Clarias gariepinus (North African catfish): 128531519
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Entry
128531519 CDS
T10780
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128531519 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128531519 (atrx)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128531519 (atrx)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128531519 (atrx)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128531519 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128531519
NCBI-ProteinID:
XP_053361403
LinkDB
All DBs
Position
10:12007149..12052551
Genome browser
AA seq
2077 aa
AA seq
DB search
MSTESGRPSKLTALVTKLHEYLDHCPEEEPAASQVNEISSGNMASSESNVNDEIMEKPSC
STDLPKATPRSKRKPAVVTKHTVVNEPESVDECEQECVAESANDGTAEIDEIPDDVVVVK
PEPVNNEGKDEFKGPEFRNKGGSKVKEEGQRRRPSEHLEEIRCSRVNCTACGQQVNHFQR
DSVYQHPVLKVLLCKSCFKFYMSDDISKDDDGMDEQCRWCAEGGNLMCCDYCSNAFCKTC
ILRNLGRKELSGIMNEDNKWRCYVCQPEPLQDLVVACDKVLRNLECMQKPKGDQDRARRD
GVKHKQGKVKNTLNGKDANSDGSGTFTFSYKALKVPKELVKKTKKLIETTNGLNSTFVQF
IKQEPVYLGDNTVRPRHLKAFRSVLADLKKVHATLEEALDEEFRDLEVQNGEGNGLADNV
KVANAVPNSEHVDKSKDDQVVLDAKTDQDPTVLKVSMDEKNVVETTNKAEPSEENPEGGF
KGNEANANVAKTEPECENDNSAAGEASLDKDIVSVPPSVPEELFEMVESLSDCVKQEGDK
ESLDSTDSTSSKTSDKKSTASSRRSAKMSKKLVIKLTPIPLKSTKKDESKMQSKDKDGAL
SPDESRRSPRMKTTPLRKSSEGRKKSRSDDTKANDEDCDTSQIPVSVGMSDSDSDEVPEV
LRQVEGMEVSSEEQEVEPNGKATGNSKAKKSADQSSERTAKRKLIASSSDSESDSGVKSS
KAKKRAAKKKKGKESDSSNHDSDLEKEIKSLRNLSAAKRSSKRGKKQANESKKDENEEGD
EGKKGNEGKKEEGDNKKEGKKGRKRSFERKRRSQKSKENVTEESSSSDDEDDDDEEEEQA
ADSGQDSGDQQKIKPIFESVMPHVDAFQQSSEDEAQVKEELSQIVDDDDDPENRIAKKML
LAQIKANCSTEDDSSSEDEDCQKDKEERSTTKEKNEGSSEGEEEEEDSDSGSEVDGKKAG
RRHKLLRKKLSLSEGESDNDKPAKSNKEVKRRGRLKVSSDDSADSDFHRSGSASGSESAL
SEGVSEDDEDSKNNKRRTRSSKKAEKDGERSYQKEKKKKRRRIKVQDDSSSSKSAEEGED
DEGGEEDEKGTPKGRKKIRKILKDDKLRSETQNALKEEEERRKRIAEKERLREKLRETIV
VEESSQIACPITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFIWDCCCESVKKT
KKSAGSGCILAHCMGLGKTLQVVTFLHTVLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQ
EGLKDEECLEVTELATVKRPQERAYALQRWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKE
TFQKTLVNPGPDFVICDEGHVLKNEASAVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMV
NFIKENLLGSVKEFRNRFINPIQNGQCADSTMVDVRIMKKRAHILYEMLAGCVQRRDYTA
LTKFLPPKHEYVLAVRMTPVQCKLYRYYLEHFTGVGSALEGGKGRAGTKLFQDFQMLSRI
WTHPWCLQLDYISKENKGYFDEDSMDEFIASETEESSMSLTSEDEKPKRKKKRGRGKGES
