Clarias gariepinus (North African catfish): 128531213
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Entry
128531213 CDS
T10780
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04148
Efferocytosis
cgar04218
Cellular senescence
cgar04310
Wnt signaling pathway
cgar04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128531213 (nfatc4)
04020 Calcium signaling pathway
128531213 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128531213 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
128531213 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128531213 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128531213 (nfatc4)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
128531213 (nfatc4)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
128531213
NCBI-ProteinID:
XP_053360984
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Position
1:complement(51864284..51877329)
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AA seq
775 aa
AA seq
DB search
MSSGWEEGELDFTLIFEEEQQLQDTTATDNQLTSTNCQPMGILPSPPPSNHRAGMHSPPP
RRALVREFSGTYESLPARSVQVSESRVLECPSIQITTISPDDDFTPEGGTYWDRDRLYLP
LLDPFGYRDSSMGAGSLSPSPASSPSSRGWLSPASSCDSLLVEDEELSEATTHFCLSPSS
RPTSPGGKKRRNSPLPSPSHSRRGSYSEDPVQFLEMGDSAPQSQGLIELSIPQKTRKTSL
EQVSSRDVELEQIPAPNTNCPPSDLGQLRREPPTLGMDYLSVPNTLGWGRTRASAHSPIF
RSNALPPLDWPLPCQFDQYELRIDVQPRPHHRAHYETEGSRGAVKASPGGHPVVKLVGYT
ERQPLSLQVFVGTADDRSIRPHPFYQIHRVTGKMVGTASQESMQAGTKLLEIPLNPETNM
TALIDCAGILKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPLGPPGRVLALQVAS
QPIECSQRSAQELPIIESISVTSCLAEGGAELLVHGSNFLPTSRVLFMERGTDGKLQWEE
EAHVDRDKSTENVLCVRVPAYSDVCVSQPVCVCLYVSNGKRKRSSTHCFKYLPMLCKEED
PLLSRPSLLLLDGVMSLCPPPHPPEYPYSTPGGYHHHHHHQHHHQHHHQQEFCPLPETSE
DRVAVSECDPSFQSLELGFSELLPPLYPPQPWPDSPYLSSSPSPSHSSSISPFPSSPVST
SPLPPPLLPHAPPAYHQESHMTFSSAPPMQHITLDEVNEFIGEDIRTFHTDSRPA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgggctgggaggaaggagagctggacttcacactcatcttcgaggaggagcag
cagctccaggacaccacggccaccgacaaccaactgacctccacaaactgccagccaatg
ggaatcctgccttctcctccaccatccaatcacagggcaggcatgcattctccgcctccc
agacgagcactggtgagagagttcagcgggacgtatgagagtcttccggcccggtcagtc
caggtctcggagtctcgtgttttggagtgtcccagtattcagatcaccaccatttctcct
gacgatgattttaccccagaagggggaacttactgggacagagaccgtctctacttgcct
ctgctcgacccctttggttatcgggacagcagtatgggggcggggtctttgagccctagt
cctgcctccagcccatcctctcgtggttggctaagccctgcatcgagctgtgactctctg
ctggtggaagatgaggaacttagcgaagccactacccacttttgcctatcgccgtcatca
cgtcccacctcacccgggggcaaaaaacggagaaactcccctcttccctcaccaagccac
tcccgcaggggcagctactctgaagaccctgtccaattcttggagatgggagactccgcc
cctcaatctcagggtctgatcgagctcagtattcctcagaagaccaggaagacctcattg
gagcaggtctcctcccgagacgtggaactggaacagattcctgccccgaataccaactgc
ccaccctcagacctagggcaactcaggagggagcctcccacactggggatggactacctc
tctgtaccgaacacccttggctgggggagaacccgcgccagcgcccacagtcccatcttc
aggtccaacgcgctgccgccgctcgattggccgctgccgtgtcagttcgatcagtacgag
ttgcggatcgacgttcagccgcgtcctcaccatcgcgctcattacgagacagagggaagt
cgaggagcggtgaaggcgtcgccaggaggacatcctgtagtgaagctggtggggtacacg
gagcgtcagccgctgtcactacaggtttttgtaggaaccgcagacgacagatcgattcgt
ccgcatccgttttatcagatccacagggtgacggggaagatggtcggcacagcgagtcag
gagagcatgcaggctggaaccaaactgttggagatccctttaaacccagaaaccaacatg
acagcacttatcgactgtgcggggatcctgaagctgaggaactcagatatcgagctgagg
aaaggagagacagacgtcgggaggaagaacactcgcgtgcgattggtcttcaggactcac
ctgcctttagctccgccccttggcccacctggccgagtgttagcgctgcaggtggcgtct
cagcccatagagtgctctcagcgctcagctcaggagttacccatcatcgagtccatcagt
gtcacttcctgtttggctgaaggaggggcggagcttctcgttcatggcagcaacttcctg
cccacctccagggtgctgtttatggagcgagggacagatggtaaactgcaatgggaggaa
gaggctcatgtggaccgtgacaaaagcacagagaatgtgttgtgtgtacgtgtgccagcc
tacagtgatgtgtgtgtgagtcagccggtgtgtgtgtgcctgtatgtgtccaacggcaag
cgcaagaggagcagcacacactgctttaaatacctacccatgctgtgtaaagaggaagac
cctctgttgtctcgtccgtctctcttgctgttggatggagtgatgtcgttgtgcccgccc
cctcaccctcctgagtacccgtacagcacgccaggggggtaccaccaccaccaccaccac
cagcaccaccatcagcaccaccaccagcaggagttctgccccctgcccgagacgtcggag
gacagggtggcggtgtccgagtgcgatccctcgttccagagcctggagttgggtttcagt
gagctgctcccgccgctgtacccgccccagccctggcccgactctccgtacctgtcctcc
tcaccttccccttctcactcctcctccatcagtccgtttcccagcagccccgtctccacc
tcccccctcccccctcctctcctgccccatgccccccctgcctaccaccaggagagtcac
atgaccttcagcagcgccccacccatgcagcatatcacgctggatgaagtgaacgagttc
atcggtgaggacatcaggacgtttcacacagacagcagacctgcgtaa
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