactaatggacctgggcaaggtccgacgggccaaagct
attttgtcccatctggttaagtgcatagctggagagattgtgactctgaaggacaccaac
gttaatcaggaacgtcgtttaagatccctcactattagtgctattggcagtactgcccgg
gatcccaaagggatgtttagcaagactgagagctcagactacacagagatcgactccatc
ccaccattgcccctgtatgctctgcttgctgcagacgatgatacagccccctgtgctaaa
gggaaaacatccagcgttagcggcgacagcggccatggttccagccgagcagacacatat
gatgagcttttccagaccagccctgtgagcttaggtgacatggatctcttagatggtgag
gaggaggataataaagctaaggtcattgatctttcgaaatacagtcctactttttttggc
ccagagcatgcccaggttttgtcaagccacctgcttcactctagcttacctgggctgaca
cgaatggaacaaatgtcacttatggccttggctgacaccattgcctcaaccagcacagac
atcagggagagtcagggaaaagatcaaggtggagagactctggatgaatgtggcttgaag
ttcctacttgctgttcgtttgcacactttccttctgacatcattacctccagtgcatcgt
gcacagctactttgccaaggactgtctacatgtcactacacctgggcatttcactctgat
gctgaggaggaactgctcaacatgctgccctgcatgcagaagggagaacccacctggcct
gaattgaaagccatgggtattggctggtggctaaggagcactaataaacttcgcagatgc
attgaaaaggtagcaaaggcttctttccaaagaaacaacgatcccctggatgcagctctg
ttttatttggctatgaaaaagaaagctgtagtctggggactatacaggtcccacaagaat
gtaaagatgacggctttcttcagtaacaactttaatgaggaccgatggaggaaggctgca
ttgaagaacgcattctctctgcttggaaagcagaggtttcagcactcagcagctttcttt
ctgttggctggttccctcaaggatgctgttgaggtttgcttggagaagatgcaggacctg
cagttggctttggtgattaccagattatatgagtctgagtttgagacatcctccacttat
aagaagattctacagaggtacgtgctgggtcacgaccatcagattccagtgcacccggat
ccctttctacgtagtatggcatattgggttctagatgattacagtcatgctttggacacg
ttgcttgagcaacccaaccaggatggtgatgctttacacaaaggaaccaaagaatcatct
ccttgcaacccagaggttttcaacttttacacctacctcaggacacatccactgctcctt
cggcgccattttggatcctcagacaaagctaaagtgggcctgacgggacaggggagcatg
gctgattctattagtctcatggaaaggagactgttctttactactgctaatgctcactta
caagctggttgccctatgttagctctagatgtcctctccaaaatgcccaaagttattaag
aaatccaagatgctgcacatccaagagaagccctcaccaacacttagtggtcctgacaat
ccaggcagtgaaagtagaaaagatcaggcctctactcttgattggtcccagcctatttat
aacggctttgcgtctgtctcagacaccttatcttctccacaagaagatcacagccactca
gactctgttttgagctttgactggagtcagccatccacgacattgcaagatgagcctttg
gagctgaagtgggatagtgataaagaagaatctgatgatgaagaagctggcctagccatg
aagaaaatccagtcagagagttcagcagtcgtttgtgaggctcctgattcaacctccatg
tctaccgatgtcattgaagaagactcccttgtcctttttgaagacatcttagccgctcgg
ctcaagtttatttcatgtctgaagatgctgactgccgagctccggactctctccacaggt
tacgagctggacggtggcaagctgcgccaccaactgtgccactggctggagcgtgaggtg
atggccctccaaaagtgttgcgggtacaacccctaccatcggcagctggctggaggtatc
tcacttgagcttggccaagtaagtggtgcctctggagatgagagagagtaccaggagact
gcagagcaggtcagagagatgcaacacagacgcagactgtggcttcagagaaaccagcct
ctacttcgcatctttttaagctactgcagcctacatggttcacatggaggagggttggct
tcagtcaggatggaactaattcttcttcttcaggaatcccaacaggatgatagtactcag
gttcctgttcagcagcaagcatcagttcctcttttgctggcctgcactgcgagctccaaa
