Clarias gariepinus (North African catfish): 128530594
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Entry
128530594 CDS
T10780
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03272
Virion - Hepatitis viruses
cgar04382
Cornified envelope formation
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128530594 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128530594 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128530594 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128530594 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128530594 (cldn5a)
04147 Exosome [BR:
cgar04147
]
128530594 (cldn5a)
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128530594 (cldn5a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
128530594 (cldn5a)
Exosomal proteins of colorectal cancer cells
128530594 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
128530594
NCBI-ProteinID:
XP_053360602
LinkDB
All DBs
Position
9:complement(19487614..19489580)
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AA seq
218 aa
AA seq
DB search
MASAALELLGLILAVFGTLLEMIACGLPTWKVAAHIEANIVVSQTIWDGLWMSCAVQSTG
QMQCKVHDSMLALSSDLQVARALTVVSSVLCVLALLAVIAGAQCTNCIRAELVKVRVVNF
GGALYIVSAVLVLVPLCWMANKIIADFYNPHVPPAQKREMGAALYIGWAAAGLLLLGGSV
LCCSCPPSSAAGAGYSINYAPTKRAPTSNGDYDKRNYV
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggctctggagcttctcggcctgatactagccgtgtttggcacgctgctg
gagatgatcgcatgcggtctgcccacgtggaaggtggcggcgcacatcgaggccaacatc
gtggtgtcgcagaccatctgggacggcctgtggatgtcttgcgctgttcagagtacgggc
cagatgcagtgtaaggtgcacgactcgatgctggcgctcagcagcgacctgcaggtggcg
cgcgcactgactgtagtctcgtccgtgctgtgcgtgttggcgctgctggccgtgatcgcc
ggagcgcagtgcaccaactgcatccgtgccgagctcgtcaaggtgcgagttgtgaacttc
ggtggagcgctctacatcgtcagcgccgtgctggtgctcgtgcccctctgctggatggcc
aacaaaatcatcgccgatttttacaacccgcacgtgcccccggcccagaagcgcgagatg
ggggccgcgctgtacatcggctgggcggccgcggggctcctactgctgggcggctcagtg
ctctgctgctcgtgtccgccatcatcagcggccggggcgggttactccatcaactacgca
cccacaaaaagagcgcccacatccaatggagactacgataagaggaactacgtctaa
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