Clarias gariepinus (North African catfish): 128531505
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Entry
128531505 CDS
T10780
Symbol
gria3b
Name
(RefSeq) glutamate receptor 3b isoform X1
KO
K05199
glutamate receptor 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128531505 (gria3b)
04082 Neuroactive ligand signaling
128531505 (gria3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128531505 (gria3b)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128531505 (gria3b)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
128531505
NCBI-ProteinID:
XP_053361367
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Position
10:11689385..11817007
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AA seq
884 aa
AA seq
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MARLSAVPIFFWLLGRSLAGFPNQINIGGLFMRSTVQEHSAFRFAVQLYNTNQNMSEKPF
HLNYNVDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDKKSMNTLTSFCGALHTSFITPSY
PIDSDVQFVIQMRPPLKGAVLSLLTYYRWEKFVYLYDTDRGFSILQAIMEAAVANNWQVT
ARSVGSVTDPQEYRRILEEMDRRQEKRYLIDCEVDRINVILEQVVTLGKNSRGYHYILAN
LGFANVSLDKVYVGGANISGFQIINPENPVVQQFLQRWDRLDEREFPEARNTPLKYTSAL
SYDAILVIAEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMTGN
IQFDSFGRRSNYTIDVYEMKSGGPRKIGYWNEFERFVNIMDQPYSNDSSSVENRTIVVTT
IMEAPYVMYKKNHMHLDGNDKYEGYCVDLASEIAKHVGIKYRLSIVMDGKYGARDPETKT
WNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD
PLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDETDEAKDPQTPPDPPNDFGIFNSLW
FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED
LAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVARVRKSKG
KFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGL
LDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKS
RAEAKRLKLEKNTQNFKPAPPTNTQNFATYREGYNVYGTESVKI
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcacgattgagtgcggttcctattttcttctggcttttgggcagatctctcgccgga
tttccaaaccagataaatataggtgggctcttcatgcgctcaacggtgcaagaacacagt
gcttttagatttgctgtgcagctctacaacaccaaccagaacatgagtgaaaagcccttc
catctgaactataacgtggataacctggagtcctccaacagcttctctgtcactcacgcc
ttctgctctcagttctccagaggagtctacgccatctttggattctacgacaagaagtcc
atgaacacgctgacctccttctgtggtgccctccacacttctttcatcacgcccagttat
ccaatcgactccgacgtccagttcgtcatccagatgcgcccgcccctaaagggggccgtc
cttagtctcctgacctattataggtgggagaagtttgtgtacctctacgatacagataga
ggattctctatactccaagccataatggaggcagcggtggcaaacaactggcaggtgaca
gctcgatcggtggggagcgtgacggacccacaggagtacaggcgcatcctcgaggaaatg
gacaggaggcaggagaagcgctatctcatcgactgcgaagtggacaggatcaacgtcatc
ctagagcaggtcgtcaccctgggcaagaacagccgaggctaccattacattctggccaat
ttgggcttcgccaatgtgagcctggacaaggtgtatgttggcggcgcaaacataagtggc
tttcaaataatcaatcctgaaaaccctgtcgtgcagcagttcctacagcgctgggaccgg
ttagatgaaagagaattcccagaggcgaggaacacacctctgaagtacacctctgctttg
tcctacgacgccatcctggtgatagcagaggcgttccggtacctgcggcgccagcgcgtg
gacgtctcgaggcggggcagtgctggagattgcctggccaatccagcagtaccctggagt
caaggcatcgacatcgagagggctctcaaaatggtccaagtacaagggatgactggcaat
atccagtttgacagtttcggccgcagatcaaactacactatcgacgtttatgagatgaaa
tcaggagggccgagaaagatcgggtactggaacgagtttgagcgctttgtaaatataatg
gatcagccgtacagcaacgattcgtcctcagtggaaaaccgaacaattgtggtcactact
attatggaagcgccgtatgtgatgtacaagaaaaaccatatgcatctggatggcaatgac
aagtatgaaggctactgtgtcgatttagcttctgagatagccaaacacgtcgggattaag
tacagactgtctatagtcatggacggcaagtatggcgcccgcgacccagagaccaagacg
tggaacgggatggtgggtgaactagtatatgggagagcggacatagccgtcgcaccactg
actattacgcttgttcgagaagaagtcatcgatttttcaaagcccttcatgagcttgggc
atttctatcatgatcaagaaacctcagaagtccaagccaggtgtgttctccttcctggac
cccctggcgtacgagatctggatgtgcatcgtcttcgcctacatcggcgtgagtgtggtg
cttttcctcgtgagccgcttcagtccgtacgagtggcatctggacgagacagatgaagcc
aaagacccccagactcctcctgacccgcctaatgactttgggatttttaacagcctgtgg
ttctctctcggtgcattcatgcagcagggctgtgatatctcaccaaggtccttatcgggc
agaatagtgggaggtgtctggtggttcttcaccctcatcatcatctcgtcctatactgct
aacctggctgccttcctcactgttgagagaatggtctcacccattgaaagtgcagaagat
ctagccaaacaaacagaaattgcatatggaacgctggactcaggttctaccaaagagttc
tttaggcgctcgaaaatagcagtgtatgaaaaaatgtggtcatacatgaaatctgccgag
ccatctgtttttgccaagaccacgccggatggggtggcccgggtgcgaaagtcgaagggc
aagtttgcctttctgctggagtccaccatgaacgaatacatcgagcagaggaagccgtgc
gacaccatgaaagtcggaggaaatctcgactctaaaggctatggtgtggcgacccccaag
ggctcagcattaagaaacgctgttaacctggcagttttaaaactgaatgagcaaggcctc
ttggacaaattgaaaaacaaatggtggtacgacaagggagagtgcggcagcgggggaggt
gactccaaggacaagacaagtgctctgagtctgagtaatgtagctggagtcttctatatt
ctggttggtggtctggggctggccatgatggtggctttaatagaattctgttacaagtca
cgtgctgaagctaaaaggctgaaacttgaaaaaaacacccaaaactttaagcctgcgcca
ccaaccaacactcagaactttgctacataccgagaaggctacaatgtgtatgggacagag
agtgttaagatctag
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