SDKSDSDDVEVIKEWNTSSRGGNPEGRNRAEPVEEVVRASSSGPGSPSPDWYKEFVTEAD
AEILEHSGKIVLLFEILRMAEALEEKVLVFSQSLISLDLIEDFLELAGRAKEEEKPSPYK
GEGKWFRNIDYYRLDGSTNALTRKKWAEEFNDTSNVRGRLFLISTRAGSLGINLVAANRV
IIFDASWNPSYDIQSIFRVYRFGQVKTVYVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQ
QQIERHFTMNELTELYTFEPDQLDDPSEKKSKRSTPMLPKDPFLAELLQNFKDQIVGYHE
HDSLLDHKEEEALSEEERKAAWAEYEAEKKGLSMRFNQPTYPQVGIGSSSYFPFNVAALA
SMSNQQLEDLINQGRQKVLEATNALKALPREPFEDIVGQVWKENPNLSETQVQSMALARQ
AAIDMELKHRESVYRDILNKQQTLMMYVQKVIANRKVQEQQLALARQGLLMNQLAIQNGI
AGGMNQMDLLGLYQQLGALQGLPTSQIGKNPGPSKGL
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaagtggcagacccagtaagctgactgctttggtgacaaaactccatgaa
tacttggatcattgtccagaggaagaacccgctgcatctcaagttaatgaaatctccagt
ggtaacatggcctccagtgaatcaaatgttaatgatgaaataatggaaaagcccagctgt
tcaactgacctcccgaaggccacgccgcgctccaagagaaaacctgcagttgtaacaaag
catacagtcgtaaacgagcccgagtccgtcgatgaatgtgagcaagagtgtgtggctgaa
agtgcaaacgatggcacagctgagatagacgagatcccagacgatgtagttgtagtgaag
ccagaacctgttaacaatgaagggaaagatgaattcaaaggcccagagtttcgtaacaaa
ggaggaagcaaagtcaaagaagagggtcaaaggaggcgtccttcggagcatcttgaagag
attaggtgctcaagagttaattgcactgcatgtgggcagcaagtcaatcatttccagagg
gactctgtgtatcagcatcctgtactcaaagttcttctttgcaaatcttgtttcaagttt
tacatgagtgatgacatcagtaaggatgacgatgggatggatgaacagtgcaggtggtgt
gctgaaggaggtaatcttatgtgttgtgactattgtagcaacgcattttgcaaaacatgt
attctgcgtaaccttggaagaaaggagctctccggaatcatgaacgaagacaacaagtgg
cgctgctacgtgtgccaacccgagccgcttcaagaccttgtcgtggcttgcgacaaagtt
ctgagaaacctggaatgtatgcagaagccaaagggagaccaagacagagcgagacgcgac
ggcgtgaagcacaaacagggcaaagtgaaaaacactttaaacggaaaagacgctaattcc
gacggatcagggacgtttaccttttcttacaaagcattgaaggttccaaaagagctggtc
aaaaagacaaagaaactgatcgagacgaccaacggcctgaacagcacgtttgtgcaattc
atcaagcaggaaccggtctaccttggtgataacaccgtccgacccaggcatttgaaagcg
ttcagatccgttttggccgatttgaaaaaggtccacgcgactttagaggaggccctagat
gaagagttccgagacctagaggttcagaacggagaggggaatgggttggcggataatgtg
aaagtggcgaacgcagtccccaattctgagcatgttgacaagagtaaagatgatcaggtg
gttctggatgcgaagacagatcaggatccaacagtgttaaaagtctccatggatgagaaa
aacgtagtggaaaccacaaataaagcagaaccctcagaggaaaatccagagggtgggttt
aaaggaaatgaggcgaatgcaaatgttgcaaagactgaacctgaatgtgagaatgacaat
tcagcagctggtgaagcctctcttgacaaagacattgtgtctgtaccaccgtctgttcct
gaggaactctttgagatggttgagagcctttcagattgtgtaaaacaagaaggtgacaag
gagtctctggattcaacagacagcacatcaagtaagacgtctgacaaaaagtcaacagca
tccagtagaaggtctgcaaagatgagtaaaaagcttgttataaagctcacccctatcccc
