Clarias gariepinus (North African catfish): 128531427
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Entry
128531427 CDS
T10780
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128531427 (smarcd3a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128531427 (smarcd3a)
PBAF complex
128531427 (smarcd3a)
GBAF(ncBAF) complex
128531427 (smarcd3a)
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GFIT
Other DBs
NCBI-GeneID:
128531427
NCBI-ProteinID:
XP_053361230
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Position
1:complement(39677484..39716971)
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AA seq
505 aa
AA seq
DB search
MATEDSTGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPTLDPNRKRPTTTPPVQTTSTQNRPRKKPVGFQGANEVSARPLDLREAQPEPAVGSNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKQVDIQEALKRPMKQKRKLR
LYISNTFNPAKPDSEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHEKEYISCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDP
IVINHVISVDPNDHKKTACYDIDVEVDDPLKTQMNGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDVAGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQTLAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggattctactggcggcgctcgcaaagccaccaagagtaaactgtttgag
tttctcgtccatggagtgcgtccaggtatgacatcaggagcccggatgccccatcaaggt
gcccctatgggtccacctggccccccgtatggaggaacgcccccaattcggccagggatg
cccaatcccaccttggacccaaaccgcaaacggcccaccaccaccccaccggtgcagacc
acatccacccagaaccggcctagaaagaaaccagtgggattccaaggagccaatgaggtt
tctgcaagaccgttggacttgcgagaggcccagcctgagccagcagttggatccaatgcc
aagagaaggaaaatggcagacaagattctccctcagaggatccgtgagctggtgcccgag
tcgcaggcgtacatggaccttttggctttcgagcgcaaattggaccaaacgattatgagg
aagcaggtggatattcaagaggccctcaagagaccgatgaagcaaaagcggaagctccga
ctgtacatctcgaatacgtttaacccagctaagccggattcggaggactccgagggcagc
attgcatcctgggagctaagagtggaaggaaagttgctagatgatcctggaaagcaaaag
aggaagttctcttctttcttcaagagcctggttattgagctggataaagacctgtatggc
cctgataaccacttagttgagtggcatcgcactgccacaacccaggagacggatggcttc
caagtcaagaggccaggagatgtgaatgtccgctgcacgctgctgctcatgctcgattac
cagccaccccaatttaagctggaccctcgtcttgctcgccttctgggcatccacacacag
acccgttcctgcatcatccaggctctctggcagtatgtcaagactaacaagctgcaggac
tcccacgaaaaggaatacattagctgtgacaagtatttccagcagatctttgactgtccc
cgtctgaagtttagtgagattcctcagaggctcactaacctgctgctgccaccagaccca
attgtgatcaaccatgtcatcagcgtggaccccaatgaccacaagaagacagcctgttat
gacatagatgttgaggtggacgatcctttgaagacccaaatgaatggttttctgctctca
actgctaatcagcaggaaatagcgtcactggataacaagatccatgagaccattgagtcc
atcaaccagctaaagatccagagagatttcatgctcagtttctccagagatcccaagggc
tatattcaggattggatttgttcacaaaatagagatcttaagctgatgactgacgtggcg
ggaaacccagaggaagaaagaagagcagagttttataaccagccctggtctcaagaagct
gtgagtcgctacttttactgcaagatccaacaacgaagacaagaactggaacagaccttg
gcgatgcgtaccacttaa
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