Clarias gariepinus (North African catfish): 128530616
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Entry
128530616 CDS
T10780
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00531
Glycosaminoglycan degradation
cgar01100
Metabolic pathways
cgar04142
Lysosome biogenesis
Module
cgar_M00076
Dermatan sulfate degradation
cgar_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
128530616 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
128530616 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cgar02042
]
128530616 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128530616 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128530616 (si:dkey-72l14.3)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
128530616 (si:dkey-72l14.3)
Bacterial toxins [BR:
cgar02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
128530616 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Enzymes
128530616 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Enzymes
128530616 (si:dkey-72l14.3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
128530616
NCBI-ProteinID:
XP_053360639
LinkDB
All DBs
Position
9
Genome browser
AA seq
513 aa
AA seq
DB search
MDHKGSFNPLIPFILLLFASCLCLNGPARSPLLPGQPFLILWAVPNKDCVGRPDPAAFGM
ELEDRVAEFNEDSLGLYPYFSSEGVPMNGGLPQHTSLERHLQKLEWDLTATLPQAGAPGL
GVLRWNEWEPQWSRNRGNQRRYLETSRALLRGFFPDWNTDEVEKWAQVDFQAAAQFILME
TLIELKRLRPQRLWGMASYPSCYNSNPVQMLLANYTGHCPAAEMALNDELMWLWKQSNAL
YPILALEKLPEGTKGAWLYASNQIREALRVAALAGTTFELPVFPLVKSMYTSSSDFLSEA
CLVNTVGESAAMGAAGVIIWDRFHTTKTQKLCSDLTSYVREVLGPYAVNVTTATRLCSMS
LCKGRGRCVRKKSEDPIYLHLPPAHFLLQRQDEDSIRATGQLPPNYLDGWRRDFQCHWFE
ALEGAAADQESIGTESGGQWSMPTERPPSIVVHTVGTHGQNEGTEKTLEKIKGIEAPMMP
DGQEPSKSGCPAHFVTIMLFCVLPFLSPTNLDF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaaaggatccttcaaccccctcatcccttttattctgctcctctttgcctcc
tgtttgtgtcttaatgggccagcccgctctcctctcctgcctggtcagcctttcctgatt
ctttgggctgtaccaaacaaggactgtgttggtcgccctgacccagcagctttcgggatg
gagttggaggatcgcgtggctgagtttaatgaggactcattgggactatacccatatttc
agttcagagggagtgcctatgaatggtgggctgccccagcataccagcctggagcgccac
ctgcaaaaattggaatgggaccttacagcaactttgccgcaggctggggcgcctggcctt
ggggtgctgaggtggaacgagtgggagccgcagtggagcagaaaccggggtaatcagcgg
aggtatttggagacatcgcgagcattgcttcggggttttttcccagactggaacacagac
gaggtggagaaatgggctcaggtggactttcaagctgcagcccaatttattctcatggag
accctgatagagctaaaaagactccgcccacagagactgtggggcatggcttcgtaccca
agctgctacaactctaatcctgttcagatgctgctagctaattacacaggccactgccct
gctgcagagatggcactaaacgatgaactaatgtggttatggaagcaaagcaatgcactt
taccccatccttgcactggagaaactccctgaaggaaccaagggtgcatggctgtatgca
tccaatcagatcagggaagcattaagagtggctgctctagcagggacaacatttgagctt
cccgtttttccactggtcaagagtatgtacacctcctccagtgactttctctctgaggct
tgtttggtgaatactgtaggagaaagtgctgctatgggtgcagcaggagtcattatctgg
gacagattccatacaactaaaacacagaagttgtgctctgatcttacctcgtatgtgcga
gaggttcttggcccctatgctgtcaacgtaaccacagcgacacgtctttgcagcatgtca
ctttgcaagggccgggggcgctgtgtacgcaagaaatcagaagaccctatataccttcac
cttcctcctgctcactttttgctgcagcgccaggatgaagacagcatccgagcaacaggg
caactccccccaaactacctggatgggtggagaagagactttcagtgccattggtttgag
gctttggaaggagcagctgctgatcaggagtcaattggcaccgagagtggtggtcagtgg
tccatgcccactgaaaggccacccagtattgttgttcatactgtgggaacacatggacaa
aatgaagggacggagaaaacactggagaaaattaaagggatagaggctcctatgatgcca
gatggacaagaaccgtcaaaaagtggctgccctgcccacttcgtgaccatcatgcttttt
tgtgttctgccattccttagccccacaaacctagacttctaa
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