cttaaaagtactaagaaagacgagagcaagatgcagtcgaaagacaaggatggtgctctg
tcaccggacgaaagccgccgttcacccaggatgaaaacgacccctctacgcaagtcgtcc
gaagggaggaaaaagagcaggtcagatgatacaaaagcgaatgacgaagactgcgacact
tcacagattccagtttctgtcggaatgtcagactctgactcggatgaagtcccagaggtc
ctgcgccaggtagaaggcatggaggtcagctcagaagaacaggaggtggagcctaacggc
aaggctacgggcaacagcaaagcgaaaaagtcagctgatcaatcctctgaaaggacggcg
aagcgcaagctcatcgcgtcctcctccgattcagaatcggattcgggcgtgaagtcgtcc
aaggcgaagaaacgagctgccaagaaaaagaaaggtaaagaatcagattcttcaaatcat
gactcggatcttgagaaggagatcaagagtctgaggaacctcagtgctgcgaagagatct
tctaaacgaggcaagaagcaggcgaacgagagtaagaaggacgagaacgaggagggcgac
gagggcaagaaggggaacgagggcaagaaggaggaaggtgacaacaagaaggagggtaaa
aaaggtagaaagagatcatttgagcgaaaacggaggtcacaaaaatctaaagaaaatgtt
acagaagagtcgtcctccagtgacgatgaagacgacgatgatgaggaggaggagcaagca
gcagactccggacaggatagcggcgatcagcagaagataaaacccattttcgagtctgtg
atgcctcatgtggatgcgttccagcagtcatcagaggatgaagctcaagtgaaggaggaa
ctctcccagatagttgatgacgacgatgatcctgaaaatagaattgcaaagaagatgctg
ttagctcaaatcaaagccaattgctcaacagaggacgacagctcctcagaagatgaagac
tgccaaaaagacaaagaggagaggtctacaacaaaggaaaagaatgagggcagctctgag
ggtgaagaggaggaagaggactcggactccggctcggaagtggacggtaaaaaggccggc
cggagacacaaactgcttcgcaagaaactgtcacttagtgagggcgagtctgacaacgat
aaaccagccaagagcaataaagaggtcaagaggagaggaagactaaaagtgagcagtgat
gactctgctgattcagacttccatcgttcaggctccgcgtcaggaagtgagtcagcgctg
agcgagggagtgagtgaggacgacgaggacagcaagaacaacaaacggagaacgcgatcc
tccaaaaaagctgaaaaagacggcgaaaggagttaccagaaagagaagaagaaaaagcgg
cggcggattaaggttcaagacgactcctcgagcagcaagagtgcggaggaaggggaagat
gatgaaggtggagaagaggatgaaaagggcacgccgaaaggccgcaagaagatccggaaa
atcctgaaagatgacaagctgcgctccgagacccagaatgctttgaaagaggaggaagaa
aggcgtaaacgaatagctgaaaaagagcggctgagagaaaaactccgagagacaatcgtg
gtggaggaatcctcacagatcgcctgtcccattactactaaactggtgcttgatgaggac
gaggagaccaaggagccactcgtccaagtccacagaaacatggtgacgaaactgaagcct
catcaagtggatggtgtgcagtttatttgggattgctgttgcgagtctgtgaaaaagacg
aagaagtcagctggctctggttgtatcctggctcactgcatgggtctgggcaaaaccctt
caggtggtgacgtttctccacaccgtgctgctctgcgagaaactcaacttctccacggct
ttggtggtgtgtccccttaacaccgtcctcaactggctaaatgagttcgagaagtggcag
gaaggcttaaaggatgaggagtgcttagaggtgaccgagctggccacggtgaagaggcct
caagagcgagcatatgctctgcagcgctggcaagaagacggtggcatcatgatcatcggt
tacgaaatgtaccgcaacctaacgcaagggcgcaacatcaagagcaaaaagcttaaagag
acattccaaaagacactcgttaacccaggtccagactttgtgatatgtgacgagggccac
