Clarias gariepinus (North African catfish): 128531690
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Entry
128531690 CDS
T10780
Symbol
gria1a
Name
(RefSeq) glutamate receptor 1a
KO
K05197
glutamate receptor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128531690 (gria1a)
04082 Neuroactive ligand signaling
128531690 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128531690 (gria1a)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128531690 (gria1a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
128531690
NCBI-ProteinID:
XP_053361739
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All DBs
Position
10:17487785..17601058
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AA seq
911 aa
AA seq
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MQRSIALLCTSVIGLCFGSSFPSNINIGGLFPAESHEYEVFRFALSHHQDIPKLVPQVDM
VKMGNSFSMTYAFCSQFAKGVYAIIGVYDRKTVSMLMSFCGALHVCFVTPSFPIEASNQF
VIQLRPELQDALVGAIEHYKWTKFVYMYSSDSGLIVLQKVLDTAAERNWLVTSVNVETMT
EASFLKVFQDLDNRKEGQIIIDCELECLSSILKKIVGLGKNLKSYHYILANLGLMDVDLT
HFKKGEANVTGFQLVNYADPGVSRIVQQWMDFDNKDSKVPKKRFKYTGALTYDGVKVMST
AFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIEGVTGHIQFNEKGRRI
NYTINVMELKATGTEKVGYWNEDEKFVSTAAYMSGSNDTYGVQNRTYIVSTILESPYVML
KKNHEKLSGNDKYEGYCVELAAEIAKHVGYIYKLKIVPDGKYGAKDPETKMWNGMVGELV
YGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEWHADDYEENGEASTNQAGTLTGQNAQNQAQQNQEQSNE
FGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMV
SPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSVFVKTTDEGV
FRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNRVNLAV
LKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVA
LVEFCYKSRTESRRMKQSIDDAMHCTTLTRMSGNSSGGENGRIVAHDFPKAVQTLPCMSH
TAAMGLGASGM
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaagcatcgctctgctctgcaccagcgttatcgggctctgctttggttcgagt
tttccaagtaatatcaacataggaggattattccccgccgagtcacacgaatatgaagtg
ttccgatttgcgctttcgcaccatcaggacattcccaaactggtacctcaagtagatatg
gtgaagatgggcaacagcttctccatgacttatgccttttgttcacagtttgcaaaagga
gtgtatgccatcattggtgtgtacgacaggaagacggtgagcatgctgatgtcattttgc
ggcgcactgcacgtctgttttgtgacacccagcttccccattgaggcctccaaccaattt
gtgattcaactgcggccggagttgcaggatgccttggtgggagccattgaacactacaag
tggaccaagtttgtctacatgtatagctctgactcaggactaatcgttctgcagaaggtt
ctggacacagcagctgagcgaaactggctggtgacctcagtgaacgtggagaccatgact
gaagcatcgttccttaaagtctttcaggacctagacaatagaaaggaaggacagatcata
attgattgtgagctagagtgtctcagctccatcctaaagaagattgtaggactgggaaaa
aacctcaagagttatcactacatactggcaaacctgggccttatggacgttgacctgacc
cattttaaaaaaggtgaagctaatgtgacaggcttccagcttgtgaactatgccgatcca
ggtgttagcagaatagttcagcagtggatggactttgacaacaaagactccaaagttcca
aagaaaagattcaagtacactggagctctcacttatgatggtgttaaagtgatgtctaca
gcttttcagaatctccgcaggcagaggattgacatatcacgccgtggcaacgctggtgaa
tgccttgcaaaccctccagccccctggggccagggcattgacattcaaagagctttgcag
caggttcgcattgaaggtgtaacaggacacatccagtttaatgagaaaggtcggcgaatc
aactacaccatcaatgtgatggaactaaaggctacaggaacagaaaaagttggatactgg
aatgaagatgagaaatttgtgagcacggcagcctacatgtctggaagtaacgatacctat
ggagttcagaaccgcacatatatcgtctctaccatcttggaatctccatatgtgatgttg
aagaagaatcatgaaaagttgtcaggaaatgataagtatgaaggctactgtgtggaactg
gcagcagaaatagccaagcatgtgggatacatatacaaactcaagattgtgcctgatgga
aagtatggagccaaagatccagagacaaagatgtggaatgggatggttggggaactggtt
tatggaaaggccgatgttgcagtggcaccactgaccatcacgttggtgagagaggaagtc
attgacttctccaagcccttcatgagcctgggtatttcaattatgatcaagaaaccaacc
aagtctaaaccaggagtcttctcttttcttgacccactggcatatgagatttggatgtgt
atcgtgtttgcctacattggcgtgagtgttgtgctctttctggtcagccgctttagccca
tatgagtggcatgctgatgactatgaggaaaacggagaagccagtaccaaccaggctgga
accttaacaggccagaatgcccagaatcaggcccaacagaaccaggagcagtccaatgaa
tttggcatctttaacagcctatggttttctttaggagctttcatgcagcaaggctgtgac
atctcacccagatctctctcgggccgaatcgtgggtggtgtctggtggttcttcaccctc
atcatcatttcgtcctacacagctaacctggcagccttcctcactgtagagaggatggtt
tcccctatcgagagtgctgaagacttggccaagcaaacggaaatcgcttatggtacactc
gatgctggctcaaccaaagagttctttaggaggtcgaagattgctgtttttgaaaagatg
tggtcctatatgaagtctgccgacccatctgttttcgtgaagactactgatgaaggcgtt
tttagagttaggaagtctaaaggaaagtatgcctacctgctagagtccaccatgaatgaa
tacatcgaacagcgcaaaccctgtgataccatgaaggtgggcgggaatttggactctaag
ggttatggtgtcgctaccccaaaaggatcacccctcagaaaccgagtaaacctggcagtg
ttaaaactgaatgagcagggcctgttggacaaattgaaaaacaaatggtggtacgacaag
ggcgagtgtggcagcgggggaggtgattcaaaggacaagacaagtgcattgagtctcagt
aatgtggctggagttttttacattctaatcggcggcctgggcctggccatgctggtagca
ctggtggaattctgctacaagtcaaggaccgagtctcgcaggatgaagcaatccatcgat
gatgccatgcactgcaccacactgacccggatgagtggcaacagcagcggtggggagaat
ggccgcatcgttgcccatgacttccctaaagctgttcagacattaccgtgcatgagccac
acagccgccatgggccttggagcctcaggcatgtga
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