KEGG   Clarias gariepinus (North African catfish): 128530571
Entry
128530571         CDS       T10780                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar00310  Lysine degradation
cgar01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    128530571 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgar04147]
    128530571 (plod1a)
Enzymes [BR:cgar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     128530571 (plod1a)
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128530571 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 Glycos_transf_2 DUF6951 PAP_RNA-bind
Other DBs
NCBI-GeneID: 128530571
NCBI-ProteinID: XP_053360573
LinkDB
Position
9:27909779..27921830
AA seq 733 aa
MKIRRITFWFGLLCLCAFSPLHCEPKGAIPEGNLLVLTVATKETDGFKRFMRSAKQFNYT
IKVLGRGEKWTGGDYMSAPGGGQKVRLLKAALDSIKEEDKVILFVDSYDVIFSSGPKELL
KKFQQARHKVVFSAETLIWPDRHLEDKHPHVREGKRFLGAGGFIGYALNLKQMVSDWSGQ
DDDSDQLFYTKIYINQEKRKSINITLDSKCRMFQNLHGALDEVVLKFENARVRARNVLYD
TLPVIVHGNGPTKLQINYLGNYIPKVWTFETGCTVCQEDLRPLSAIKESEYPGVVIGIFI
EQPTPFVTVFFERLLRLQYPKDRLKLFIYNQEPYHEKQVHAFLQNHEAEYQAVKLIGPHE
GVDHISSRNIGFDMCRDDADCEYFFSMDADVVLKNEDTLKILIELNKPFITPMMSKPGRL
WSNFWGALSADGYYARSEDYVDIVQGRRVGIWNVPYVSQVYLVRADVLRNELKASDLFQS
ATLDPDMAFCSRVRDQGVFMFVTNMYTYGRILNTEHYQTDHLHNDLWQIFENPVDWEERY
IHTNYSRIMKEDIVQTPCPDVFSFPIFTDVACEHMIEEMENFGQWSGGGNVDTRIQGGYE
NVPTIDIHMNQINFDKEWHKFLLDYIAPVTEKMFPGYYTKAQFDLAFVVRYKPDEQPALR
PHHDASTFTINIALNQVGVDFQGGGSHFLRYNCSVQDSKRGWALMHPGRLTHYHEGLRTT
SGVRYISVSFVDP
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgaagattcgaaggataacgttttggttcgggcttttatgcttgtgcgcattttccccg
ttacactgcgagccaaagggagcaatacctgagggaaatctccttgtattaactgtagct
acaaaagaaacagatggatttaagcgattcatgagatctgcaaagcaatttaattacaca
ataaaggttcttgggaggggtgagaaatggacgggtggagattacatgtctgcaccaggt
ggaggacagaaagtacgacttttaaaggctgctttagacagcataaaggaggaggacaaa
gtcattctttttgtagacagctatgacgttatattctcttcgggccctaaagaattgctg
aagaagttccagcaggccaggcacaaggtggtcttttccgccgagacccttatctggccc
gatcgtcatctggaggataagcacccacatgtccgagaagggaagcggtttctcggggca
ggaggctttatcggctatgccctgaaccttaaacagatggtctctgattggtcaggacaa
gatgatgacagtgatcagctcttttataccaagatctacatcaaccaagaaaagaggaaa
tccataaatataacccttgacagcaagtgcagaatgtttcagaacctgcatggagctcta
gatgaagtggtactgaagtttgagaatgcaagagtacgggccagaaatgtgctctatgac
accctacctgttattgtccatggaaatgggcctacaaagcttcagataaattaccttggc
aactacatcccaaaagtgtggaccttcgagactggctgtacggtttgccaggaggacctg
cggcctctttcagcaatcaaggagagcgagtatccaggagtggtcataggcatttttatt
gagcagcccacccccttcgtaacggtcttctttgagcgccttctccgtctccagtacccc
aaagatcgccttaaactcttcatttacaatcaggagccctatcatgaaaagcaggtccac
gcttttctacaaaatcatgaagcagagtaccaggctgtgaagctgatcgggccccatgag
ggagttgaccacattagctcacgcaatatcggctttgatatgtgtcgagatgatgcagac
tgcgagtacttcttcagtatggatgctgatgtggttttgaagaatgaagacacactgaag
atactaattgagttaaataagccgttcataacaccgatgatgagcaagcctggccggctg
tggtctaatttctggggcgcacttagtgctgatggctactacgccaggtctgaggactat
gtggatattgttcaggggcgcagagtgggtatctggaacgttccatatgtgtctcaggtg
tacctggtgagagctgacgttctgaggaacgaactaaaggcttctgatctctttcagtca
gccacccttgacccagatatggctttctgctccagagtgcgggaccagggagtgttcatg
ttcgtaacaaacatgtatacttatggccgaatcctgaatacagaacactaccagacggat
caccttcacaacgatctctggcagatttttgaaaacccagtggactgggaagagcgatac
atccatacaaattactcaagaattatgaaagaggatatagtgcaaacgccatgccctgat
gtgttctcgtttcctattttcaccgatgtggcctgtgaacacatgatcgaagaaatggaa
aatttcggccagtggtcaggaggtggcaatgtggacactcgaatccagggtggctacgag
aacgttcccactatcgatattcatatgaatcagatcaactttgataaagagtggcacaag
ttcctcttggattatattgcaccagtgacggagaaaatgtttcctgggtattacacaaag
gctcagtttgacttggcgtttgtggttcggtataaacctgacgaacagcccgcgttaagg
ccccatcatgacgcttcaacatttactataaatattgccctcaatcaagtgggcgttgat
tttcagggcggtggctcccacttccttaggtacaactgctccgttcaggattcaaagaga
ggctgggcccttatgcacccgggccgtttaacacactaccacgagggcctgcgcaccacg
agcggtgtccgatacatctccgtctcatttgtggacccttaa

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