Clarias gariepinus (North African catfish): 128530643
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Entry
128530643 CDS
T10780
Symbol
calr
Name
(RefSeq) calreticulin
KO
K08057
calreticulin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04141
Protein processing in endoplasmic reticulum
cgar04145
Phagosome
cgar04148
Efferocytosis
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128530643 (calr)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128530643 (calr)
04148 Efferocytosis
128530643 (calr)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128530643 (calr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cgar03110
]
128530643 (calr)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cgar04091
]
128530643 (calr)
Chaperones and folding catalysts [BR:
cgar03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
128530643 (calr)
Lectins [BR:
cgar04091
]
L-type lectins
128530643 (calr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DDHD
Motif
Other DBs
NCBI-GeneID:
128530643
NCBI-ProteinID:
XP_053360668
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All DBs
Position
9:complement(14226313..14232782)
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AA seq
424 aa
AA seq
DB search
MTTFWLLLLSVSIALVTAEPSVYFREQFEDGDAWKSRWLESTHKSDYGKFVLSAGKFYGD
AEKDKGLQTSQDAHFYAISSRFEDFSNKDQPLVLQFTVKHEQGIDCGGGYIKLFPSSLKQ
EEMHGDSTYNIMFGPDICGPGTKKVHVIFNYKGKNHLINKDIRCKDDEFSHLYTLIVNPD
NTYEVKIDNKKVESGSLEDDWDFLPPKKIKDPDAKKPEDWDEREKIDDPDDKKPENWDKP
ETIPDPDAKKPDDWDEEMDGEWEPPMVTNPEYKGEWKPKQIDNPAYKGKWVHPEIDNPEY
TADSEIYKYSSIGVIGLDLWQVKSGTIFDNFFITNDPKLAEEVGNETWGATKDAEKKMKD
RQEEEERKKREEDDKKISEEAKDEADEEEKDEEEDEEEEEEEEEGEDEEDEEEEGTDSQL
KDEL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgttctggttgcttctcttaagcgtatcaatcgccttagtaactgcagaaccg
tccgtttatttcagagagcagtttgaagacggggatgcttggaaaagccgatggctggaa
tccacccacaaatccgactatggcaagtttgtgctgtcagccggcaaattttatggagat
gcagagaaagacaagggccttcaaaccagccaggatgctcacttctatgccatctcatct
cggtttgaggacttcagcaataaggaccagccactggtcttgcagttcacagtgaaacat
gagcaaggaatagattgtggaggaggctacattaaacttttcccatcaagcctaaagcaa
gaggaaatgcatggagattccacatacaatataatgtttggtcctgatatctgtggccct
ggcactaaaaaggttcatgtcatcttcaattataagggcaagaatcacttaatcaacaaa
gacatcaggtgcaaggatgatgaattctcccacctgtacacgctcatcgttaatccagac
aacacgtatgaggtgaagatcgacaataagaaggtggagtctggatctcttgaggatgac
tgggactttttgccaccaaagaagatcaaggatccagatgcaaagaagcctgaggactgg
gatgagcgagagaagatcgatgaccctgacgataaaaagccagagaactgggacaaacct
gagaccatccctgatcctgatgctaaaaagcctgatgactgggatgaagagatggatgga
gaatgggagcctcccatggttaccaaccctgagtacaagggtgagtggaagccaaagcaa
atcgacaatcctgcctacaaaggtaaatgggtgcaccctgaaattgacaaccctgaatac
actgctgattctgagatctacaaatacagcagcattggagtgattggattggacttgtgg
caggtaaagtctggaacaattttcgacaactttttcattacaaatgacccaaaactggct
gaggaggttggcaatgaaacttggggtgcaacaaaggatgctgaaaaaaagatgaaggat
agacaagaggaagaagagagaaagaaacgtgaggaagacgacaaaaaaataagtgaagaa
gccaaggatgaagcagatgaagaagaaaaagatgaagaagaagatgaggaggaggaagag
gaggaggaggagggggaggatgaagaagatgaggaggaggaaggaacagactctcaactt
aaggatgagttgtag
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