Clarias gariepinus (North African catfish): 128531442
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Entry
128531442 CDS
T10780
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128531442 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128531442 (cstf2)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128531442 (cstf2)
U7-dependent histone pre-mRNA processing factors
128531442 (cstf2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
128531442
NCBI-ProteinID:
XP_053361261
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All DBs
Position
10:complement(16695064..16703041)
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AA seq
518 aa
AA seq
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MANVATAVAAAAGRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRET
GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIES
PYGDSCPAEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALL
QAQVVMRIVDPEIALKMLHRQASVQPINPNNQSGPLPVSNQPHAQPSAPVSQPQPMPGMH
VNGAPQMMPPSQMGGGVPGPMAGQGPMPGQGPMPGPGPLGPGGGMQPQMGIPQGGPVPMD
RGAGSLQDSPVGSSGPAAIERPQVPMVDPRAPMRGAPQGIPPRGLLGDGPNDPRGGSLVN
VGDVEPRGYMGVPPPHQGPPMHIAPPDMRGPHEMRGAAMLGEPRGPMMDQRGPPMDSRAP
IPPGRDPRAVEPRGPVAGQRVPVVGGMQGAPSHAMPSNTPPAARPGPPPEVSSQDHEKAA
LIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtagcaacagctgtggccgcagctgcgggaagagaccctgcggtagaccgc
tccttacgatctgttttcgtgggtaatatcccatatgaagcaacagaagagcaactgaag
gacatcttctcagaagttggacttgtcgtcagtttcaggttggtatacgacagagaaaca
ggaaaaccaaaaggttatggcttctgcgagtaccaggaccaggagacggcactcagcgcc
atgcgcaacctcaatggcagagagttcagtggccgagcactgcgtgttgacaacgcagcc
agtgagaaaaacaaagaagagctcaagagtttgggcactggggctcccatcatcgaatca
ccatacggagacagctgcccagctgaggaggctccagagtccatcagcagagcggtggcc
agcctgccaccagagcagatgtttgaacttatgaagcagatgaaactgtgtgttcagaac
agtccacaagaggccaggaatatgcttctgcagaatccacagcttgcctatgcgctactg
caggcacaggtcgtcatgaggatcgtagaccctgagatcgccttgaaaatgcttcatcgc
caagcatctgtgcagcccataaacccaaacaaccagtcagggcctttgccagtgtctaac
cagcctcatgctcagcccagtgccccggtgtctcagccccagcccatgccaggaatgcat
gtgaatggtgctccccagatgatgccaccttctcagatgggaggtggagtgccagggcca
atggctggacaggggcctatgccagggcaaggccctatgcctggaccagggcctctgggg
ccaggaggtggaatgcagcctcagatggggattcctcaaggaggccctgtccctatggat
aggggtgcaggaagccttcaggactctcctgtaggatcatctgggccggctgctatcgag
cggccgcaagttcccatggtagacccacgggctcccatgagaggagcccctcaagggatt
ccaccaagaggcctgttgggtgatggtcctaatgacccgcgaggtggatcactagtaaat
gtgggagatgtggagccccgtggttatatgggggtccctccaccacaccaggggccacca
atgcatattgctcctccagacatgcgtggaccccatgaaatgagaggagcagccatgttg
ggagagcccagaggcccaatgatggatcagcgtggtccacccatggactctagagcccca
attcctccaggccgtgatcctcgagctgtagaacctcggggtcccgttgcaggccaaaga
gttcctgtcgtgggtggaatgcagggtgctccttctcacgccatgccatcaaacactccc
ccagctgcccgacccggtcctccacctgaggtgtcctctcaagatcatgaaaaggctgct
ctaattatgcaggtgctgcaactgactcctgaacagatcgccatgcttcccccagagcag
aggcagagtatcctcatccttaaggagcagattcagaaaactgctggtgccccttga
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