Clarias gariepinus (North African catfish): 128531618
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Entry
128531618 CDS
T10780
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128531618 (aff2)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128531618 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
128531618
NCBI-ProteinID:
XP_053361610
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All DBs
Position
10:complement(7889995..8130645)
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AA seq
1284 aa
AA seq
DB search
MPRFLPSGDVVTPLMQTGILATRGPLSLLAINPIPELPNQETHYEQDRSALKKKEWERRT
QEVQQDEDLFSTGFNLFGEPYKTNKGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIP
KNSVPQTPVEKTDQPTFFTEAQRGRAASSQPANHTTSMPPPPTTNMAGPSILHGHQSTKK
SRSSDWSRGAHGPGSSQATQAASRGKQSSSGHEQEQGDSSPGTSSMSTHPSRRHGQPAKV
PTVASSPCEQDSGSPVASTSLVPGGLSTPTFPQGLHCKPSSGGQQKPTAYVRPMDGQDQA
PSDSPELKPTLEITDGYGGTPFTSLIDGKGNAVGSKGKLPKLTLPQSGEVSLPNDSSCVE
EILREMTHSWPPPLTAIHTPGKAEQTKFPIPNKDPQHVTPAYNGQKRCTVPSNKPSTKPV
PQKSMLEDDLKISSDEEDSEQAAEKPKTRSTPPNLPGPTPRSSDPGGHSSGASGSSSESE
SSSESDSDSESSSSDSECNRASRATTPEPEPQSTNKWQLDKWLNKVHPHNKPLANTQSES
HGLGSSQPEDGQATENQSCSKSKPSAALAQTDAKDRALLSPVREKAKPKTGQKGPDGKGA
KVKPPASIDLPPSRRSTGKKQPKKIEQSSSSEEHNWPRPGNSSTTPKEKEPPPLEPPKPR
GKAPGGKTAPRKEPRSTTVTTPAAPTTSTISTAPDKKKHRGPSKIIPKSKEFIETESSSS
ECHSDTEDLSKVLLPCPGPSSLNFKSKDCNSNILSVSSLASTSSTSIPDPAATDLLEEPL
FSPISMVQNELLSPLRDFEDIKSLWVKIELSLLSRIPGQDPPEPLPVKAECRETSFKHRR
QQSPASIPSEKPANKSKRKHKSDHCEVLSGTKKLKVEKEALLLPPCISPIHNHKVSNTKD
SSKKQPRKLLPPLLSPLSDEPVGRQRRSSESSSLSMEGSTAVPTTLPPTHSLPPSSSLSS
SSSSHKHRKGESKSHSKTSSQEEDSHAKTSGGFHANGQSESSVWPNPSGLSVENMEHRRP
KLTFNNTVHNADYYMQEAKKLKHKADALMEKFGKAVNYADGALSFIECGNAMERDPLEAK
SPYTMYSETVELIRYAMRLKNFTSHSATLAEKKLAVLCNRCLSLLYLRMFKLKKDHAMKY
SRSLMEYFKNSAKSSQAPSPWGSNGKTTGTPSPMSLSPSPISSVNSNAGAMVSSSSSSSS
SSSGSVAIPQRIHHMAASHVNITNNILRSYEHWDTAEKLAHESQEFFQELDSVMEPLTQH
SSMTDLVRYIRQGLHWLRIEAHLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgccgagatttctcccctcaggcgacgtcgtcaccccactcatgcagactggcatcttg
gcgacgaggggccctctatcgctcctcgcaatcaatcccatcccagagcttccaaatcaa
gaaacccattatgagcaggaccgttcagcgctgaagaagaaggaatgggagcgtcgcaca
caggaagtgcagcaggatgaagatttgttctccaccggcttcaatctgttcggtgagcca
tacaagacaaacaaaggtgatgccctggccaaccgagttcagaacacattgggtaattat
gatgagatgaaggagctcctgaccagccattctaaccaaagccacctggtgggcatccct
aagaactcagttccacagaccccagtggagaaaactgaccagcccaccttcttcaccgaa
gctcagcgtggcagagccgcctcatcccagccagccaaccacacgacctcaatgcctcct
ccacctaccaccaacatggcaggtccaagcatccttcatggacaccagagcaccaaaaag
tctcgttcctctgactggtctaggggcgcacacggtccaggtagcagccaggcgacacaa
gctgccagccgaggaaaacaaagctccagtgggcatgaacaggaacagggtgactcgagc
cctggtacttcatccatgtccacacaccccagcaggaggcatgggcagccagccaaggtg
cccactgttgccagctcaccctgcgagcaggactcagggtcaccagtggcctcgacttct
ctggtgcccggtggtctgtccacgccaacattcccccagggactgcactgcaagcccagc
agcggaggacagcagaaacccaccgcctatgtccgacctatggacggccaggaccaggcg
cccagtgattctcctgaactcaagcccactctggaaatcacggatggatacggcggaaca
ccatttacaagcctgatagatggcaaaggcaacgcagtagggagcaagggcaaacttccc
