Clarias gariepinus (North African catfish): 128530517
Help
Entry
128530517 CDS
T10780
Symbol
abcf3
Name
(RefSeq) ATP-binding cassette sub-family F member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Translation factors [BR:
cgar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128530517 (abcf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
MMR_HSR1
AAA_23
NACHT
RsgA_GTPase
AAA
AAA_24
DUF1672
AAA_16
AAA_15
ATP-synt_ab
RNA_helicase
DUF5906
MeaB
Dynamin_N
TXNDC16_3rd
DUF87
Motif
Other DBs
NCBI-GeneID:
128530517
NCBI-ProteinID:
XP_053360482
LinkDB
All DBs
Position
1:15171381..15186988
Genome browser
AA seq
711 aa
AA seq
DB search
MATYVDILKNEFPEIDTEVFDYITGVLDSGGSDFEDGEEVFDAIGGVLQEVAAEKNEDDV
RDICLQLFNTLKISTNCNSNQRQVLLDAPVQLSQISAESESSVSDVQGIWMVKRAQGTTV
DAKKLEKAEAKLRAKHERRNEKDAQKPTNPLVLEEASASQASSKKESRVDMSGKNRSYDI
RIENFDVSFGERSLLQGAELCLASGRRYGLIGRNGLGKTTLLKMLASRSLRVPAHISILH
VEQEVDGDDTAALQSVLESDTVREELLTEERSLNAHIANGTAEGTESLRLSEIYAKLEEI
EADKAPARASVILAGLGFSPKMQQQPTKEFSGGWRMRLALARALFARPDLLLLDEPTNML
DVRAILWLENYLQTWQSTILVVSHDRNFLNAVVTDIIHLHSQRLDSYRGDYENFIKTKED
RLKNQQREYEAQLQYREHIQVFIDRFRYNANRAAQVQSKLKLLEKLPELKPIEKESDVSL
RFPDNFEKLSPPILQLDEVEFHYSAQQRLFTGLCVSADLESRICIVGENGAGKSTLLKLL
MGELTPVSGTRHAHRNLKIGYFSQHHVDQLDLNVCSVELLLSKFPGRTEEDYRRQLGRYG
ISGELATRPVASLSGGQKSRVAFAQMTMPCPNFYVLDEPTNHLDMETIEALAKSLNVFKG
GVVLVSHDERLIRIVCKELWVCEGGRVQRIDGGFDEYKNILQEQFRKEGYL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtacgtggacattctgaaaaacgagtttcccgaaatcgacactgaagtattt
gattatatcaccggagtgctggacagcggaggttcggattttgaggacggagaggaagtg
ttcgacgccatcggtggggttctgcaggaggtcgcagccgagaagaacgaagacgacgtc
cgagacatctgtctgcagctgtttaacacgctgaagattagcactaactgtaactctaac
cagaggcaggttctgctcgacgctcctgtgcagctttcgcagatctccgcagagtcagag
tcgtctgttagtgatgtgcagggcatttggatggtgaagagggcccagggcacgactgtg
gatgcgaagaagttagaaaaagccgaggccaagctgagagctaagcacgagcggaggaat
gaaaaagacgcacagaaacccacgaacccgctggtcctggaggaggcgtcggccagccag
gctagcagtaagaaggagagccgcgtggacatgtcggggaagaaccgcagctacgacatc
cggatcgagaacttcgacgtgtcgttcggagagaggtctctgctgcagggggccgagctg
tgtttggcgagcggtcgcaggtacggcctaatcgggagaaacggtctgggcaagaccacg
ctgctgaagatgctggcgagccgcagtctgcgcgtcccggcgcacatctccatcctgcac
gtggagcaggaggtggacggggacgatacggccgcgctgcagagcgtgctggagagcgac
acggtccgagaggaactgctcaccgaggagcgctcgctcaacgcacacatcgccaacgga
acagcggaggggactgaaagcctgcgtctgtccgagatctacgctaaactggaggaaatc
gaggcagacaaggcaccagccagagcttcagtgatcctggcaggtttaggattttcccct
aaaatgcaacagcaaccaaccaaagagttttctggtggttggaggatgagattagcgtta
gcacgagctctgtttgcaaggcctgatcttttgttacttgatgagcccaccaacatgttg
gacgtccgagccattctgtggttagagaattatttacagacgtggcagtcaaccatcctc
gtggtgtctcacgatcggaacttcctgaacgccgtagtaaccgacatcatccacctgcac
tcccagcgtctggacagttaccgtggcgattatgagaactttatcaaaacgaaagaggac
cgactgaagaaccaacaacgggagtacgaggctcagctacagtacagagaacacatacag
gtgtttatagacaggttcaggtacaacgctaacagagccgcgcaggtccagagcaagctg
aagcttttagagaaactccccgagcttaaacccatagaaaaggaatctgacgtcagttta
cggtttccggataactttgagaagctttctcctcccatcctgcagttagacgaggtggag
tttcactactcggcccagcagcggctgttcactggcctctgcgtctccgccgatctcgaa
tcgcggatctgcatcgtaggtgaaaatggagcgggaaagtccacgttattgaagctgctc
atgggcgagctgacacccgtaagcggcaccagacacgcccacagaaacctaaagattggg
tatttcagtcagcaccatgtagaccagctggacctcaacgtgtgttcagtggagctgctg
ctcagcaagtttcccggtcggaccgaggaggactacaggcgtcagctggggaggtacggg
atcagtggcgagttggcgacgcgacccgtggccagtctttctggaggacagaagagccgt
gtcgctttcgctcagatgaccatgccttgtcccaacttctatgtccttgacgagccgacc
aatcacctggacatggagaccatcgaagctcttgcaaagtcattaaatgtattcaagggt
ggcgtggtgttggtctcgcacgacgagcgcctcatccggatagtgtgtaaggagctgtgg
gtgtgtgaagggggtcgagtgcagcgcatcgacggcggcttcgatgagtacaagaacatc
ctgcaggagcagtttcggaaagaaggctacctgtga
DBGET
integrated database retrieval system
