KEGG   Clarias gariepinus (North African catfish): 128531585
Entry
128531585         CDS       T10780                                 
Symbol
sf3b2
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128531585 (sf3b2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgar03041]
    128531585 (sf3b2)
Spliceosome [BR:cgar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    128531585 (sf3b2)
 Complex B
    128531585 (sf3b2)
 Complex C
   U2 SnRNP specific factors
    128531585 (sf3b2)
SSDB
Motif
Pfam: DUF382 PSP SAP FancD2
Other DBs
NCBI-GeneID: 128531585
NCBI-ProteinID: XP_053361524
LinkDB
Position
1:20379271..20390245
AA seq 862 aa
MAADGVAESNLELSSWSVPELQAKLAEIGAPVLGPREELIDRLKSYTMQTGAMLTKPSLV
GGDDKTMPTIPGLPPMPPMPSMPLPPGMGVLQAMGMMGGPPPPGIRMSMEPPGVSSGMAQ
DDPQKMVQRAGQGDSRVMDEQLKEQELLEQQKRAAQLLEHERQQELVKLQQTGPPGTRVP
GPGPNLLPPIPPLRVLTTSAPPPPGVSMISQSNQKQRVPPPPGEDAREMWQSDDVGIGPK
IPQALEKILQLKEIRQEQLTAAPTEDDDEDTADMDMNSSRPYSDDEDEGTLSKKDKSRRR
RNRKKKKKKNQEKNEQAETRKNDAEKDKEKEPEVEIEYVTEEPEIYDPNFIFFKRIFEAF
KLTDEVKKEKEKEPEKAEKLEITSYKKKFLEEKKDSDDSDEEAKPDVPKLSKKKLRRMNR
LTVAELKQLVARPDVVEMHDVTAQEPKLLVHLKATRNTVPVPRHWCFKRKYLQGKRGIEK
PPFELPEFIKRTGIQEMREALQEKEDAKTMKTKMREKVRPKMGKIDIDYQKLHDAFFKWQ
IKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRIALGMPTGPNSHKVPPPWLIAMQRY
GPPPSYPNLKIPGLNAPIPENCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAIDFQAKAE
EEEVDRTPWGELEPSDEESSEEEEEEESDEDKPDESGFFTPADSGLITPGGFSSVPAGME
TPELIELRKKKIEEAMDGNETPQLFTVLPERRTGPVGSAMMASTHIYEMSAAGAARKVAA
VTGLGGDSQGVEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQ
KKRKGQPQDTRAGAKKYKEFKF
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggcggccgacggagtcgcagagtctaacctggagctgagctcatggagtgtccctgag
ttacaggccaagctggcggagatcggagctccggtactgggtccgagagaagagttaata
gacagactgaagtcttacaccatgcagacgggtgcaatgttgactaaacccagcttagtg
ggtggagatgacaagaccatgcccacgatcccaggtttgccccccatgcccccgatgcct
tccatgcctctgcctccaggcatgggtgtcctgcaggccatgggcatgatgggaggacct
ccaccacctggtatacgcatgagcatggagccgccgggtgtctcctctggaatggcgcag
gacgatccgcagaagatggtccagagagctggtcagggagattccagagtgatggatgag
cagctaaaggagcaggagcttctcgagcaacagaagagagctgcacagttgctggagcat
gagagacagcaggagcttgtcaagctgcagcagacaggaccaccaggcacccgggttcca
ggacctggacccaacctgctgccccctattcctcctctcagagtcttgacaaccagtgcc
ccaccacctccaggcgtttccatgatatcacagagcaatcagaagcagagagtaccacct
ccgcctggagaggacgccagagagatgtggcagagcgacgatgtgggaatcgggccgaag
atccctcaggctctggagaagatcctgcagctgaaggagatcagacaggagcagctcact
gctgcccctacagaagatgatgatgaggacacggccgacatggacatgaacagctctcgt
ccatattcagacgatgaagatgaaggcaccctttctaaaaaggataaaagccgcagacgc
agaaaccggaaaaagaagaagaagaagaatcaggagaagaatgagcaagcggagacgaga
aagaacgacgctgagaaggacaaagagaaggagcctgaggtggagatcgagtacgtcaca
gaggagccggagatctacgaccccaactttattttcttcaagaggatcttcgaagcgttt
aaactgacagatgaggtgaagaaggagaaagagaaggagccggagaaggctgagaagctg
gagatcacatcgtataagaagaaatttttagaggagaagaaggacagcgacgacagcgat
gaggaagccaaaccagatgtgccaaaactctccaagaagaagctaagaaggatgaacagg
ctgactgtagctgagctcaaacagctggtggctcgtccggacgtggtagagatgcatgac
gtgacggcgcaggagcccaagctgctggtgcacctgaaggccacgaggaacaccgtaccc
gtcccacgccactggtgcttcaagaggaagtacctacagggtaaaaggggtatcgagaaa
ccacccttcgagctgcctgagttcatcaaacgcaccggcatccaggaaatgagggaggcg
ctgcaggagaaggaggatgctaaaactatgaagaccaaaatgcgagagaaagtccgtccg
aagatgggtaagatcgacatcgactaccagaagctccacgacgccttcttcaagtggcaa
atcaaaccgaaactcaccatccacggagacctttactatgagggtaaagagtttgagaca
cgactgaaggagaagaagccaggagatctgtctgatgagctgagaatcgctctgggcatg
cccacaggccctaactcccataaggttcctcctccgtggcttattgccatgcagagatac
ggtcctccgccttcctaccctaatctcaagatccctggcctcaacgcccccattcctgag
aactgctcgtttggttatcacgctggaggatggggtaaacctcccgtagacgagactgga
aaacctctttacggagacgtgtttggtaccaacgctattgacttccaggccaaagcagag
gaggaggaagtagaccgaaccccgtggggtgaactcgaaccgtcagacgaagagtcttca
gaagaggaggaagaagaagagagtgacgaggacaaacccgacgagtccggtttcttcaca
ccggccgacagcggtttaatcactccaggtggcttctcctccgttcctgctggcatggag
actccagagctgattgagctcaggaagaaaaagattgaagaggcgatggatggaaacgaa
actcctcagttgtttacggtgctgccagagagacgaactggccctgtgggatcggccatg
atggcgtccacacacatctacgaaatgtctgcggcgggagctgcgcgcaaggtggctgca
gtaaccgggttgggaggagactcccagggtgtggaggtggctctggctcccgaggagctg
gagctcgatccgatggctatgacgcagaagtacgaggagcacgtgcgcgagcagcaggct
caggtggagaaggaggacttcagcgacatggtggccgagcacgccgccaaacagaagcaa
aagaaaaggaaaggccaaccccaggacactcgcgccggagccaagaaatacaaagagttc
aagttttaa

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