Clarias gariepinus (North African catfish): 128531710
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Entry
128531710 CDS
T10780
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128531710 (prom1a)
04090 CD molecules [BR:
cgar04090
]
128531710 (prom1a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128531710 (prom1a)
CD molecules [BR:
cgar04090
]
Proteins
128531710 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Motif
Other DBs
NCBI-GeneID:
128531710
NCBI-ProteinID:
XP_053361774
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All DBs
Position
10:6792921..6860853
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AA seq
904 aa
AA seq
DB search
MMCTPVLTLLLLGCCSPAFGAAPALAPAPPAPAPAAAAAAAPLDFGSVPGGVYETVAYYE
PGPIGLLFNMMRAFLHVVQPNPFPQDLVIQVAKDKFGAIKSEYQKPENIVLTLQVIYYEL
GFVVCAVIGILFIVLVPLVGLLFCMCRCCDNCGGEMHQRQRKNADCQRGLLTTLLLTTTF
VITAGVLCAYAANQNLSSQLKTMKRLVNSNLRDFYTFANNTPAQIDYLVSQYGTTKDHVL
FDLENVGQLLGGKIHDGLGKIVLPALDEAQDMAKVIKDTKVALENVNQSLGVLQQGTAQL
QSNLRKVRADIMNALDDPLCADPQSHMVNICVNILSSLSQLEISANYSSLPGVRGQLAKV
KDVLKTNLSQIVFKGSVAFNDTPTMVTDQTSTVAAGVRSLLDVIGNNITRFSKMFPVQTT
VNNVTVFISHTHSQIEDLYPEIDKMDFYRWIGCITLCCMVALILAFNFLGLLCGILGFDR
HASPTTRGCVSNTGGNLLMAGVGFSFMFSWVLMGVVTATFVVGGNVEKLVCEPLHSRELF
KVLDAPNLVNPSWKHFIPGYLYNDPEMDLTVENIYSTCKENRGIYSALRLDRLFNISALL
NTSSYTKDVSTKFDALKVDLNTIVLLNPEGRQNLINFTETGIDEINFAAYMEELSKEVTR
VNLQTFANDLDSQADKLTKGPVQISIKYQANTLRKIFNSQVIPLQESMKYVNARNTMNQS
IRFLERTASDIPDKITKILQVIEEAQYLITHNASFTISQESEKYKQTIIGYFKQYIDWIK
TALMTEVAACKPVSNIVDTAEILACGFFFDSMNTFWFGLGCSALFLLPSIILSVRLAKFY
RRMDTEDVYDDIDTIPMKTMEIGNNGYYNEHVQGIQNPVMSSLPAYDTMTRFPRASAPPR
HGDW
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcaccccggtcctgacgctgctcctgctcgggtgctgcagcccggctttcggt
gctgcccctgccctcgctcctgctcctcctgcgcccgctcctgcagccgccgccgccgcc
gcaccgttagatttcggatcggtaccgggaggagtttatgaaaccgtggcgtattacgag
cccgggccgatcggcctgctgttcaacatgatgcgagccttcctgcacgtggtccagccg
aaccccttccctcaagatctcgtcatccaagtggcaaaggacaagttcggagccatcaag
tccgagtaccagaagccagagaacattgttctgacactgcaggtgatttactatgagctg
ggctttgtggtgtgcgcggtcatcgggattctcttcatcgtgctggtgccgctggtcgga
ttgctcttctgcatgtgccgctgctgcgataactgcggaggggagatgcaccagagacaa
aggaagaacgcggactgtcagagaggcctgctcaccacgctcctgctcaccaccaccttc
gtcatcactgccggggtcctgtgtgcatacgcagccaatcagaacctgagttctcagttg
aagaccatgaagaggcttgttaacagtaacctgagagacttttacacctttgccaataac
acaccagcgcaaatcgattacctcgtgtctcaatatggaaccaccaaggaccatgttctc
tttgatctagaaaatgtaggtcagttgttggggggaaagatacatgatgggctcggaaaa
atagtgcttcctgccctggatgaagcacaagacatggctaaagtgataaaggatactaaa
gtagctctggagaacgtgaaccagtcgttgggggttctacagcagggcacggcacagctg
cagtctaacctaaggaaggtgcgagcggatatcatgaacgctctcgacgacccgctgtgt
gctgacccgcagtcccacatggttaacatctgcgtgaacatcctcagctcgctcagccaa
ctggagatcagtgctaactactcatcgctccctggtgtgagggggcagttggccaaagtg
aaagacgttttaaagaccaacctcagccagatagttttcaaggggtctgtagccttcaat
gacaccccgaccatggtaacagaccagaccagtaccgtagctgcaggagttcgaagtttg
ttggacgtcattggcaacaacatcaccagattctccaagatgtttccggtgcagactacg
gtcaacaacgtcaccgttttcattagccacacacactcacaaatcgaggatctttaccca
gagattgacaaaatggacttttataggtggattgggtgtatcacactgtgctgcatggtg
gcgcttatcttagctttcaacttcctcggtcttctgtgtggaattctgggatttgaccgg
cacgcctctcctacgacccgcggctgcgtgtccaacactggggggaacctgctgatggct
ggtgtgggcttcagcttcatgttctcctgggtgctcatgggagtggtgaccgcgacgttt
gtcgtaggagggaacgttgagaagctggtgtgtgaacctttacactccagagagctgttc
aaggtgttggacgctccgaatctggtgaacccttcatggaagcacttcatccctggctac
ctgtataacgatccagaaatggatctcaccgtggaaaacatttacagtacctgtaaggag
aaccgtgggatttattctgccctgcgtctggatagactgttcaacatctcagccctgctc
aacaccagctcgtacactaaggatgtgtctacgaagtttgatgccctgaaggtggacctg
aatacgatcgtcctgctgaacccagagggcagacagaacctcatcaacttcacagagact
ggcattgacgaaatcaactttgcagcgtatatggaggagctcagtaaagaagtgactcgt
gtcaacttgcagacattcgccaacgaccttgattcccaagctgacaagctgactaaagga
cctgtacagatttctatcaagtatcaagctaatacacttcggaagatcttcaacagtcag
gtcatccctcttcaagagtccatgaaatatgttaacgcaaggaacactatgaaccagagc
atcaggtttctagagaggactgcctcagatataccagacaaaataacaaaaatacttcaa
gtcattgaagaggcacagtatctcatcacgcataatgcaagctttactatcagtcaggaa
agtgaaaaatacaagcagaccatcattggctactttaaacagtatatcgactggatcaag
acagcattgatgacggaagtggccgcgtgcaaacctgttagtaacatcgttgacactgca
gagatactggcctgtggcttcttcttcgactcaatgaacacgttctggtttggtttgggc
tgctccgctctcttcctgctgcccagcatcatcctgtctgtgaggctagccaagttttac
cgcagaatggacacggaggacgtctatgacgacattgacacaattcccatgaaaactatg
gaaattggtaataatggttattataatgaacatgtacaaggtatccaaaaccctgtaatg
tcaagcctccctgcctatgacactatgactcgattcccacgagcctcggcgccccctcgc
catggcgactggtga
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