Clarias gariepinus (North African catfish): 128531468
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Entry
128531468 CDS
T10780
Symbol
fbxo38
Name
(RefSeq) F-box only protein 38 isoform X1
KO
K10313
F-box protein 38
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128531468 (fbxo38)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128531468 (fbxo38)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
128531468
NCBI-ProteinID:
XP_053361296
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All DBs
Position
10:complement(15268076..15422191)
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AA seq
1094 aa
AA seq
DB search
MMSPRRKSTKISVAGGSNCSSFQKEELKDYINELSHEVLCHIFRYLPMPDIMCMECLSRK
LQEAVTLYLRVVKTVDLCASRWWEYMPSGFTDTNFLTLLKKMPDLEQLYGLHPRYLERRR
VRGYDAFSIPGVLEALQACPSLLGVETSHLELVEAIWNYMPQVHILGKFRNRNGAFPIPT
ENKLTIPAAAKIQTLHLVGVNVPEIPCVSMLRHLYLKWVRLTKPQPFKDFLCVSLRTFVM
RNCAGPTNSLKYVPLVTGLASARNLEQVELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIV
FGACKNALEVDLGYLIITAAHGLREVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVD
EFLLQCKLSHTELVKYGLADVIENPGIITDVGMKAVNEVFPSIKYLVIYNCPHLHNPHSW
ITDHSRWSRLLDLTLTRCHAIKLESFSQCIEMLPNLEFISLDQMFREPPKGCARVGLSAG
TGIGVSSALVSNQNPNQNNNNNHQNNNEANIQPHNRDNAVDMAPHRVEAEIQEVEGLMVE
NIEVEPQVIDAGQEKESKESSQASDQDDEQAGPSGLQPIIKKIPAVVSDSDSDDDEAVDK
SQGTFCFPQKYHKANIQEKTDDLDKLATRDKGKTPLRRWGTQYPSCEKACQVTSEQIKAD
IKAANETTVDVGQDKNNGGCVCSVDWRVKSGNLGRPRDAGERNESNLRAYCTCSRTNLGT
EGSTHATLNQPGGEESRSFYHIPKQRAKVEPTAIGHQDTVVSHTTSKNMFSSRPMTRACS
RLCSDSAPDSGLSKPMARITVKRKHTADKSTSTSDPVTEDDHVQVLTLKSKNLVGITLSN
CGITDLVVKNCPKMMFIHATRCRVLKHLKVQDTPIINRFDYAQCKKLDIEQVLDQVLRIP
AERNRIIYLRPMKQIDSLSLERKLFSGPYPYHIAIIHEFSNPPNVRNKVRVRSWMDTVAN
ISQELIKNEFFPEAQRTEADIEKYPNYPWGRDIYTLEGVVDGAPYSMISDFPWLRSLRIA
VPNFYARCDLEDDESTTVYAPRCKGQLSADICMETIGEEISERRQMQLGVFQRVVVIFIH
YCDMHGEPVEDDYI
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccctaggcgaaaatccactaaaataagtgtggctggaggatcaaattgctct
tctttccaaaaagaggaactaaaagattacataaatgagctttcacatgaggtgctctgc
catatattccggtatctgcctatgccagacattatgtgcatggaatgtctatcacgaaag
ctgcaagaggcagtaactctatatttgcgggtggtgaaaacagtggatctgtgtgccagc
aggtggtgggagtacatgccttcaggttttacagacacaaatttcctcaccctgctgaag
aaaatgcccgatttggagcagttgtatggtttacacccacgttatttagagcgtagaagg
gtcagaggatatgacgcttttagtattcctggtgttttggaggctcttcaggcttgtcct
agccttttgggtgtggagacatctcatttggagctggtagaagcaatatggaactacatg
ccacaagttcacatccttggaaagttccggaaccgcaacggagcatttcctattcccaca
gaaaacaaacttacaattccagctgcagctaaaattcagacacttcaccttgttggtgtc
aatgtcccagaaattccttgtgtgtccatgctcagacacttgtatctgaagtgggttcgc
cttacaaaacctcaaccatttaaggattttttatgtgtgagcctgcgcacatttgtcatg
aggaactgtgctgggcccaccaactccttgaagtatgtaccactggtgacgggtttggcc