aagctgacgctccctcaatcaggggaggtcagtctgcccaatgactccagctgtgtggag
gagattttgcgggaaatgacccattcctggcctcccccgctcactgccatacacacaccg
ggcaaagcagaacagaccaagtttcccattcccaacaaggacccccaacacgtcacacca
gcatacaatggacaaaagcgctgcacggttcccagtaacaagccctcgaccaagccggtc
ccacagaagtcaatgctagaagatgacctgaagatcagcagcgatgaagaagacagcgaa
caggctgcagagaaacccaaaaccaggagcacacctccaaaccttccagggcccacacca
cggagcagcgatccaggtggccactccagcggggcttctgggagttccagtgaatcagaa
agcagctccgagtccgactctgacagcgaaagcagttccagtgacagcgaatgcaaccga
gcgtcccgcgccactacaccagagcctgaaccacaatcaacaaacaagtggcagctggat
aaatggttgaacaaagtccatcctcacaataagccccttgcgaacacacagtcagaaagc
catggacttggaagctcccagcctgaggatggccaagctacagagaaccaaagctgtagt
aagagcaagcccagtgcagctctggcacaaacagacgccaaagaccgggccttgctcagt
cccgtcagagaaaaggccaagcctaaaacaggccagaaaggtccggatggtaagggtgct
aaagtgaagccccccgcttcaatagatctgcctccttcgagaagaagcacaggcaagaaa
caaccgaaaaaaattgaacagtcctccagcagtgaggagcacaactggcccagacctggc
aactccagcactaccccaaaggaaaaagaacctccacctttagaacctcccaaacctaga
ggcaaggccccagggggcaagactgcccctagaaaggaacctcgatcaactacagtaacc
acacctgctgcccccaccacctcgactatcagcacagctccagacaagaaaaagcacaga
gggccgagtaagatcattcccaagtcaaaggagtttattgaaacagagtcgtcatcatca
gagtgccattcggacactgaggacctttcaaaagtgcttcttccctgccctggccctagc
agcctgaactttaaatctaaagactgtaacagcaatatcctgagtgtcagcagtcttgcc
agcaccagcagtacctccatacctgacccagcagccactgatctactggaggagcccctg
ttctcccctatctctatggtccagaatgagcttctgtcaccgcttcgagactttgaggac
atcaagtccctttgggtcaagattgaactcagcctactgtcacggattcctgggcaggat
ccacctgagccactccctgtaaaggctgagtgtcgagagaccagcttcaagcacagaaga
cagcagtcacccgcctccataccatcagagaaacccgccaacaagtcaaagaggaaacac
aagtcagaccactgtgaggtgttaagcgggaccaagaagttaaaagtggagaaagaggcc
ctgctcctccctccctgtatctctcccatccacaaccacaaagtctccaacacaaaagat
tcttcgaagaaacagccgaggaagctccttccacctctcctctccccgttgtcggacgag
cccgtgggccgtcaaagaagaagcagcgagagcagttctctcagtatggaaggaagcaca
gcagttcctacaaccttacccccgacacactcactcccaccttcttcctctttgtcatcc
tcatcgtcgtctcacaagcaccgcaaaggagagagcaagtctcactcgaagaccagcagt
caggaggaagacagccatgcgaagacctccgggggtttccacgccaatggtcaatccgaa
tcgagcgtgtggccgaacccgtcgggtctgtccgtggagaatatggagcacaggagacct
aaactcaccttcaacaacactgttcacaacgcggactactacatgcaggaagccaagaaa
ctaaagcacaaagctgatgcgctgatggagaagtttggcaaagctgtcaattacgcagac
ggtgcgctctccttcatcgagtgcgggaacgccatggaacgagacccgttagaggccaag
tcgccgtacaccatgtactcggaaaccgtagagctcattaggtacgcgatgagattaaag
aacttcaccagtcactcagccacgctggcggagaagaaattagcggtgctctgcaatcgg
tgtttatccctgctgtacttgcggatgttcaaactgaaaaaggatcacgcgatgaagtat
tcacgctccttaatggagtacttcaagaattcagcgaaaagttcccaagcaccttcacca
tggggctcaaatggaaagaccacaggaacaccgtctcccatgtccctgagtccttccccc
atcagctcggtcaacagcaacgccggagccatggtttcttcctcctcgtcctcttcctcc
tcctcctcagggagcgtggccatcccgcagcgcatccaccacatggccgccagccacgtc
aacatcaccaacaacatcctgcgcagctacgagcactgggacacggccgagaagctggcc
cacgagagccaagagttctttcaggagttggactcagtgatggagcccctgacgcagcac
agcagcatgactgacctggtgcgctacatccgccaaggactgcactggctccgcatcgag
gcacatttgttatag
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