gtgttaaagaacgaagcctcggccgtatccaaagccatgaactccattaagacccggcga
cgagtggtgctgactggaacgccacttcagaacaacctaatcgagtaccattgcatggta
aacttcatcaaagaaaacttgctgggctctgtgaaagagttcaggaaccgtttcatcaac
cccatccaaaatggccagtgcgccgactctacgatggtcgacgtgcgcatcatgaagaag
cgagcacacattctctacgagatgctggcaggatgcgtccaaagaagagactacacagca
cttactaagttcctgccacctaagcacgagtatgtgctggctgtgcggatgacgcccgtg
cagtgcaagctgtacagatactatctggagcactttacaggtgttggttctgctttggag
ggggggaaaggccgggcaggcacgaagcttttccaggatttccagatgctcagcagaatc
tggacacatccttggtgtctccagctggactatatcagtaaggaaaacaagggttacttt
gatgaggacagcatggatgaatttatcgcctctgaaaccgaggagtcatcgatgagcctg
acctctgaagatgaaaaaccaaaaaggaagaagaaacgggggaggggcaaaggtgagagc
tcggacaagtccgacagtgacgacgtggaggtgattaaggagtggaacacaagctcccgt
ggaggaaacccagaggggaggaatagagcagagcctgtagaagaagtagttcgcgccagc
agttctggcccgggcagcccgtctcctgactggtacaaggagtttgtgaccgaagcagac
gccgagattctggaacactccggaaaaatagtgctcttgtttgaaatcctgcgaatggca
gaagccctggaagaaaaagttttggtgttcagtcagtctctcatttcactggacctcatt
gaggatttcctggagttggccggcagagcgaaagaggaagaaaaaccctctccttacaaa
ggtgagggcaaatggttcagaaacattgactactaccgtctggatggttctactaatgcc
ttgactaggaagaaatgggctgaagaattcaatgacaccagcaacgttcggggtcgtctt
tttctcatctccacaagagctggctctctgggaatcaacctagtggcagcaaacagggtc
attatctttgatgcctcatggaacccgtcttatgacattcagagcattttcagagtctac
cgctttggccaagtgaaaacagtgtatgtctacaggtttttggctcagggaaccatggag
gagaagatttacgacaggcaggtgaccaaacagtccctgtcattccgtgtggtggaccaa
caacagattgagcgccacttcactatgaacgaactgactgaactttacacttttgagcca
gaccagctggacgatccatcggaaaagaaaagcaagcggtccacacccatgttacccaag
gaccctttcctggccgagcttcttcagaacttcaaagatcagattgtgggttaccacgag
cacgattccctgctagaccacaaagaggaggaggctctgagtgaggaggaaaggaaggcc
gcctgggccgagtatgaggcagaaaaaaagggtctgtccatgcgcttcaaccagccgacg
tatcctcaagtaggcatcggatcgtcgagctacttccccttcaacgtggcagctctggcc
tccatgtccaaccagcagcttgaggacctgatcaaccagggtcgacagaaggtgttggaa
gccaccaatgctctgaaggctttgccccgggagccgtttgaggacattgtcgggcaggtg
tggaaggagaatccgaatctgtcagaaacccaggtgcagagcatggctctggccagacag
gcagccatcgacatggagctgaagcacagagagtccgtgtaccgagacattctcaacaag
caacagacgctgatgatgtatgtgcagaaggtgatcgccaatcgcaaggtccaggagcag
cagctggcgcttgccagacaggggcttctgatgaaccagttagccattcagaacggcatt
gctgggggaatgaatcagatggacctgctcggtctgtaccaacagctgggtgccctccag
ggtctgccaacctctcagataggcaagaaccctgggccgtcaaagggcttgtag
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integrated database retrieval system