tctgcacgcaatttggagcaggtagaacttgtaagggttcctttcttaggaggactaata
caacatgtggtggaagacagctggaggtcaggaggatttcgcaatttgcacactattgta
tttggtgcttgtaagaatgctcttgaagtggacttaggctacctcatcataactgctgca
catggattgcgtgaggttcgaattcagccttcgttgaccaaagatggggtcttttcagca
ctgaaaatggctgaacttgagtttccacagtttgagactttgcatcttggatatgttgat
gagttccttttacaatgtaagttaagtcatactgaattggttaaatatggccttgctgat
gtgatagaaaacccaggaattatcactgatgttggaatgaaggccgtcaatgaagtgttt
ccctccatcaagtatcttgtcatttacaactgcccacatcttcacaacccacacagctgg
attacagatcattctcgctggagcagattgctggaccttacactaacccgctgtcatgcc
attaagcttgagtcctttagccagtgtattgaaatgctgcccaacctggagttcatctca
ctagaccagatgttccgtgagcccccaaaaggctgtgctcgagttggtctgagtgcaggc
acaggtattggtgtatcgtcagccctagtcagtaaccagaaccctaaccaaaacaacaat
aacaatcaccagaacaacaatgaagccaatattcaaccacacaatcgggacaatgctgta
gatatggcaccacaccgagttgaggcagagatccaggaggttgaaggcctaatggtggag
aatattgaggttgagccacaggtaattgatgccggtcaagagaaggagtccaaagagtcc
tctcaggcatcagatcaagatgatgaacaagcagggcccagtggactacaacccatcata
aagaaaattccagcagtagtgtctgactctgacagtgatgatgatgaagctgttgataag
tcccaaggtactttttgcttccctcaaaagtaccataaggcaaacattcaggagaagact
gatgatttagataagctagccacaagagacaaaggaaaaaccccattacgccgatggggg
acgcagtatccaagctgtgagaaagcctgccaggtgaccagtgagcagatcaaagcagac
ataaaagcagccaatgaaacaacagtggatgttggccaggacaaaaataatgggggctgt
gtctgctctgttgactggagggtaaaatcgggtaatcttggaaggcctcgagatgcagga
gaaaggaatgaaagtaatctaagggcatactgcacttgtagcaggactaacttaggcaca
gagggcagtacgcatgccaccttaaatcagcctggaggagaggagagccgatcattctat
catatacccaagcagagagctaaagtagaacccaccgcaataggtcaccaggatacagtg
gtgtcccatacaacttccaaaaacatgttttctagtcgaccaatgacccgtgcttgcagt
agactgtgctctgactcagcacctgactcaggactttccaaacctatggcaaggattacg
gtgaaaagaaagcacactgcagacaaatcaaccagcaccagtgacccagtgactgaggat
gaccatgtacaggtgctcacattgaaatccaaaaatctagtgggaattacactctcaaac
tgtggcatcacagacctggtcgtgaagaactgccctaaaatgatgtttatccatgccact
cgctgcagggtgctgaagcaccttaaggtgcaggatactcccataataaaccgctttgat
tatgctcagtgcaagaagctggacatagaacaggtcttggatcaggttttacgcatacct
gctgaaagaaatcgcattatctacttgcgccctatgaaacagattgactcactgtccctg
gaaagaaagttgttcagtggtccctacccataccacattgcaattatccatgagttcagt
aacccccccaatgtcagaaataaagtgagagtgcggagttggatggacactgtcgccaac
atcagtcaggaactaatcaagaatgaattcttcccagaggcacaaagaacagaagcagac
attgaaaaataccctaattacccatggggccgtgacatctataccttagaaggtgtagta
gatggagcaccatactcaatgatctcggattttccatggcttcgttctctgcgcattgca
gtacccaacttttatgctcgttgtgacttagaggatgatgaaagcactactgtttatgct
ccacggtgtaaaggacagctttcggctgatatctgcatggagaccatcggtgaggagatc
tcagagcgtcgtcagatgcagctaggtgtgttccagcgggtggttgttattttcatccat
tactgtgacatgcatggagaacctgtggaagatgattatatttaa
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