Clarias gariepinus (North African catfish): 128530572
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Entry
128530572 CDS
T10780
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128530572 (mkrn4)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128530572 (mkrn4)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128530572 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-RING_2
zf-CCCH_DUS3L
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-RING_UBOX
zf-CCCH_3
IBR_1
zf-C3HC4_2
RING_XB3-XBAT31
zf-CCCH_2
zf-rbx1
zf-RING_11
zf-UDP
Motif
Other DBs
NCBI-GeneID:
128530572
NCBI-ProteinID:
XP_053360574
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All DBs
Position
9:complement(15896872..15902514)
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AA seq
395 aa
AA seq
DB search
MAVCGASQRRSGKRGLNLRSRICRQFINGSCRFGQHCSYLHEYPVVPSVQVCRYFQKGGC
WFGENCRYLHIAGPDSGSSGARRGSAPVVHASAIPGNVSSARRGSEPSLFPELGAYSWRR
RGSEPVVTSLSLQQTSQRPTTDIAEEEEHAVLEAESILPQRKERIQPQESNEPCPKPLTG
NSVDNSMVVASDQQKTNSKTDQKGINLQESGAAASVDHGQSEAYNQSKDVSCGICMDKVY
EKSTVRERRFGILPNCSHAFCLGCIMTWRKTKDFQEEVIKACPQCRVKSSFYIPSKYWVC
EGEPKEALIASFKEKSSKIKCNFFMRHGCCPFASECIFSHELPPGHRPQRRYFRPKNALE
LLEEMDSEDQRLLSYLIALTFLDDEDFDFIQFELV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctgtggggcgtcgcagagacgttcgggcaaacgtgggcttaacttgagaagc
cggatttgcaggcagtttataaacggctcctgcaggtttggtcagcactgctcttacctg
catgaatatcctgttgtgccatcagttcaagtgtgcaggtacttccagaaaggaggttgc
tggtttggagaaaactgccggtatcttcatattgctggtcctgacagtgggtcttctggt
gcaaggcgtggctcggcacctgtagttcatgcttctgctatcccaggtaatgtgtcttct
gctcgacgtggttctgagccttcacttttccccgagctgggtgcatacagctggaggcga
agaggttctgaacctgtggtcacaagtttaagcctccagcagacttcacaacgtccaact
acagatattgctgaagaggaagagcatgcagtgttggaagcggagtctatacttccgcag
cgaaaggagcggatccagccacaggagagtaatgagccatgtcccaaacctttaactggc
aatagtgtggacaattctatggttgttgcatctgatcaacagaaaactaattctaaaaca
gaccagaagggaatcaatttgcaggagagtggtgcagcagcttcagtggatcatggacaa
tctgaggcctacaatcaaagcaaggatgtttcctgtggcatctgcatggacaaggtttat
gaaaaaagcacagtacgagaaaggcgctttggaatcttgcctaactgcagtcatgccttc
tgtcttggctgcatcatgacctggcgaaagaccaaagactttcaagaagaggtcatcaaa
gcctgtccacagtgcagagtgaagtcctctttttacattcccagcaagtactgggtttgt
gaaggtgagccgaaggaagcactgattgcttcatttaaagaaaagagcagtaaaataaag
tgcaatttcttcatgcgtcatggatgctgcccctttgcgtcggagtgcatctttagccat
gagctaccacctggacacagaccccagcgtagatattttaggcccaagaatgctttggag
ttgctggaggaaatggatagtgaggaccaacgacttttgagctatctaattgccctgacc
tttttggatgacgaggactttgattttatccaatttgagctggtttga
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