actgttgtagcaaatcctatagcacacctgaccaacctgacacatgacatactgcacacc
attaatgcactagactctcctcctcatccagacatcacgaacaatgagatttatgtgatg
cacaccctggcagcttctctgtctgcctgcatctaccagtgcctctgtgatggacacagt
tacagtcacatcaaccagttcacaggcactgtctatgagagcatactactttcccatcaa
caccctgtccgaactctgagtatggatgaagctgccattcccaacacccctccagcacag
tggccaggtgtcagtactttagttcgtctcttgggtgcagcagcagaggagaaccagcca
agtgtgggcgtgcttctgtgcgagatccttacagcagtcttcctcagcttgtttgtgcat
gggctggccacacactccagcaatgagctcttccacatcgtggctcatccactcaacagc
aagctgtgggtggttgtgtttggtgggggggctcgtctgcctgtagcaggaaaatccagc
atggcatcagctccagccacaaatgaagaccaggattggaagcagaagcgtttcaggctg
cctccttccaaaagcagctccagggatgtaccagacagcccagtcagccctataggagag
caggaggcgtccatttttaaagaacgctttgtgcctcctgaactcagtgtttgggactac
tttattgcaaagcctttcctgccaccgtctataagccaagttgagtatgattcagaggaa
agccaagggagtgatgaggaagaagatgatgatgatgatgatggttttggagatgcattt
gaccccaattctccacttaaagaacattccaacaacaattcatatagctggtgtttgatg
cgtgtggccatggtgcagttggtgctggtcagcttgaaatcattctatcctatggctggc
tatgatctccaggacctacctgtatgctccccactgtgccactcagtaatgaaaacgtta
cagcgctgggaacaggtgttgctcaaaagactggagattttcggtgggccgccttccaaa
ttcatttccacacaaccggttgatgggaccatggcgtctggaccagctcttctcagacac
aaggcattattcgaaccctctaacaccccattcaggtctcgacatcattctgcactttct
gttaagagactatggcagtacctggtaaaacaggaagaggttcaggagacttttatccgc
aacatctttgccaaaaagcgggatcagactgagttggttgaggacactgatagcatgagg
tattcaggaatggaggagcctggtcttaatcagattgaagcagaactgggttaccctgga
ggcaaagcacgtattatccacaaggattctgacatcatcactgccttctccattaataag
gccaatcgtaactgcttagtgattgcatctacccatgacatccaggagctggacgtgtcc
tccatcctggccactcagataatgacatggatcgatgatgaagcagagtcggaagtcaaa
ggtgatgacttcctggtggtccagacccgggatgatttcaccacgttgcatggcacaaca
ccctacactcacagcagccctggtactcccattaatatgccctggttaggcagccaccag
actggcagaggagcagccatgctgattaaacgaaacattaacaacgtcaggaggatgaca
tcccaccctaccctcccatattacctaacaggtgctcaggacggaagtgtgaggatgttt
gaatggggccattcacagcagattatctgctttaggagccctggcaactccagggttacg
aggatccgatttaactaccaggggaataagtttggtattgttgatgcagatggagctctt
agtctttggcagacaaatacatcagggaacaccccaaaaccgtacctgacattgcagtgc
cataataaaacagctcatgactttgtttttgtgggctcgtcatctctcattgccactgca
ggcctttccactgacaacagaaatgtatgtttgtgggatacactggtcatgccgtcgcat
agcctggttcatggctttagctgccatgagtcgggtgccactgtgctggctctttctcct
aaacagcagctgctgcttagcggaggcaggaaaggatggatcagcgtgctggacctcaca
ctgaagcttcagcgccagagcttccaggctcatgactcggctgtcaaagcgcttgctgtg
gacactacagaaagctgcttcatcagcggctcggctgagggcaacattaaggtgtggaac
atgttaacgcagagccttttgcacactttcccgaatgaacatgcccggcagtccatcttc
cgcaacctaggcacaggggttatgcagattgagacagcaccaggcaatcacatcttttct
tgcggtgctgacgggaccatgaaaatgcgtgtcctgcctgactgtgtcagcatctacacc
aacaatgtgaagaatgatgtaaagttcatcatttag
DBGET
integrated database retrieval system
