Clarias gariepinus (North African catfish): 128531213
Help
Entry
128531213 CDS
T10780
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04148
Efferocytosis
cgar04218
Cellular senescence
cgar04310
Wnt signaling pathway
cgar04625
C-type lectin receptor signaling pathway
Brite
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
128531213 (nfatc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
128531213
NCBI-ProteinID:
XP_053360984
LinkDB
All DBs
Position
1:complement(51864284..51877329)
Genome browser
AA seq
775 aa
AA seq
DB search
MSSGWEEGELDFTLIFEEEQQLQDTTATDNQLTSTNCQPMGILPSPPPSNHRAGMHSPPP
RRALVREFSGTYESLPARSVQVSESRVLECPSIQITTISPDDDFTPEGGTYWDRDRLYLP
LLDPFGYRDSSMGAGSLSPSPASSPSSRGWLSPASSCDSLLVEDEELSEATTHFCLSPSS
RPTSPGGKKRRNSPLPSPSHSRRGSYSEDPVQFLEMGDSAPQSQGLIELSIPQKTRKTSL
EQVSSRDVELEQIPAPNTNCPPSDLGQLRREPPTLGMDYLSVPNTLGWGRTRASAHSPIF
RSNALPPLDWPLPCQFDQYELRIDVQPRPHHRAHYETEGSRGAVKASPGGHPVVKLVGYT
ERQPLSLQVFVGTADDRSIRPHPFYQIHRVTGKMVGTASQESMQAGTKLLEIPLNPETNM
TALIDCAGILKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPLGPPGRVLALQVAS
QPIECSQRSAQELPIIESISVTSCLAEGGAELLVHGSNFLPTSRVLFMERGTDGKLQWEE
EAHVDRDKSTENVLCVRVPAYSDVCVSQPVCVCLYVSNGKRKRSSTHCFKYLPMLCKEED
PLLSRPSLLLLDGVMSLCPPPHPPEYPYSTPGGYHHHHHHQHHHQHHHQQEFCPLPETSE
DRVAVSECDPSFQSLELGFSELLPPLYPPQPWPDSPYLSSSPSPSHSSSISPFPSSPVST
SPLPPPLLPHAPPAYHQESHMTFSSAPPMQHITLDEVNEFIGEDIRTFHTDSRPA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgggctgggaggaaggagagctggacttcacactcatcttcgaggaggagcag
cagctccaggacaccacggccaccgacaaccaactgacctccacaaactgccagccaatg
ggaatcctgccttctcctccaccatccaatcacagggcaggcatgcattctccgcctccc
agacgagcactggtgagagagttcagcgggacgtatgagagtcttccggcccggtcagtc
caggtctcggagtctcgtgttttggagtgtcccagtattcagatcaccaccatttctcct
gacgatgattttaccccagaagggggaacttactgggacagagaccgtctctacttgcct
ctgctcgacccctttggttatcgggacagcagtatgggggcggggtctttgagccctagt
cctgcctccagcccatcctctcgtggttggctaagccctgcatcgagctgtgactctctg
ctggtggaagatgaggaacttagcgaagccactacccacttttgcctatcgccgtcatca
cgtcccacctcacccgggggcaaaaaacggagaaactcccctcttccctcaccaagccac
tcccgcaggggcagctactctgaagaccctgtccaattcttggagatgggagactccgcc
cctcaatctcagggtctgatcgagctcagtattcctcagaagaccaggaagacctcattg
gagcaggtctcctcccgagacgtggaactggaacagattcctgccccgaataccaactgc
ccaccctcagacctagggcaactcaggagggagcctcccacactggggatggactacctc
tctgtaccgaacacccttggctgggggagaacccgcgccagcgcccacagtcccatcttc
aggtccaacgcgctgccgccgctcgattggccgctgccgtgtcagttcgatcagtacgag
ttgcggatcgacgttcagccgcgtcctcaccatcgcgctcattacgagacagagggaagt
cgaggagcggtgaaggcgtcgccaggaggacatcctgtagtgaagctggtggggtacacg
gagcgtcagccgctgtcactacaggtttttgtaggaaccgcagacgacagatcgattcgt
ccgcatccgttttatcagatccacagggtgacggggaagatggtcggcacagcgagtcag
gagagcatgcaggctggaaccaaactgttggagatccctttaaacccagaaaccaacatg
acagcacttatcgactgtgcggggatcctgaagctgaggaactcagatatcgagctgagg
aaaggagagacagacgtcgggaggaagaacactcgcgtgcgattggtcttcaggactcac
ctgcctttagctccgccccttggcccacctggccgagtgttagcgctgcaggtggcgtct
cagcccatagagtgctctcagcgctcagctcaggagttacccatcatcgagtccatcagt
gtcacttcctgtttggctgaaggaggggcggagcttctcgttcatggcagcaacttcctg
cccacctccagggtgctgtttatggagcgagggacagatggtaaactgcaatgggaggaa
gaggctcatgtggaccgtgacaaaagcacagagaatgtgttgtgtgtacgtgtgccagcc
tacagtgatgtgtgtgtgagtcagccggtgtgtgtgtgcctgtatgtgtccaacggcaag
cgcaagaggagcagcacacactgctttaaatacctacccatgctgtgtaaagaggaagac
cctctgttgtctcgtccgtctctcttgctgttggatggagtgatgtcgttgtgcccgccc
cctcaccctcctgagtacccgtacagcacgccaggggggtaccaccaccaccaccaccac
cagcaccaccatcagcaccaccaccagcaggagttctgccccctgcccgagacgtcggag
gacagggtggcggtgtccgagtgcgatccctcgttccagagcctggagttgggtttcagt
gagctgctcccgccgctgtacccgccccagccctggcccgactctccgtacctgtcctcc
tcaccttccccttctcactcctcctccatcagtccgtttcccagcagccccgtctccacc
tcccccctcccccctcctctcctgccccatgccccccctgcctaccaccaggagagtcac
atgaccttcagcagcgccccacccatgcagcatatcacgctggatgaagtgaacgagttc
atcggtgaggacatcaggacgtttcacacagacagcagacctgcgtaa
DBGET
integrated database retrieval system
